Literature DB >> 25686300

Biochemical and EPR-spectroscopic investigation into heterologously expressed vinyl chloride reductive dehalogenase (VcrA) from Dehalococcoides mccartyi strain VS.

Anutthaman Parthasarathy1, Troy A Stich2, Svenja T Lohner1, Ann Lesnefsky1, R David Britt2, Alfred M Spormann1.   

Abstract

Reductive dehalogenases play a critical role in the microbial detoxification of aquifers contaminated with chloroethenes and chlorethanes by catalyzing the reductive elimination of a halogen. We report here the first heterologous production of vinyl chloride reductase VcrA from Dehalococcoides mccartyi strain VS. Heterologously expressed VcrA was reconstituted to its active form by addition of hydroxocobalamin/adenosylcobalamin, Fe(3+), and sulfide in the presence of mercaptoethanol. The kinetic properties of reconstituted VcrA catalyzing vinyl chloride reduction with Ti(III)-citrate as reductant and methyl viologen as mediator were similar to those obtained previously for VcrA as isolated from D. mccartyi strain VS. VcrA was also found to catalyze a novel reaction, the environmentally important dihaloelimination of 1,2-dichloroethane to ethene. Electron paramagnetic resonance (EPR) spectroscopic studies with reconstituted VcrA in the presence of mercaptoethanol revealed the presence of Cob(II)alamin. Addition of Ti(III)-citrate resulted in the appearance of a new signal characteristic of a reduced [4Fe-4S] cluster and the disappearance of the Cob(II)alamin signal. UV-vis absorption spectroscopy of Ti(III)citrate-treated samples revealed the formation of two new absorption maxima characteristic of Cob(I)alamin. No evidence for the presence of a [3Fe-4S] cluster was found. We postulate that during the reaction cycle of VcrA, a reduced [4Fe-4S] cluster reduces Co(II) to Co(I) of the enzyme-bound cobalamin. Vinyl chloride reduction to ethene would be initiated when Cob(I)alamin transfers an electron to the substrate, generating a vinyl radical as a potential reaction intermediate.

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Year:  2015        PMID: 25686300      PMCID: PMC4516053          DOI: 10.1021/ja511653d

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  36 in total

1.  A signal-to-noise standard for pulsed EPR.

Authors:  Gareth R Eaton; Sandra S Eaton; Richard W Quine; Deborah Mitchell; Velavan Kathirvelu; Ralph T Weber
Journal:  J Magn Reson       Date:  2010-04-24       Impact factor: 2.229

2.  EasySpin, a comprehensive software package for spectral simulation and analysis in EPR.

Authors:  Stefan Stoll; Arthur Schweiger
Journal:  J Magn Reson       Date:  2005-09-26       Impact factor: 2.229

3.  Evidence for a chemiosmotic model of dehalorespiration in Desulfomonile tiedjei DCB-1.

Authors:  T M Louie; W W Mohn
Journal:  J Bacteriol       Date:  1999-01       Impact factor: 3.490

4.  Rapid colorimetric micromethod for the quantitation of complexed iron in biological samples.

Authors:  W W Fish
Journal:  Methods Enzymol       Date:  1988       Impact factor: 1.600

5.  Protein production by auto-induction in high density shaking cultures.

Authors:  F William Studier
Journal:  Protein Expr Purif       Date:  2005-05       Impact factor: 1.650

6.  Characterization of a Dehalobacter coculture that dechlorinates 1,2-dichloroethane to ethene and identification of the putative reductive dehalogenase gene.

Authors:  Ariel Grostern; Elizabeth A Edwards
Journal:  Appl Environ Microbiol       Date:  2009-03-06       Impact factor: 4.792

7.  On the mechanism of catalysis by vitamin B12.

Authors:  J D Brodie
Journal:  Proc Natl Acad Sci U S A       Date:  1969-02       Impact factor: 11.205

8.  Evidence for a radical mechanism of the dechlorination of chlorinated propenes mediated by the tetrachloroethene reductive dehalogenase of Sulfurospirillum muftivorans.

Authors:  Roland P H Schmitz; Julia Wolf; Andreas Habel; Anke Neumann; Kerstin Ploss; Ales Svatos; Wilhelm Boland; Gabriele Diekert
Journal:  Environ Sci Technol       Date:  2007-11-01       Impact factor: 9.028

9.  The proton/electron ration of the menaquinone-dependent electron transport from dihydrogen to tetrachloroethene in "Dehalobacter restrictus".

