Literature DB >> 23795115

2-(4-Bromo-phen-yl)-4-(4-meth-oxy-phen-yl)-6,7,8,9-tetra-hydro-5H-cyclo-hepta-[b]pyridine.

Ismail Celik1, Mehmet Akkurt, Hayreddin Gezegen, Canan Kazak.   

Abstract

In the title compound, C23H22BrNO, the cyclo-heptane ring adopts a chair conformation. The pyridine ring makes dihedral angles of 58.63 (15) and 8.27 (16)° with the benzene rings. The dihedral angle between the benzene rings is 56.68 (17)°. The crystal packing features C-Br⋯π inter-actions [Br⋯centroid distances= 3.813 (2) and 3.839 (2) Å; C-Br⋯centroid = 126.25 (10) and 138.31 (10)°, respectively, forming a three dimensional supramolecular architecture.

Entities:  

Year:  2013        PMID: 23795115      PMCID: PMC3685096          DOI: 10.1107/S1600536813013913

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological and pharmacological properties of pyridine-based heterocycles, see: Aida et al. (2009 ▶); Ceylan & Gezegen (2008 ▶); Cundy et al. (1997 ▶); El-borai et al. (2012 ▶); Gezegen et al. (2010 ▶); Girgis et al. (2007 ▶); Hatanaka et al. (2005 ▶); Khidre et al. (2011 ▶); Laine-Cessac et al. (1997 ▶); Menegatti et al. (2006 ▶); Musiol et al. (2007 ▶); Rajanarendar et al. (2012 ▶). For ring conformation analysis, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C23H22BrNO M = 408.32 Monoclinic, a = 10.409 (5) Å b = 10.054 (5) Å c = 18.428 (5) Å β = 94.850 (5)° V = 1921.6 (14) Å3 Z = 4 Mo Kα radiation μ = 2.15 mm−1 T = 296 K 0.58 × 0.42 × 0.26 mm

Data collection

Stoe IPDS 2 diffractometer Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.355, T max = 0.572 28207 measured reflections 3986 independent reflections 3083 reflections with I > 2σ(I) R int = 0.178

