Literature DB >> 19270140

Characterization of a Dehalobacter coculture that dechlorinates 1,2-dichloroethane to ethene and identification of the putative reductive dehalogenase gene.

Ariel Grostern1, Elizabeth A Edwards.   

Abstract

Dehalobacter and "Dehalococcoides" spp. were previously shown to be involved in the biotransformation of 1,1,2-trichloroethane (1,1,2-TCA) and 1,2-dichloroethane (1,2-DCA) to ethene in a mixed anaerobic enrichment culture. Here we report the further enrichment and characterization of a Dehalobacter sp. from this mixed culture in coculture with an Acetobacterium sp. Through a series of serial transfers and dilutions with acetate, H(2), and 1,2-DCA, a stable coculture of Acetobacterium and Dehalobacter spp. was obtained, where Dehalobacter grew during dechlorination. The isolated Acetobacterium strain did not dechlorinate 1,2-DCA. Quantitative PCR with specific primers showed that Dehalobacter cells did not grow in the absence of a chlorinated electron acceptor and that the growth yield with 1,2-DCA was 6.9 (+/-0.7) x 10(7) 16S rRNA gene copies/mumol 1,2-DCA degraded. PCR with degenerate primers targeting reductive dehalogenase genes detected three distinct Dehalobacter/Desulfitobacterium-type sequences in the mixed-parent culture, but only one of these was present in the 1,2-DCA-H(2) coculture. Reverse transcriptase PCR revealed the transcription of this dehalogenase gene specifically during the dechlorination of 1,2-DCA. The 1,2-DCA-H(2) coculture could dechlorinate 1,2-DCA but not 1,1,2-TCA, nor could it dechlorinate chlorinated ethenes. As a collective, the genus Dehalobacter has been show to dechlorinate many diverse compounds, but individual species seem to each have a narrow substrate range.

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Year:  2009        PMID: 19270140      PMCID: PMC2681677          DOI: 10.1128/AEM.02037-08

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  43 in total

1.  Microbial composition of chlorinated ethene-degrading cultures dominated by Dehalococcoides.

Authors:  Melanie Duhamel; Elizabeth A Edwards
Journal:  FEMS Microbiol Ecol       Date:  2006-12       Impact factor: 4.194

2.  Growth of Dehalobacter and Dehalococcoides spp. during degradation of chlorinated ethanes.

Authors:  Ariel Grostern; Elizabeth A Edwards
Journal:  Appl Environ Microbiol       Date:  2006-01       Impact factor: 4.792

3.  Diversity of corrinoids in acetogenic bacteria. P-cresolylcobamide from Sporomusa ovata, 5-methoxy-6-methylbenzimidazolylcobamide from Clostridium formicoaceticum and vitamin B12 from Acetobacterium woodii.

Authors:  E Stupperich; H J Eisinger; B Kräutler
Journal:  Eur J Biochem       Date:  1988-03-01

4.  A 1,1,1-trichloroethane-degrading anaerobic mixed microbial culture enhances biotransformation of mixtures of chlorinated ethenes and ethanes.

Authors:  Ariel Grostern; Elizabeth A Edwards
Journal:  Appl Environ Microbiol       Date:  2006-10-20       Impact factor: 4.792

5.  Reductive dechlorination of chlorinated ethenes and 1, 2-dichloroethane by "Dehalococcoides ethenogenes" 195.

Authors:  X Maymó-Gatell; T Anguish; S H Zinder
Journal:  Appl Environ Microbiol       Date:  1999-07       Impact factor: 4.792

6.  Discrimination of multiple Dehalococcoides strains in a trichloroethene enrichment by quantification of their reductive dehalogenase genes.

Authors:  Victor F Holmes; Jianzhong He; Patrick K H Lee; Lisa Alvarez-Cohen
Journal:  Appl Environ Microbiol       Date:  2006-09       Impact factor: 4.792

7.  Genetic identification of a putative vinyl chloride reductase in Dehalococcoides sp. strain BAV1.

Authors:  Rosa Krajmalnik-Brown; Tina Hölscher; Ivy N Thomson; F Michael Saunders; Kirsti M Ritalahti; Frank E Löffler
Journal:  Appl Environ Microbiol       Date:  2004-10       Impact factor: 4.792

8.  16S rrn gene copy number in Helicobacter pylori and its application to molecular typing.

