Literature DB >> 25681989

The distinct genetic pattern of ALS in Turkey and novel mutations.

Aslıhan Özoğuz1, Özgün Uyan1, Güneş Birdal1, Ceren Iskender1, Ece Kartal1, Suna Lahut1, Özgür Ömür1, Zeynep Sena Agim1, Aslı Gündoğdu Eken1, Nesli Ece Sen1, Pınar Kavak2, Ceren Saygı1, Peter C Sapp3, Pamela Keagle3, Yeşim Parman4, Ersin Tan5, Filiz Koç6, Feza Deymeer4, Piraye Oflazer4, Haşmet Hanağası4, Hakan Gürvit4, Başar Bilgiç4, Hacer Durmuş4, Mustafa Ertaş7, Dilcan Kotan8, Mehmet Ali Akalın9, Halil Güllüoğlu10, Mehmet Zarifoğlu11, Fikret Aysal12, Nilgün Döşoğlu13, Kaya Bilguvar14, Murat Günel14, Özlem Keskin15, Tahsin Akgün16, Hilmi Özçelik17, John E Landers3, Robert H Brown3, A Nazlı Başak18.   

Abstract

The frequency of amyotrophic lateral sclerosis (ALS) mutations has been extensively investigated in several populations; however, a systematic analysis in Turkish cases has not been reported so far. In this study, we screened 477 ALS patients for mutations, including 116 familial ALS patients from 82 families and 361 sporadic ALS (sALS) cases. Patients were genotyped for C9orf72 (18.3%), SOD1 (12.2%), FUS (5%), TARDBP (3.7%), and UBQLN2 (2.4%) gene mutations, which together account for approximately 40% of familial ALS in Turkey. No SOD1 mutations were detected in sALS patients; however, C9orf72 (3.1%) and UBQLN2 (0.6%) explained 3.7% of sALS in the population. Exome sequencing revealed mutations in OPTN, SPG11, DJ1, PLEKHG5, SYNE1, TRPM7, and SQSTM1 genes, many of them novel. The spectrum of mutations reflect both the distinct genetic background and the heterogeneous nature of the Turkish ALS population.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  ALS; C9orf72; FUS; SOD1; TDP-43; Turkey

Mesh:

Substances:

Year:  2015        PMID: 25681989      PMCID: PMC6591733          DOI: 10.1016/j.neurobiolaging.2014.12.032

Source DB:  PubMed          Journal:  Neurobiol Aging        ISSN: 0197-4580            Impact factor:   4.673


  39 in total

Review 1.  El Escorial revisited: revised criteria for the diagnosis of amyotrophic lateral sclerosis.

Authors:  B R Brooks; R G Miller; M Swash; T L Munsat
Journal:  Amyotroph Lateral Scler Other Motor Neuron Disord       Date:  2000-12

2.  DJ-1 mutations and parkinsonism-dementia-amyotrophic lateral sclerosis complex.

Authors:  Grazia Annesi; Giovanni Savettieri; Pierfrancesco Pugliese; Marco D'Amelio; Patrizia Tarantino; Paolo Ragonese; Vincenzo La Bella; Tommaso Piccoli; Donatella Civitelli; Ferdinanda Annesi; Brigida Fierro; Federico Piccoli; Gennarina Arabia; Manuela Caracciolo; Innocenza Claudia Cirò Candiano; Aldo Quattrone
Journal:  Ann Neurol       Date:  2005-11       Impact factor: 10.422

3.  SOD1 mutations in amyotrophic lateral sclerosis. Results from a multicenter Italian study.

Authors:  Stefania Battistini; Fabio Giannini; Giuseppe Greco; Giuseppe Bibbò; Loreta Ferrera; Valeria Marini; Renzo Causarano; Michela Casula; Giuliana Lando; Maria Cristina Patrosso; Claudia Caponnetto; Paola Origone; Alessandro Marocchi; Alberto Del Corona; Gabriele Siciliano; Paola Carrera; Vincenzo Mascia; Marcello Giagheddu; Carlo Carcassi; Sandro Orrù; Cecilia Garrè; Silvana Penco
Journal:  J Neurol       Date:  2005-03-29       Impact factor: 4.849

4.  A TRPM7 variant shows altered sensitivity to magnesium that may contribute to the pathogenesis of two Guamanian neurodegenerative disorders.