Refinement

R[F 2 > 2σ(F 2)] = 0.060 wR(F 2) = 0.119 S = 1.12 3986 reflections 235 parameters H-atom parameters constrained Δρmax = 0.67 e Å−3 Δρmin = −0.42 e Å−3 Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶) and PLATON (Spek, 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813013913/rz5059sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813013913/rz5059Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813013913/rz5059Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C23H22BrNOF(000) = 840
Mr = 408.32Dx = 1.411 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3507 reflections
a = 10.409 (5) Åθ = 2.0–29.7°
b = 10.054 (5) ŵ = 2.15 mm1
c = 18.428 (5) ÅT = 296 K
β = 94.850 (5)°Prism, yellow
V = 1921.6 (14) Å30.58 × 0.42 × 0.26 mm
Z = 4
Stoe IPDS 2 diffractometer3986 independent reflections
Radiation source: sealed X-ray tube, 12 x 0.4 mm long-fine focus3083 reflections with I > 2σ(I)
Plane graphite monochromatorRint = 0.178
Detector resolution: 6.67 pixels mm-1θmax = 26.5°, θmin = 2.0°
ω scansh = −13→13
Absorption correction: integration (X-RED32; Stoe & Cie, 2002)k = −12→12
Tmin = 0.355, Tmax = 0.572l = −23→23
28207 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.060Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.119H-atom parameters constrained
S = 1.12w = 1/[σ2(Fo2) + (0.0476P)2 + 0.6943P] where P = (Fo2 + 2Fc2)/3
3986 reflections(Δ/σ)max < 0.001
235 parametersΔρmax = 0.67 e Å3
0 restraintsΔρmin = −0.42 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.22100 (4)0.14765 (5)0.68332 (2)0.0767 (1)
O1−0.3941 (2)0.0596 (2)0.06337 (14)0.0741 (9)
N10.3068 (2)0.0105 (3)0.32719 (14)0.0564 (9)
C10.1937 (3)0.0478 (3)0.35239 (16)0.0532 (10)
C20.0825 (3)0.0575 (3)0.30651 (17)0.0562 (10)
C30.0829 (3)0.0282 (3)0.23272 (17)0.0544 (10)
C40.2004 (3)−0.0098 (3)0.20640 (17)0.0553 (10)
C50.3082 (3)−0.0176 (3)0.25619 (17)0.0568 (10)
C60.4390 (3)−0.0579 (4)0.2335 (2)0.0700 (12)
C70.4441 (4)−0.1991 (4)0.2031 (2)0.0798 (16)
C80.3898 (4)−0.2128 (5)0.1245 (2)0.0865 (17)
C90.2484 (4)−0.1809 (4)0.1093 (2)0.0839 (16)
C100.2126 (4)−0.0375 (4)0.12674 (19)0.0721 (14)
C11−0.0402 (3)0.0400 (3)0.18588 (16)0.0551 (10)
C12−0.1082 (3)0.1580 (3)0.18180 (18)0.0595 (11)
C13−0.2265 (3)0.1698 (3)0.14134 (18)0.0601 (11)
C14−0.2783 (3)0.0606 (3)0.10434 (17)0.0586 (11)
C15−0.2119 (4)−0.0577 (4)0.1079 (2)0.0728 (12)
C16−0.0948 (4)−0.0675 (4)0.1480 (2)0.0691 (11)
C17−0.4694 (4)0.1773 (4)0.0621 (2)0.0760 (14)
C180.1993 (3)0.0751 (3)0.43212 (16)0.0505 (9)
C190.3097 (3)0.0476 (4)0.47628 (18)0.0647 (11)
C200.3172 (3)0.0689 (4)0.55055 (19)0.0641 (11)
C210.2123 (3)0.1207 (3)0.58153 (17)0.0562 (10)
C220.1016 (3)0.1529 (4)0.53894 (18)0.0658 (11)
C230.0957 (3)0.1291 (3)0.46491 (18)0.0624 (11)
H20.006200.084000.325100.0670*
H6A0.50170−0.050600.275300.0830*
H6B0.463900.004000.196900.0830*
H7A0.53320−0.228600.207000.0960*
H7B0.39660−0.257600.233000.0960*
H8A0.43830−0.154800.094800.1040*
H8B0.40390−0.303400.108900.1040*
H9A0.19910−0.240600.137700.1000*
