Literature DB >> 25620398

A nuclear magnetic resonance method for probing molecular influences of substrate loading in nonribosomal peptide synthetase carrier proteins.

Andrew C Goodrich1, Dominique P Frueh.   

Abstract

Carrier proteins (CPs) play a central role in nonribosomal peptide synthetases (NRPSs) as they shuttle covalently attached substrates between active sites. Understanding how the covalent attachment of a substrate (loading) influences the molecular properties of CPs is key to determining the mechanism of NRPS synthesis. However, structural studies have been impaired by substrate hydrolysis. Here, we used nuclear magnetic resonance spectroscopy to monitor substrate loading of a CP and to overcome hydrolysis. Our results reveal the spectroscopic signature of substrate loading and provide evidence of molecular communication between an NRPS carrier protein and its covalently attached substrate.

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Year:  2015        PMID: 25620398      PMCID: PMC4378656          DOI: 10.1021/bi501433r

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  21 in total

1.  Crystal structure of the termination module of a nonribosomal peptide synthetase.

Authors:  Alan Tanovic; Stefan A Samel; Lars-Oliver Essen; Mohamed A Marahiel
Journal:  Science       Date:  2008-06-26       Impact factor: 47.728

2.  Rational design of peptide antibiotics by targeted replacement of bacterial and fungal domains.

Authors:  T Stachelhaus; A Schneider; M A Marahiel
Journal:  Science       Date:  1995-07-07       Impact factor: 47.728

3.  Acyl carrier protein from Escherichia coli. Structural characterization of short-chain acylated acyl carrier proteins by NMR.

Authors:  K H Mayo; J H Prestegard
Journal:  Biochemistry       Date:  1985-12-17       Impact factor: 3.162

4.  Tandem heterocyclization activity of the multidomain 230 kDa HMWP2 subunit of Yersinia pestis yersiniabactin synthetase: interaction of the 1-1382 and 1383-2035 fragments.

Authors:  Z Suo; C T Walsh; D A Miller
Journal:  Biochemistry       Date:  1999-10-19       Impact factor: 3.162

5.  Conformational switches modulate protein interactions in peptide antibiotic synthetases.

Authors:  Alexander Koglin; Mohammad R Mofid; Frank Löhr; Birgit Schäfer; Vladimir V Rogov; Marc-Michael Blum; Tanja Mittag; Mohamed A Marahiel; Frank Bernhard; Volker Dötsch
Journal:  Science       Date:  2006-04-14       Impact factor: 47.728

6.  The nonribosomal peptide synthetase HMWP2 forms a thiazoline ring during biogenesis of yersiniabactin, an iron-chelating virulence factor of Yersinia pestis.

Authors:  A M Gehring; I Mori; R D Perry; C T Walsh
Journal:  Biochemistry       Date:  1998-08-18       Impact factor: 3.162

Review 7.  Conformational dynamics in the Acyl-CoA synthetases, adenylation domains of non-ribosomal peptide synthetases, and firefly luciferase.

Authors:  Andrew M Gulick
Journal:  ACS Chem Biol       Date:  2009-10-16       Impact factor: 5.100

8.  Dynamic thiolation-thioesterase structure of a non-ribosomal peptide synthetase.

Authors:  Dominique P Frueh; Haribabu Arthanari; Alexander Koglin; David A Vosburg; Andrew E Bennett; Christopher T Walsh; Gerhard Wagner
Journal:  Nature       Date:  2008-08-14       Impact factor: 49.962

9.  TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts.

Authors:  Yang Shen; Frank Delaglio; Gabriel Cornilescu; Ad Bax
Journal:  J Biomol NMR       Date:  2009-06-23       Impact factor: 2.835

10.  Structural rearrangements of a polyketide synthase module during its catalytic cycle.

Authors:  Jonathan R Whicher; Somnath Dutta; Douglas A Hansen; Wendi A Hale; Joseph A Chemler; Annie M Dosey; Alison R H Narayan; Kristina Håkansson; David H Sherman; Janet L Smith; Georgios Skiniotis
Journal:  Nature       Date:  2014-06-18       Impact factor: 49.962

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  8 in total

1.  Molecular impact of covalent modifications on nonribosomal peptide synthetase carrier protein communication.

Authors:  Andrew C Goodrich; David J Meyers; Dominique P Frueh
Journal:  J Biol Chem       Date:  2017-04-28       Impact factor: 5.157

2.  Manipulating Protein-Protein Interactions in Nonribosomal Peptide Synthetase Type II Peptidyl Carrier Proteins.

Authors:  Matt J Jaremko; D John Lee; Ashay Patel; Victoria Winslow; Stanley J Opella; J Andrew McCammon; Michael D Burkart
Journal:  Biochemistry       Date:  2017-10-02       Impact factor: 3.162

3.  Shifting the Hydrolysis Equilibrium of Substrate Loaded Acyl Carrier Proteins.

Authors:  Terra Sztain; Thomas G Bartholow; J Andrew McCammon; Michael D Burkart
Journal:  Biochemistry       Date:  2019-08-14       Impact factor: 3.162

4.  NMR as a readout to monitor and restore the integrity of complex chemoenzymatic reactions.

Authors:  Kenneth A Marincin; Yousang Hwang; Everett S Kengmana; David J Meyers; Dominique P Frueh
Journal:  J Magn Reson       Date:  2022-07-08       Impact factor: 2.734

5.  Solution Structure of a Nonribosomal Peptide Synthetase Carrier Protein Loaded with Its Substrate Reveals Transient, Well-Defined Contacts.

Authors:  Andrew C Goodrich; Bradley J Harden; Dominique P Frueh
Journal:  J Am Chem Soc       Date:  2015-09-15       Impact factor: 15.419

6.  Structure and Substrate Sequestration in the Pyoluteorin Type II Peptidyl Carrier Protein PltL.

Authors:  Matt J Jaremko; D John Lee; Stanley J Opella; Michael D Burkart
Journal:  J Am Chem Soc       Date:  2015-09-04       Impact factor: 15.419

Review 7.  New Structural Data Reveal the Motion of Carrier Proteins in Nonribosomal Peptide Synthesis.

Authors:  Tiia Kittilä; Aurelio Mollo; Louise K Charkoudian; Max J Cryle
Journal:  Angew Chem Int Ed Engl       Date:  2016-07-20       Impact factor: 15.336

8.  Global protein dynamics as communication sensors in peptide synthetase domains.

Authors:  Subrata H Mishra; Aswani K Kancherla; Kenneth A Marincin; Guillaume Bouvignies; Santrupti Nerli; Nikolaos Sgourakis; Daniel P Dowling; Dominique P Frueh
Journal:  Sci Adv       Date:  2022-07-15       Impact factor: 14.957

  8 in total

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