Authors:  W Schumacher; C Holliger
Journal:  J Bacteriol       Date:  1996-04       Impact factor: 3.490

10.  Visualizing molecular juggling within a B12-dependent methyltransferase complex.

Authors:  Yan Kung; Nozomi Ando; Tzanko I Doukov; Leah C Blasiak; Güneş Bender; Javier Seravalli; Stephen W Ragsdale; Catherine L Drennan
Journal:  Nature       Date:  2012-03-14       Impact factor: 49.962

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  15 in total

1.  Identity and Substrate Specificity of Reductive Dehalogenases Expressed in Dehalococcoides-Containing Enrichment Cultures Maintained on Different Chlorinated Ethenes.

Authors:  Xiaoming Liang; Olivia Molenda; Shuiquan Tang; Elizabeth A Edwards
Journal:  Appl Environ Microbiol       Date:  2015-05-01       Impact factor: 4.792

Review 2.  Microbial degradation of chloroethenes: a review.

Authors:  Iva Dolinová; Martina Štrojsová; Miroslav Černík; Jan Němeček; Jiřina Macháčková; Alena Ševců
Journal:  Environ Sci Pollut Res Int       Date:  2017-04-05       Impact factor: 4.223

3.  Heterologous Expression of Active Dehalobacter Respiratory Reductive Dehalogenases in Escherichia coli.

Authors:  Katherine J Picott; Robert Flick; Elizabeth A Edwards
Journal:  Appl Environ Microbiol       Date:  2021-12-01       Impact factor: 5.005

4.  The MarR-Type Regulator Rdh2R Regulates rdh Gene Transcription in Dehalococcoides mccartyi Strain CBDB1.

Authors:  Lydia Krasper; Hauke Lilie; Anja Kublik; Lorenz Adrian; Ralph Golbik; Ute Lechner
Journal:  J Bacteriol       Date:  2016-11-04       Impact factor: 3.490

5.  Selective Utilization of Benzimidazolyl-Norcobamides as Cofactors by the Tetrachloroethene Reductive Dehalogenase of Sulfurospirillum multivorans.

Authors:  Sebastian Keller; Cindy Kunze; Martin Bommer; Christian Paetz; Riya C Menezes; Aleš Svatoš; Holger Dobbek; Torsten Schubert
Journal:  J Bacteriol       Date:  2018-03-26       Impact factor: 3.490

6.  Dehalogenimonas sp. Strain WBC-2 Genome and Identification of Its trans-Dichloroethene Reductive Dehalogenase, TdrA.

Authors:  Olivia Molenda; Andrew T Quaile; Elizabeth A Edwards
Journal:  Appl Environ Microbiol       Date:  2015-10-09       Impact factor: 4.792

7.  An Aminoimidazole Radical Intermediate in the Anaerobic Biosynthesis of the 5,6-Dimethylbenzimidazole Ligand to Vitamin B12.

Authors:  Derek M Gagnon; Troy A Stich; Angad P Mehta; Sameh H Abdelwahed; Tadhg P Begley; R David Britt
Journal:  J Am Chem Soc       Date:  2018-09-27       Impact factor: 15.419

8.  The corrinoid cofactor of reductive dehalogenases affects dechlorination rates and extents in organohalide-respiring Dehalococcoides mccartyi.

Authors:  Jun Yan; Burcu Şimşir; Abigail T Farmer; Meng Bi; Yi Yang; Shawn R Campagna; Frank E Löffler
Journal:  ISME J       Date:  2015-11-10       Impact factor: 10.302

9.  Interspecies metabolite transfer and aggregate formation in a co-culture of Dehalococcoides and Sulfurospirillum dehalogenating tetrachloroethene to ethene.

Authors:  Stefan Kruse; Dominique Türkowsky; Jan Birkigt; Bruna Matturro; Steffi Franke; Nico Jehmlich; Martin von Bergen; Martin Westermann; Simona Rossetti; Ivonne Nijenhuis; Lorenz Adrian; Gabriele Diekert; Tobias Goris
Journal:  ISME J       Date:  2021-01-21       Impact factor: 10.302

Review 10.  Organohalide Respiring Bacteria and Reductive Dehalogenases: Key Tools in Organohalide Bioremediation.

Authors:  Bat-Erdene Jugder; Haluk Ertan; Susanne Bohl; Matthew Lee; Christopher P Marquis; Michael Manefield
Journal:  Front Microbiol       Date:  2016-03-01       Impact factor: 5.640

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