H9B0.22330−0.198000.058200.1000*
H10A0.277600.021400.109800.0870*
H10B0.13120−0.016100.099600.0870*
H12−0.073700.231800.206900.0710*
H13−0.270300.250500.139300.0720*
H15−0.24640−0.131700.083000.0870*
H16−0.05130−0.148400.149700.0830*
H17A−0.547900.163700.031800.1140*
H17B−0.421800.249200.042900.1140*
H17C−0.489300.198600.110600.1140*
H190.381200.013600.455500.0780*
H200.392300.048400.579300.0770*
H220.031700.190200.559800.0790*
H230.020400.149800.436300.0750*
U11U22U33U12U13U23
Br10.0721 (2)0.1010 (3)0.0569 (2)0.0059 (2)0.0055 (2)−0.0121 (2)
O10.0727 (15)0.0659 (15)0.0804 (16)0.0092 (12)−0.0131 (12)−0.0115 (12)
N10.0601 (16)0.0502 (14)0.0594 (15)0.0013 (12)0.0077 (12)−0.0005 (12)
C10.0608 (18)0.0430 (16)0.0564 (16)0.0004 (14)0.0080 (14)0.0016 (13)
C20.0578 (17)0.0502 (18)0.0613 (17)0.0005 (14)0.0096 (14)−0.0026 (14)
C30.0634 (18)0.0427 (16)0.0570 (17)−0.0029 (14)0.0039 (14)0.0017 (13)
C40.0655 (19)0.0487 (17)0.0528 (16)−0.0003 (14)0.0115 (14)0.0005 (13)
C50.0653 (18)0.0504 (18)0.0557 (17)0.0000 (15)0.0119 (14)−0.0012 (14)
C60.065 (2)0.081 (2)0.065 (2)0.0042 (19)0.0118 (16)−0.0063 (18)
C70.083 (3)0.082 (3)0.076 (2)0.019 (2)0.017 (2)−0.005 (2)
C80.094 (3)0.085 (3)0.083 (3)0.008 (2)0.022 (2)−0.024 (2)
C90.089 (3)0.090 (3)0.074 (2)−0.008 (2)0.015 (2)−0.023 (2)
C100.073 (2)0.085 (3)0.0592 (19)−0.001 (2)0.0102 (16)−0.0013 (18)
C110.0635 (18)0.0493 (18)0.0532 (16)−0.0004 (15)0.0089 (14)−0.0016 (13)
C120.0670 (19)0.0494 (18)0.0622 (18)−0.0037 (15)0.0066 (15)−0.0081 (14)
C130.0662 (19)0.0509 (19)0.0631 (18)0.0062 (15)0.0049 (15)−0.0036 (14)
C140.0626 (19)0.0565 (19)0.0565 (17)0.0017 (16)0.0031 (14)−0.0044 (14)
C150.081 (2)0.052 (2)0.082 (2)0.0008 (18)−0.0129 (19)−0.0192 (17)
C160.081 (2)0.0498 (19)0.075 (2)0.0078 (17)−0.0021 (18)−0.0101 (16)
C170.075 (2)0.080 (3)0.072 (2)0.013 (2)0.0000 (18)−0.0022 (19)
C180.0569 (17)0.0397 (15)0.0550 (16)−0.0012 (13)0.0060 (13)−0.0014 (13)
C190.0603 (19)0.071 (2)0.0634 (19)0.0084 (17)0.0082 (15)−0.0124 (16)
C200.0579 (18)0.070 (2)0.0637 (19)0.0051 (17)0.0006 (15)−0.0079 (17)
C210.0610 (18)0.0501 (18)0.0580 (17)−0.0058 (14)0.0075 (14)−0.0049 (13)
C220.0625 (19)0.077 (2)0.0589 (18)0.0100 (18)0.0112 (15)−0.0016 (17)
C230.0607 (18)0.069 (2)0.0574 (17)0.0082 (16)0.0049 (14)0.0040 (15)
Br1—C211.890 (3)C20—C211.377 (5)
O1—C141.367 (4)C21—C221.377 (5)
O1—C171.419 (5)C22—C231.381 (5)
N1—C11.355 (4)C2—H20.9300
N1—C51.340 (4)C6—H6A0.9700
C1—C21.378 (4)C6—H6B0.9700
C1—C181.491 (4)C7—H7A0.9700
C2—C31.392 (4)C7—H7B0.9700
C3—C41.406 (4)C8—H8A0.9700
C3—C111.488 (4)C8—H8B0.9700
C4—C51.390 (4)C9—H9A0.9700
C4—C101.510 (5)C9—H9B0.9700
C5—C61.513 (5)C10—H10A0.9700
C6—C71.529 (6)C10—H10B0.9700
C7—C81.516 (5)C12—H120.9300
C8—C91.509 (6)C13—H130.9300
C9—C101.530 (6)C15—H150.9300
C11—C121.380 (4)C16—H160.9300
C11—C161.383 (5)C17—H17A0.9600
C12—C131.390 (5)C17—H17B0.9600
C13—C141.378 (4)C17—H17C0.9600
C14—C151.374 (5)C19—H190.9300
C15—C161.375 (6)C20—H200.9300
C18—C191.379 (5)C22—H220.9300
C18—C231.390 (4)C23—H230.9300
C19—C201.381 (5)
C14—O1—C17117.6 (3)C7—C6—H6B109.00