Authors:  Meredith C Hermosura; Hannah Nayakanti; Maxim V Dorovkov; Fernanda R Calderon; Alexey G Ryazanov; David S Haymer; Ralph M Garruto
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-28       Impact factor: 11.205

Review 5.  Molecular biology of amyotrophic lateral sclerosis: insights from genetics.

Authors:  Piera Pasinelli; Robert H Brown
Journal:  Nat Rev Neurosci       Date:  2006-09       Impact factor: 34.870

6.  Mutational analysis of the Cu/Zn superoxide dismutase gene in a Catalan ALS population: should all sporadic ALS cases also be screened for SOD1?

Authors:  Josep Gamez; Marc Corbera-Bellalta; Gisela Nogales; Nuria Raguer; Elena García-Arumí; Mercè Badia-Canto; E Lladó-Carbó; José Alvarez-Sabín
Journal:  J Neurol Sci       Date:  2006-05-03       Impact factor: 3.181

7.  A gene encoding a putative GTPase regulator is mutated in familial amyotrophic lateral sclerosis 2.

Authors:  S Hadano; C K Hand; H Osuga; Y Yanagisawa; A Otomo; R S Devon; N Miyamoto; J Showguchi-Miyata; Y Okada; R Singaraja; D A Figlewicz; T Kwiatkowski; B A Hosler; T Sagie; J Skaug; J Nasir; R H Brown; S W Scherer; G A Rouleau; M R Hayden; J E Ikeda
Journal:  Nat Genet       Date:  2001-10       Impact factor: 38.330

8.  TDP-43 A315T mutation in familial motor neuron disease.

Authors:  Michael A Gitcho; Robert H Baloh; Sumi Chakraverty; Kevin Mayo; Joanne B Norton; Denise Levitch; Kimmo J Hatanpaa; Charles L White; Eileen H Bigio; Richard Caselli; Matt Baker; Muhammad T Al-Lozi; John C Morris; Alan Pestronk; Rosa Rademakers; Alison M Goate; Nigel J Cairns
Journal:  Ann Neurol       Date:  2008-02-20       Impact factor: 10.422

9.  The nuclear factor kappaB-activator gene PLEKHG5 is mutated in a form of autosomal recessive lower motor neuron disease with childhood onset.

Authors:  Isabelle Maystadt; René Rezsöhazy; Martine Barkats; Sandra Duque; Pascal Vannuffel; Sophie Remacle; Barbara Lambert; Mustapha Najimi; Etienne Sokal; Arnold Munnich; Louis Viollet; Christine Verellen-Dumoulin
Journal:  Am J Hum Genet       Date:  2007-05-16       Impact factor: 11.025

10.  Genes mirror geography within Europe.

Authors:  John Novembre; Toby Johnson; Katarzyna Bryc; Zoltán Kutalik; Adam R Boyko; Adam Auton; Amit Indap; Karen S King; Sven Bergmann; Matthew R Nelson; Matthew Stephens; Carlos D Bustamante
Journal:  Nature       Date:  2008-08-31       Impact factor: 49.962

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  27 in total

1.  Comparison of the clinical and cognitive features of genetically positive ALS patients from the largest tertiary center in Serbia.

Authors:  Ivan V Marjanović; Biljana Selak-Djokić; Stojan Perić; Milena Janković; Vladimir Arsenijević; Ivana Basta; Dragana Lavrnić; Elka Stefanova; Zorica Stević
Journal:  J Neurol       Date:  2017-04-25       Impact factor: 4.849

2.  Human SOD1 ALS Mutations in a Drosophila Knock-In Model Cause Severe Phenotypes and Reveal Dosage-Sensitive Gain- and Loss-of-Function Components.

