Literature DB >> 25645610

Probing the sources of the apparent irreproducibility of amyloid formation: drastic changes in kinetics and a switch in mechanism due to micellelike oligomer formation at critical concentrations of IAPP.

Jeffrey R Brender1, Janarthanan Krishnamoorthy, Michele F M Sciacca, Subramanian Vivekanandan, Luisa D'Urso, Jennifer Chen, Carmelo La Rosa, Ayyalusamy Ramamoorthy.   

Abstract

The aggregation of amyloidogenic proteins is infamous for being highly chaotic, with small variations in conditions sometimes leading to large changes in aggregation rates. Using the amyloidogenic protein IAPP (islet amyloid polypeptide protein, also known as amylin) as an example, we show that a part of this phenomenon may be related to the formation of micellelike oligomers at specific critical concentrations and temperatures. We show that pyrene fluorescence can sensitively detect micellelike oligomer formation by IAPP and discriminate between micellelike oligomers from fibers and monomers, making pyrene one of the few chemical probes specific to a prefibrillar oligomer. We further show that oligomers of this type reversibly form at critical concentrations in the low micromolar range and at specific critical temperatures. Micellelike oligomer formation has several consequences for amyloid formation by IAPP. First, the kinetics of fiber formation increase substantially as the critical concentration is approached but are nearly independent of concentration below it, suggesting a direct role for the oligomers in fiber formation. Second, the critical concentration is strongly correlated with the propensity to form amyloid: higher critical concentrations are observed for both IAPP variants with lower amyloidogenicity and for native IAPP at acidic pH in which aggregation is greatly slowed. Furthermore, using the DEST NMR technique, we show that the pathway of amyloid formation switches as the critical point is approached, with self-interactions primarily near the N-terminus below the critical temperature and near the central region above the critical temperature, reconciling two apparently conflicting views of the initiation of IAPP aggregation.

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Year:  2015        PMID: 25645610     DOI: 10.1021/jp511758w

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  28 in total

1.  What Can the Kinetics of Amyloid Fibril Formation Tell about Off-pathway Aggregation?

Authors:  Rosa Crespo; Eva Villar-Alvarez; Pablo Taboada; Fernando A Rocha; Ana M Damas; Pedro M Martins
Journal:  J Biol Chem       Date:  2015-11-24       Impact factor: 5.157

2.  Growth-incompetent monomers of human calcitonin lead to a noncanonical direct relationship between peptide concentration and aggregation lag time.

Authors:  Kian Kamgar-Parsi; Liu Hong; Akira Naito; Charles L Brooks; Ayyalusamy Ramamoorthy
Journal:  J Biol Chem       Date:  2017-07-24       Impact factor: 5.157

Review 3.  Dynamic membrane interactions of antibacterial and antifungal biomolecules, and amyloid peptides, revealed by solid-state NMR spectroscopy.

Authors:  Akira Naito; Nobuaki Matsumori; Ayyalusamy Ramamoorthy
Journal:  Biochim Biophys Acta Gen Subj       Date:  2017-06-06       Impact factor: 3.770

4.  Identification of a hinge residue controlling islet amyloid polypeptide self-assembly and cytotoxicity.

Authors:  Elizabeth Godin; Phuong Trang Nguyen; Ximena Zottig; Steve Bourgault
Journal:  J Biol Chem       Date:  2019-04-11       Impact factor: 5.157

5.  Mechanism of Fibril and Soluble Oligomer Formation in Amyloid Beta and Hen Egg White Lysozyme Proteins.

Authors:  Carlos Perez; Tatiana Miti; Filip Hasecke; Georg Meisl; Wolfgang Hoyer; Martin Muschol; Ghanim Ullah
Journal:  J Phys Chem B       Date:  2019-06-27       Impact factor: 2.991

6.  Small molecule induced toxic human-IAPP species characterized by NMR.

Authors:  Sarah J Cox; Diana C Rodriguez Camargo; Young-Ho Lee; Romeo C A Dubini; Petra Rovó; Magdalena I Ivanova; Vediappen Padmini; Bernd Reif; Ayyalusamy Ramamoorthy
Journal:  Chem Commun (Camb)       Date:  2020-10-02       Impact factor: 6.222

7.  Functional proteasome complex is required for turnover of islet amyloid polypeptide in pancreatic β-cells.

Authors:  Diti Chatterjee Bhowmick; Aleksandar Jeremic
Journal:  J Biol Chem       Date:  2018-07-16       Impact factor: 5.157

8.  Real-time monitoring of the aggregation of Alzheimer's amyloid-β via1H magic angle spinning NMR spectroscopy.

Authors:  Jian Wang; Tomoya Yamamoto; Jia Bai; Sarah J Cox; Kyle J Korshavn; Martine Monette; Ayyalusamy Ramamoorthy
Journal:  Chem Commun (Camb)       Date:  2018-02-20       Impact factor: 6.222

9.  Amylin-Aβ oligomers at atomic resolution using molecular dynamics simulations: a link between Type 2 diabetes and Alzheimer's disease.

Authors:  Michal Baram; Yoav Atsmon-Raz; Buyong Ma; Ruth Nussinov; Yifat Miller
Journal:  Phys Chem Chem Phys       Date:  2016-01-28       Impact factor: 3.676

10.  NMR unveils an N-terminal interaction interface on acetylated-α-synuclein monomers for recruitment to fibrils.

Authors:  Xue Yang; Baifan Wang; Cody L Hoop; Jonathan K Williams; Jean Baum
Journal:  Proc Natl Acad Sci U S A       Date:  2021-05-04       Impact factor: 11.205

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