C1—N1—C5118.3 (2)H6A—C6—H6B108.00
N1—C1—C2121.2 (3)C6—C7—H7A109.00
N1—C1—C18115.2 (3)C6—C7—H7B109.00
C2—C1—C18123.5 (3)C8—C7—H7A109.00
C1—C2—C3120.9 (3)C8—C7—H7B109.00
C2—C3—C4118.0 (3)H7A—C7—H7B108.00
C2—C3—C11118.5 (3)C7—C8—H8A108.00
C4—C3—C11123.6 (3)C7—C8—H8B108.00
C3—C4—C5117.7 (3)C9—C8—H8A108.00
C3—C4—C10122.2 (3)C9—C8—H8B108.00
C5—C4—C10120.1 (3)H8A—C8—H8B107.00
N1—C5—C4123.9 (3)C8—C9—H9A109.00
N1—C5—C6114.3 (3)C8—C9—H9B109.00
C4—C5—C6121.9 (3)C10—C9—H9A109.00
C5—C6—C7114.2 (3)C10—C9—H9B109.00
C6—C7—C8114.4 (3)H9A—C9—H9B108.00
C7—C8—C9115.9 (3)C4—C10—H10A109.00
C8—C9—C10114.4 (4)C4—C10—H10B109.00
C4—C10—C9114.8 (3)C9—C10—H10A109.00
C3—C11—C12120.8 (3)C9—C10—H10B109.00
C3—C11—C16121.9 (3)H10A—C10—H10B108.00
C12—C11—C16117.2 (3)C11—C12—H12119.00
C11—C12—C13122.0 (3)C13—C12—H12119.00
C12—C13—C14119.3 (3)C12—C13—H13120.00
O1—C14—C13124.7 (3)C14—C13—H13120.00
O1—C14—C15115.9 (3)C14—C15—H15120.00
C13—C14—C15119.5 (3)C16—C15—H15120.00
C14—C15—C16120.5 (4)C11—C16—H16119.00
C11—C16—C15121.6 (4)C15—C16—H16119.00
C1—C18—C19120.4 (3)O1—C17—H17A109.00
C1—C18—C23122.2 (3)O1—C17—H17B109.00
C19—C18—C23117.4 (3)O1—C17—H17C109.00
C18—C19—C20121.9 (3)H17A—C17—H17B109.00
C19—C20—C21119.3 (3)H17A—C17—H17C110.00
Br1—C21—C20119.5 (2)H17B—C17—H17C110.00
Br1—C21—C22120.0 (2)C18—C19—H19119.00
C20—C21—C22120.5 (3)C20—C19—H19119.00
C21—C22—C23119.2 (3)C19—C20—H20120.00
C18—C23—C22121.7 (3)C21—C20—H20120.00
C1—C2—H2120.00C21—C22—H22120.00
C3—C2—H2120.00C23—C22—H22120.00
C5—C6—H6A109.00C18—C23—H23119.00
C5—C6—H6B109.00C22—C23—H23119.00
C7—C6—H6A109.00
C17—O1—C14—C13−3.6 (5)C3—C4—C5—N1−0.9 (5)
C17—O1—C14—C15176.1 (3)C4—C5—C6—C7−62.8 (4)
C5—N1—C1—C2−0.3 (5)N1—C5—C6—C7117.9 (3)
C1—N1—C5—C6179.9 (3)C5—C6—C7—C879.4 (4)
C1—N1—C5—C40.5 (5)C6—C7—C8—C9−62.9 (5)
C5—N1—C1—C18179.0 (3)C7—C8—C9—C1061.7 (5)
C2—C1—C18—C19171.9 (3)C8—C9—C10—C4−79.3 (4)
N1—C1—C18—C19−7.4 (4)C3—C11—C16—C15176.5 (3)
N1—C1—C18—C23172.3 (3)C12—C11—C16—C150.0 (5)
N1—C1—C2—C30.5 (5)C3—C11—C12—C13−176.8 (3)
C2—C1—C18—C23−8.4 (5)C16—C11—C12—C13−0.2 (5)
C18—C1—C2—C3−178.7 (3)C11—C12—C13—C140.3 (5)
C1—C2—C3—C4−0.8 (4)C12—C13—C14—C15−0.2 (5)
C1—C2—C3—C11179.8 (3)C12—C13—C14—O1179.4 (3)
C11—C3—C4—C102.3 (5)O1—C14—C15—C16−179.6 (3)
C11—C3—C4—C5−179.7 (3)C13—C14—C15—C160.0 (5)
C4—C3—C11—C12−122.9 (3)C14—C15—C16—C110.1 (6)
C2—C3—C11—C1256.5 (4)C1—C18—C19—C20−178.5 (3)
C2—C3—C11—C16−119.9 (4)C23—C18—C19—C201.8 (5)
C2—C3—C4—C51.0 (4)C1—C18—C23—C22179.4 (3)
C4—C3—C11—C1660.7 (4)C19—C18—C23—C22−0.9 (5)
C2—C3—C4—C10−177.1 (3)C18—C19—C20—C21−0.9 (6)
C10—C4—C5—N1177.3 (3)C19—C20—C21—Br1179.1 (3)
C5—C4—C10—C965.7 (4)C19—C20—C21—C22−1.0 (5)
C10—C4—C5—C6−2.0 (5)Br1—C21—C22—C23−178.2 (3)
C3—C4—C10—C9−116.2 (4)C20—C21—C22—C231.8 (5)
C3—C4—C5—C6179.8 (3)C21—C22—C23—C18−0.9 (5)
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Authors:  E Rajanarendar; S Raju; M Nagi Reddy; S Rama Krishna; L Hari Kiran; A Ram Narasimha Reddy; Y Narasimha Reddy
Journal:  Eur J Med Chem       Date:  2012-02-10       Impact factor: 6.514