Authors:  Aslı Şahin; Aaron Held; Kirsten Bredvik; Paxton Major; Toni-Marie Achilli; Abigail G Kerson; Kristi Wharton; Geoff Stilwell; Robert Reenan
Journal:  Genetics       Date:  2016-12-14       Impact factor: 4.562

3.  Multiple Isoforms of Nesprin1 Are Integral Components of Ciliary Rootlets.

Authors:  Chloe Potter; Wanqiu Zhu; David Razafsky; Philip Ruzycki; Alexander V Kolesnikov; Teresa Doggett; Vladimir J Kefalov; Ewelina Betleja; Moe R Mahjoub; Didier Hodzic
Journal:  Curr Biol       Date:  2017-06-15       Impact factor: 10.834

4.  The KASH-containing isoform of Nesprin1 giant associates with ciliary rootlets of ependymal cells.

Authors:  C Potter; D Razafsky; D Wozniak; M Casey; S Penrose; X Ge; M R Mahjoub; D Hodzic
Journal:  Neurobiol Dis       Date:  2018-04-06       Impact factor: 5.996

5.  Frontotemporal dementia spectrum: first genetic screen in a Greek cohort.

Authors:  Eliana Marisa Ramos; Christos Koros; Deepika Reddy Dokuru; Victoria Van Berlo; Christos Kroupis; Kevin Wojta; Qing Wang; Nikolaos Andronas; Stavroula Matsi; Ion N Beratis; Alden Y Huang; Suzee E Lee; Anastasios Bonakis; Chryseis Florou-Hatziyiannidou; Stella Fragkiadaki; Dionysia Kontaxopoulou; Dimitrios Agiomyrgiannakis; Vasiliki Kamtsadeli; Niki Tsinia; Vasiliki Papastefanopoulou; Maria Stamelou; Bruce L Miller; Leonidas Stefanis; John D Papatriantafyllou; Sokratis G Papageorgiou; Giovanni Coppola
Journal:  Neurobiol Aging       Date:  2018-11-03       Impact factor: 4.673

6.  Adaptation to Turkish and Reliability Study of the Revised Amyotrophic Lateral Sclerosis Functional Rating Scale (ALSFRS-R).

Authors:  Filiz Koç; Mehmet Balal; Turgay Demir; Z Nazan Alparslan; Yakup Sarica
Journal:  Noro Psikiyatr Ars       Date:  2016-09-01       Impact factor: 1.339

7.  OPTN 691_692insAG is a founder mutation causing recessive ALS and increased risk in heterozygotes.

Authors:  Orly Goldstein; Omri Nayshool; Beatrice Nefussy; Bryan J Traynor; Alan E Renton; Mali Gana-Weisz; Vivian E Drory; Avi Orr-Urtreger
Journal:  Neurology       Date:  2016-01-06       Impact factor: 9.910

Review 8.  Structure, dynamics and functions of UBQLNs: at the crossroads of protein quality control machinery.

Authors:  Tongyin Zheng; Yiran Yang; Carlos A Castañeda
Journal:  Biochem J       Date:  2020-09-30       Impact factor: 3.857

9.  ERLIN1 mutations cause teenage-onset slowly progressive ALS in a large Turkish pedigree.

Authors:  Ceren Tunca; Fulya Akçimen; Cemre Coşkun; Aslı Gündoğdu-Eken; Cemile Kocoglu; Betül Çevik; Can Ebru Bekircan-Kurt; Ersin Tan; A Nazlı Başak
Journal:  Eur J Hum Genet       Date:  2018-02-16       Impact factor: 4.246

Review 10.  TRPM7 and its role in neurodegenerative diseases.

Authors:  Yuyang Sun; Pramod Sukumaran; Anne Schaar; Brij B Singh
Journal:  Channels (Austin)       Date:  2015-07-28       Impact factor: 2.581

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