Literature DB >> 25695314

Development of a reversibly switchable fluorescent protein for super-resolution optical fluctuation imaging (SOFI).

Xi Zhang1,2, Xuanze Chen3,4, Zhiping Zeng3, Mingshu Zhang2, Yujie Sun4, Peng Xi3, Jianxin Peng1, Pingyong Xu2.   

Abstract

Reversibly switchable fluorescent proteins (RSFPs) can be effectively used for super-resolution optical fluctuation imaging (SOFI) based on the switching and fluctuation of single molecules. Several properties of RSFPs strongly influence the quality of SOFI images. These properties include (i) the averaged fluorescence intensity in the fluctuation state, (ii) the on/off contrast ratio, (iii) the photostability, and (iv) the oligomerization tendency. The first three properties determine the fluctuation range of the imaged pixels and the SOFI signal, which are of essential importance to the spatial resolution, and the last may lead to artificial aggregation of target proteins. The RSFPs that are currently used for SOFI are low in averaged fluorescence intensity in the fluctuation state, photostability, and on/off contrast ratio, thereby limiting the range of application of SOFI in biological super-resolution imaging. In this study, we developed a novel monomeric green RSFP termed Skylan-S, which features very high photostability, contrast ratio, and averaged fluorescence intensity in the fluctuation state. Taking advantage of the excellent optical properties of Skylan-S, a 4-fold improvement in the fluctuation range of the imaged pixels and higher SOFI resolution can be obtained compared with Dronpa. Furthermore, super-resolution imaging of the actin or tubulin structures and clathrin-coated pits (CCPs) in living U2OS cells labeled with Skylan-S was demonstrated using the SOFI technique. Overall, Skylan-S developed with outstanding photochemical properties is promising for long-time SOFI imaging with high spatial-temporal resolution.

Entities:  

Keywords:  SOFI; Skylan-S; live-cell imaging; protein engineering; reversibly switchable fluorescent protein; super-resolution microscopy

Mesh:

Substances:

Year:  2015        PMID: 25695314     DOI: 10.1021/nn5064387

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  26 in total

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2.  ADVANCED IMAGING. Extended-resolution structured illumination imaging of endocytic and cytoskeletal dynamics.

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Journal:  Science       Date:  2015-08-28       Impact factor: 47.728

3.  Endocytic proteins are partitioned at the edge of the clathrin lattice in mammalian cells.

Authors:  Kem A Sochacki; Andrea M Dickey; Marie-Paule Strub; Justin W Taraska
Journal:  Nat Cell Biol       Date:  2017-03-27       Impact factor: 28.824

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Authors:  Peri T Kurshan; Sean A Merrill; Yongming Dong; Chen Ding; Marc Hammarlund; Jihong Bai; Erik M Jorgensen; Kang Shen
Journal:  Neuron       Date:  2018-09-27       Impact factor: 17.173

5.  Model-free uncertainty estimation in stochastical optical fluctuation imaging (SOFI) leads to a doubled temporal resolution.

Authors:  Wim Vandenberg; Sam Duwé; Marcel Leutenegger; Benjamien Moeyaert; Bartosz Krajnik; Theo Lasser; Peter Dedecker
Journal:  Biomed Opt Express       Date:  2016-01-15       Impact factor: 3.732

6.  Highly photostable, reversibly photoswitchable fluorescent protein with high contrast ratio for live-cell superresolution microscopy.

Authors:  Xi Zhang; Mingshu Zhang; Dong Li; Wenting He; Jianxin Peng; Eric Betzig; Pingyong Xu
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-25       Impact factor: 11.205

7.  Out-of-Phase Imaging after Optical Modulation (OPIOM) for Multiplexed Fluorescence Imaging Under Adverse Optical Conditions.

Authors:  Raja Chouket; Ruikang Zhang; Agnès Pellissier-Tanon; Annie Lemarchand; Agathe Espagne; Thomas Le Saux; Ludovic Jullien
Journal:  Methods Mol Biol       Date:  2021

8.  Cusp-artifacts in high order superresolution optical fluctuation imaging.

Authors:  Xiyu Yi; Shimon Weiss
Journal:  Biomed Opt Express       Date:  2020-01-02       Impact factor: 3.732

Review 9.  The Growing and Glowing Toolbox of Fluorescent and Photoactive Proteins.

Authors:  Erik A Rodriguez; Robert E Campbell; John Y Lin; Michael Z Lin; Atsushi Miyawaki; Amy E Palmer; Xiaokun Shu; Jin Zhang; Roger Y Tsien
Journal:  Trends Biochem Sci       Date:  2016-11-01       Impact factor: 13.807

10.  Casein Kinase 1δ Stabilizes Mature Axons by Inhibiting Transcription Termination of Ankyrin.

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Journal:  Dev Cell       Date:  2020-01-06       Impact factor: 12.270

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