Literature DB >> 25683441

Initiation and regulation of paramyxovirus transcription and replication.

Sarah L Noton1, Rachel Fearns2.   

Abstract

The paramyxovirus family has a genome consisting of a single strand of negative sense RNA. This genome acts as a template for two distinct processes: transcription to generate subgenomic, capped and polyadenylated mRNAs, and genome replication. These viruses only encode one polymerase. Thus, an intriguing question is, how does the viral polymerase initiate and become committed to either transcription or replication? By answering this we can begin to understand how these two processes are regulated. In this review article, we present recent findings from studies on the paramyxovirus, respiratory syncytial virus, which show how its polymerase is able to initiate transcription and replication from a single promoter. We discuss how these findings apply to other paramyxoviruses. Then, we examine how trans-acting proteins and promoter secondary structure might serve to regulate transcription and replication during different phases of the paramyxovirus replication cycle.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Gene expression; Mononegavirales; Non-segmented negative strand RNA virus; Paramyxoviridae; Paramyxovirus; Polymerase; Promoter; Replication; Transcription

Mesh:

Substances:

Year:  2015        PMID: 25683441      PMCID: PMC4424093          DOI: 10.1016/j.virol.2015.01.014

Source DB:  PubMed          Journal:  Virology        ISSN: 0042-6822            Impact factor:   3.616


  96 in total

1.  Competition between the Sendai virus N mRNA start site and the genome 3'-end promoter for viral RNA polymerase.

Authors:  Philippe Le Mercier; Dominique Garcin; Eduardo Garcia; Daniel Kolakofsky
Journal:  J Virol       Date:  2003-09       Impact factor: 5.103

2.  Positive- and negative-acting signals combine to determine differential RNA replication from the paramyxovirus simian virus 5 genomic and antigenomic promoters.

Authors:  Michael A Keller; Griffith D Parks
Journal:  Virology       Date:  2003-02-15       Impact factor: 3.616

Review 3.  Viral DNA polymerase scanning and the gymnastics of Sendai virus RNA synthesis.

Authors:  Daniel Kolakofsky; Philippe Le Mercier; Frédéric Iseni; Dominique Garcin
Journal:  Virology       Date:  2004-01-20       Impact factor: 3.616

4.  The Sendai virus V protein interacts with the NP protein to regulate viral genome RNA replication.

Authors:  S M Horikami; S Smallwood; S A Moyer
Journal:  Virology       Date:  1996-08-15       Impact factor: 3.616

5.  The Sendai virus C protein binds the L polymerase protein to inhibit viral RNA synthesis.

Authors:  S M Horikami; R E Hector; S Smallwood; S A Moyer
Journal:  Virology       Date:  1997-09-01       Impact factor: 3.616

6.  Transcription elongation factor of respiratory syncytial virus, a nonsegmented negative-strand RNA virus.

Authors:  P L Collins; M G Hill; J Cristina; H Grosfeld
Journal:  Proc Natl Acad Sci U S A       Date:  1996-01-09       Impact factor: 11.205

7.  RNA replication by a respiratory syncytial virus RNA analog does not obey the rule of six and retains a nonviral trinucleotide extension at the leader end.

Authors:  S K Samal; P L Collins
Journal:  J Virol       Date:  1996-08       Impact factor: 5.103

8.  The Sendai paramyxovirus accessory C proteins inhibit viral genome amplification in a promoter-specific fashion.

Authors:  T Cadd; D Garcin; C Tapparel; M Itoh; M Homma; L Roux; J Curran; D Kolakofsky
Journal:  J Virol       Date:  1996-08       Impact factor: 5.103

9.  An internal element of the measles virus antigenome promoter modulates replication efficiency.

Authors:  Pramila Walpita
Journal:  Virus Res       Date:  2004-03-15       Impact factor: 3.303

10.  Two RNA polymerase complexes from vesicular stomatitis virus-infected cells that carry out transcription and replication of genome RNA.

Authors:  Kaustubha R Qanungo; Daniel Shaji; Manjula Mathur; Amiya K Banerjee
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-06       Impact factor: 11.205

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  52 in total

1.  Structure of a paramyxovirus polymerase complex reveals a unique methyltransferase-CTD conformation.

Authors:  Ryan Abdella; Megha Aggarwal; Takashi Okura; Robert A Lamb; Yuan He
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-19       Impact factor: 11.205

Review 2.  Polymerases of paramyxoviruses and pneumoviruses.

Authors:  Rachel Fearns; Richard K Plemper
Journal:  Virus Res       Date:  2017-01-16       Impact factor: 3.303

Review 3.  How order and disorder within paramyxoviral nucleoproteins and phosphoproteins orchestrate the molecular interplay of transcription and replication.

Authors:  Sonia Longhi; Louis-Marie Bloyet; Stefano Gianni; Denis Gerlier
Journal:  Cell Mol Life Sci       Date:  2017-06-09       Impact factor: 9.261

Review 4.  Conditionally disordered proteins: bringing the environment back into the fold.

Authors:  Andrew C Hausrath; Richard L Kingston
Journal:  Cell Mol Life Sci       Date:  2017-06-08       Impact factor: 9.261

5.  Ebola Virus Replication Stands Out.

Authors:  Wenjie Wang; Chao Wu; Gaya K Amarasinghe; Daisy W Leung
Journal:  Trends Microbiol       Date:  2019-05-30       Impact factor: 17.079

6.  Respiratory Syncytial Virus Inhibitor AZ-27 Differentially Inhibits Different Polymerase Activities at the Promoter.

Authors:  Sarah L Noton; Kartikeya Nagendra; Ewan F Dunn; Michael E Mawhorter; Qin Yu; Rachel Fearns
Journal:  J Virol       Date:  2015-05-20       Impact factor: 5.103

7.  RNA secondary structure at the transcription start site influences EBOV transcription initiation and replication in a length- and stability-dependent manner.

Authors:  Simone Bach; Jana-Christin Demper; Nadine Biedenkopf; Stephan Becker; Roland K Hartmann
Journal:  RNA Biol       Date:  2020-10-22       Impact factor: 4.652

Review 8.  To assemble or not to assemble: The changing rules of pneumovirus transmission.

Authors:  Nicolás Cifuentes-Muñoz; Rebecca Ellis Dutch
Journal:  Virus Res       Date:  2019-03-05       Impact factor: 3.303

9.  Crystal Structure of the Measles Virus Nucleoprotein Core in Complex with an N-Terminal Region of Phosphoprotein.

Authors:  Sergey G Guryanov; Lassi Liljeroos; Prasad Kasaragod; Tommi Kajander; Sarah J Butcher
Journal:  J Virol       Date:  2015-12-30       Impact factor: 5.103

10.  Functional correlations of respiratory syncytial virus proteins to intrinsic disorder.

Authors:  Jillian N Whelan; Krishna D Reddy; Vladimir N Uversky; Michael N Teng
Journal:  Mol Biosyst       Date:  2016-04-26
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