Literature DB >> 25692585

Quantitative analysis and modeling probe polarity establishment in C. elegans embryos.

Simon Blanchoud1, Coralie Busso2, Félix Naef3, Pierre Gönczy4.   

Abstract

Cell polarity underlies many aspects of metazoan development and homeostasis, and relies notably on a set of PAR proteins located at the cell cortex. How these proteins interact in space and time remains incompletely understood. We performed a quantitative assessment of polarity establishment in one-cell stage Caenorhabditis elegans embryos by combining time-lapse microscopy and image analysis. We used our extensive data set to challenge and further specify an extant mathematical model. Using likelihood-based calibration, we uncovered that cooperativity is required for both anterior and posterior PAR complexes. Moreover, we analyzed the dependence of polarity establishment on changes in size or temperature. The observed robustness of PAR domain dimensions in embryos of different sizes is in agreement with a model incorporating fixed protein concentrations and variations in embryo surface/volume ratio. In addition, we quantified the dynamics of polarity establishment over most of the viable temperatures range of C. elegans. Modeling of these data suggests that diffusion of PAR proteins is the process most affected by temperature changes, although cortical flows appear unaffected. Overall, our quantitative analytical framework provides insights into the dynamics of polarity establishment in a developing system.
Copyright © 2015 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 25692585      PMCID: PMC4336357          DOI: 10.1016/j.bpj.2014.12.022

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  54 in total

Review 1.  Completely derandomized self-adaptation in evolution strategies.

Authors:  N Hansen; A Ostermeier
Journal:  Evol Comput       Date:  2001       Impact factor: 3.277

2.  Polarization of the C. elegans zygote proceeds via distinct establishment and maintenance phases.

Authors:  Adrian A Cuenca; Aaron Schetter; Donato Aceto; Kenneth Kemphues; Geraldine Seydoux
Journal:  Development       Date:  2003-04       Impact factor: 6.868

Review 3.  Mechanisms of asymmetric cell division: flies and worms pave the way.

Authors:  Pierre Gönczy
Journal:  Nat Rev Mol Cell Biol       Date:  2008-05       Impact factor: 94.444

4.  Full-genome RNAi profiling of early embryogenesis in Caenorhabditis elegans.

Authors:  B Sönnichsen; L B Koski; A Walsh; P Marschall; B Neumann; M Brehm; A-M Alleaume; J Artelt; P Bettencourt; E Cassin; M Hewitson; C Holz; M Khan; S Lazik; C Martin; B Nitzsche; M Ruer; J Stamford; M Winzi; R Heinkel; M Röder; J Finell; H Häntsch; S J M Jones; M Jones; F Piano; K C Gunsalus; K Oegema; P Gönczy; A Coulson; A A Hyman; C J Echeverri
Journal:  Nature       Date:  2005-03-24       Impact factor: 49.962

Review 5.  The role of alterations in membrane lipid composition in enabling physiological adaptation of organisms to their physical environment.

Authors:  J R Hazel; E E Williams
Journal:  Prog Lipid Res       Date:  1990       Impact factor: 16.195

6.  Asymmetrically distributed PAR-3 protein contributes to cell polarity and spindle alignment in early C. elegans embryos.

Authors:  B Etemad-Moghadam; S Guo; K J Kemphues
Journal:  Cell       Date:  1995-12-01       Impact factor: 41.582

7.  C. elegans PAR proteins function by mobilizing and stabilizing asymmetrically localized protein complexes.

Authors:  Rebecca J Cheeks; Julie C Canman; Willow N Gabriel; Nicole Meyer; Susan Strome; Bob Goldstein
Journal:  Curr Biol       Date:  2004-05-25       Impact factor: 10.834

8.  Does thermoregulatory behavior maximize reproductive fitness of natural isolates of Caenorhabditis elegans?

Authors:  Jennifer L Anderson; Lori Albergotti; Barbara Ellebracht; Raymond B Huey; Patrick C Phillips
Journal:  BMC Evol Biol       Date:  2011-06-06       Impact factor: 3.260

9.  Robust single-particle tracking in live-cell time-lapse sequences.

Authors:  Khuloud Jaqaman; Dinah Loerke; Marcel Mettlen; Hirotaka Kuwata; Sergio Grinstein; Sandra L Schmid; Gaudenz Danuser
Journal:  Nat Methods       Date:  2008-07-20       Impact factor: 28.547

10.  Cortical and cytoplasmic flow polarity in early embryonic cells of Caenorhabditis elegans.

Authors:  S N Hird; J G White
Journal:  J Cell Biol       Date:  1993-06       Impact factor: 10.539

View more
  6 in total

1.  Cortical forces and CDC-42 control clustering of PAR proteins for Caenorhabditis elegans embryonic polarization.

Authors:  Shyi-Chyi Wang; Tricia Yu Feng Low; Yukako Nishimura; Laurent Gole; Weimiao Yu; Fumio Motegi
Journal:  Nat Cell Biol       Date:  2017-07-24       Impact factor: 28.824

Review 2.  The PAR proteins: from molecular circuits to dynamic self-stabilizing cell polarity.

Authors:  Charles F Lang; Edwin Munro
Journal:  Development       Date:  2017-10-01       Impact factor: 6.868

3.  Guiding self-organized pattern formation in cell polarity establishment.

Authors:  Peter Gross; K Vijay Kumar; Nathan W Goehring; Justin S Bois; Carsten Hoege; Frank Jülicher; Stephan W Grill
Journal:  Nat Phys       Date:  2018-12-03       Impact factor: 20.034

4.  Uncovering the balance of forces driving microtubule aster migration in C. elegans zygotes.

Authors:  A De Simone; A Spahr; C Busso; P Gönczy
Journal:  Nat Commun       Date:  2018-03-05       Impact factor: 14.919

5.  Stoichiometric interactions explain spindle dynamics and scaling across 100 million years of nematode evolution.

Authors:  Che-Hang Yu; Gunar Fabig; Reza Farhadifar; Hai-Yin Wu; David B Stein; Matthew Rockman; Thomas Müller-Reichert; Michael J Shelley; Daniel J Needleman
Journal:  Elife       Date:  2020-09-23       Impact factor: 8.140

6.  Describing the movement of molecules in reduced-dimension models.

Authors:  Natasha S Savage
Journal:  Commun Biol       Date:  2021-06-07
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.