Authors:  D Linton; M Moreno; R J Owen; J Stanley
Journal:  J Appl Bacteriol       Date:  1992-12

9.  The proton/electron ration of the menaquinone-dependent electron transport from dihydrogen to tetrachloroethene in "Dehalobacter restrictus".

Authors:  W Schumacher; C Holliger
Journal:  J Bacteriol       Date:  1996-04       Impact factor: 3.490

10.  Anaerobic degradation of toluene and o-xylene by a methanogenic consortium.

Authors:  E A Edwards; D Grbić-Galić
Journal:  Appl Environ Microbiol       Date:  1994-01       Impact factor: 4.792

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  21 in total

1.  Dichloromethane fermentation by a Dehalobacter sp. in an enrichment culture derived from pristine river sediment.

Authors:  Shandra D Justicia-Leon; Kirsti M Ritalahti; E Erin Mack; Frank E Löffler
Journal:  Appl Environ Microbiol       Date:  2011-12-16       Impact factor: 4.792

2.  Refined experimental annotation reveals conserved corrinoid autotrophy in chloroform-respiring Dehalobacter isolates.

Authors:  Po-Hsiang Wang; Shuiquan Tang; Kayla Nemr; Robert Flick; Jun Yan; Radhakrishnan Mahadevan; Alexander F Yakunin; Frank E Löffler; Elizabeth A Edwards
Journal:  ISME J       Date:  2016-11-29       Impact factor: 10.302

3.  Biochemical and EPR-spectroscopic investigation into heterologously expressed vinyl chloride reductive dehalogenase (VcrA) from Dehalococcoides mccartyi strain VS.

Authors:  Anutthaman Parthasarathy; Troy A Stich; Svenja T Lohner; Ann Lesnefsky; R David Britt; Alfred M Spormann
Journal:  J Am Chem Soc       Date:  2015-03-04       Impact factor: 15.419

4.  Direct loop mediated isothermal amplification on filters for quantification of Dehalobacter in groundwater.

Authors:  Robert D Stedtfeld; Tiffany M Stedtfeld; Farag Samhan; Yogendra H Kanitkar; Paul B Hatzinger; Alison M Cupples; Syed A Hashsham
Journal:  J Microbiol Methods       Date:  2016-10-05       Impact factor: 2.363

5.  Bacterial diversity and reductive dehalogenase redundancy in a 1,2-dichloroethane-degrading bacterial consortium enriched from a contaminated aquifer.

Authors:  Massimo Marzorati; Annalisa Balloi; Francesca de Ferra; Lorenzo Corallo; Giovanna Carpani; Lieven Wittebolle; Willy Verstraete; Daniele Daffonchio
Journal:  Microb Cell Fact       Date:  2010-02-19       Impact factor: 5.328

6.  Identification of Dehalobacter reductive dehalogenases that catalyse dechlorination of chloroform, 1,1,1-trichloroethane and 1,1-dichloroethane.

Authors:  Shuiquan Tang; Elizabeth A Edwards
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-03-11       Impact factor: 6.237

7.  The restricted metabolism of the obligate organohalide respiring bacterium Dehalobacter restrictus: lessons from tiered functional genomics.

Authors:  Aamani Rupakula; Thomas Kruse; Sjef Boeren; Christof Holliger; Hauke Smidt; Julien Maillard
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-03-11       Impact factor: 6.237

8.  A New Catabolic Plasmid in Xanthobacter and Starkeya spp. from a 1,2-Dichloroethane-Contaminated Site.

Authors:  Jacob E Munro; Elissa F Liew; Mai-Anh Ly; Nicholas V Coleman
Journal:  Appl Environ Microbiol       Date:  2016-08-15       Impact factor: 4.792

9.  Isolation of Acetobacterium sp. strain AG, which reductively debrominates octa- and pentabrominated diphenyl ether technical mixtures.

Authors:  Chang Ding; Wai Ling Chow; Jianzhong He
Journal:  Appl Environ Microbiol       Date:  2012-11-30       Impact factor: 4.792

10.  Kinetics of 1,2-dichloroethane and 1,2-dibromoethane biodegradation in anaerobic enrichment cultures.

Authors:  Rong Yu; Hari S Peethambaram; Ronald W Falta; Matthew F Verce; James K Henderson; Christopher E Bagwell; Robin L Brigmon; David L Freedman
Journal:  Appl Environ Microbiol       Date:  2012-12-21       Impact factor: 4.792

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