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3.  Synthesis and anti-microbial activity of some 1- substituted amino-4,6-dimethyl-2-oxo-pyridine-3-carbonitrile derivatives.

Authors:  Rizk E Khidre; Ameen A Abu-Hashem; Mohamed El-Shazly
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4.  Investigating biological activity spectrum for novel quinoline analogues.

Authors:  Robert Musiol; Josef Jampilek; Katarina Kralova; Des R Richardson; Danuta Kalinowski; Barbara Podeszwa; Jacek Finster; Halina Niedbala; Anna Palka; Jaroslaw Polanski
Journal:  Bioorg Med Chem       Date:  2006-11-14       Impact factor: 3.641

5.  Design, synthesis, and pharmacological evaluation of new neuroactive pyrazolo[3,4-b]pyrrolo[3,4-d]pyridine derivatives with in vivo hypnotic and analgesic profile.

Authors:  Ricardo Menegatti; Gilberto M S Silva; Gisele Zapata-Sudo; Juliana M Raimundo; Roberto T Sudo; Eliezer J Barreiro; Carlos A M Fraga
Journal:  Bioorg Med Chem       Date:  2005-09-27       Impact factor: 3.641

6.  Mechanisms of the inhibition of human erythrocyte pyridoxal kinase by drugs.

Authors:  P Lainé-Cessac; A Cailleux; P Allain
Journal:  Biochem Pharmacol       Date:  1997-10-15       Impact factor: 5.858

7.  Novel synthesis of [1]-benzothiepino[5,4-b]pyridine-3-carbonitriles and their anti-inflammatory properties.

Authors:  Adel S Girgis; Nawal Mishriky; Mohey Ellithey; Hanaa M Hosni; Hanaa Farag
Journal:  Bioorg Med Chem       Date:  2007-01-17       Impact factor: 3.641

8.  Preparation and antioxidant activity of alpha-pyridoin and its derivatives.

Authors:  Masashi Hatanaka; Kyoko Takahashi; Shigeo Nakamura; Tadahiko Mashino
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9.  Synthesis of pyrazolo[3,4-b]pyridines under microwave irradiation in multi-component reactions and their antitumor and antimicrobial activities - Part 1.

Authors:  M A El-borai; H F Rizk; M F Abd-Aal; I Y El-Deeb
Journal:  Eur J Med Chem       Date:  2011-12-01       Impact factor: 6.514

10.  Structure validation in chemical crystallography.

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  2 in total

1.  Crystal structures of 2-benzyl-amino-4-(4-bromo-phen-yl)-6,7,8,9-tetra-hydro-5H-cyclo-hepta-[b]pyridine-3-carbo-nitrile and 2-benzyl-amino-4-(4-chloro-phen-yl)-6,7,8,9-tetra-hydro-5H-cyclo-hepta[b]pyridine-3-carbo-nitrile.

Authors:  R A Nagalakshmi; J Suresh; S Maharani; R Ranjith Kumar; P L Nilantha Lakshman
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-01-01

2.  Crystal structure of 2-benzyl-amino-4-(4-meth-oxy-phen-yl)-6,7,8,9-tetra-hydro-5H-cyclo-hepta-[b]pyridine-3-carbo-nitrile.

Authors:  R A Nagalakshmi; J Suresh; S Maharani; R Ranjith Kumar; P L Nilantha Lakshman
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-11-19
  2 in total

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