Literature DB >> 25618332

Identification of therapeutic small-molecule leads in cultured cells using multiplexed pathway reporter readouts.

Ozlem Kulak1, Kiyoshi Yamaguchi, Lawrence Lum.   

Abstract

The rapid expansion of molecular screening libraries in size and complexity in the last decade has outpaced the discovery rate of cost-effective strategies to single out reagents with sought-after cellular activities. In addition to representing high-priority therapeutic targets, intensely studied cell signaling systems encapsulate robust reference points for mapping novel chemical activities given our deep understanding of the molecular mechanisms that support their activity. In this chapter, we describe strategies for using transcriptional reporters of several well-interrogated signal transduction pathways coupled with high-throughput biochemical assays to fingerprint novel compounds for drug target identification agendas.

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Year:  2015        PMID: 25618332      PMCID: PMC4313378          DOI: 10.1007/978-1-4939-2269-7_1

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  11 in total

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2.  A multiplexed luciferase-based screening platform for interrogating cancer-associated signal transduction in cultured cells.

Authors:  Ozlem Kulak; Lawrence Lum
Journal:  J Vis Exp       Date:  2013-07-03       Impact factor: 1.355

3.  Doubts raised over 'read-through' Duchenne drug mechanism.

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Review 4.  Statistical methods for analysis of high-throughput RNA interference screens.

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Journal:  Nat Methods       Date:  2009-08       Impact factor: 28.547

5.  Genome-wide RNAi screen reveals disease-associated genes that are common to Hedgehog and Wnt signaling.

Authors:  Leni S Jacob; Xiaofeng Wu; Michael E Dodge; Chih-Wei Fan; Ozlem Kulak; Baozhi Chen; Wei Tang; Baolin Wang; James F Amatruda; Lawrence Lum
Journal:  Sci Signal       Date:  2011-01-25       Impact factor: 8.192

6.  A genome-wide RNAi screen for Wnt/beta-catenin pathway components identifies unexpected roles for TCF transcription factors in cancer.

Authors:  Wei Tang; Michael Dodge; Deepika Gundapaneni; Carolyn Michnoff; Michael Roth; Lawrence Lum
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-10       Impact factor: 11.205

Review 7.  Innovation in academic chemical screening: filling the gaps in chemical biology.

Authors:  Samuel A Hasson; James Inglese
Journal:  Curr Opin Chem Biol       Date:  2013-05-14       Impact factor: 8.822

8.  Zebrafish prickle, a modulator of noncanonical Wnt/Fz signaling, regulates gastrulation movements.

Authors:  Michael T Veeman; Diane C Slusarski; Ajamete Kaykas; Sarah Hallagan Louie; Randall T Moon
Journal:  Curr Biol       Date:  2003-04-15       Impact factor: 10.834

Review 9.  HTS and hit finding in academia--from chemical genomics to drug discovery.

Authors:  Julie A Frearson; Iain T Collie
Journal:  Drug Discov Today       Date:  2009-09-28       Impact factor: 7.851

10.  Small molecule-mediated disruption of Wnt-dependent signaling in tissue regeneration and cancer.

Authors:  Baozhi Chen; Michael E Dodge; Wei Tang; Jianming Lu; Zhiqiang Ma; Chih-Wei Fan; Shuguang Wei; Wayne Hao; Jessica Kilgore; Noelle S Williams; Michael G Roth; James F Amatruda; Chuo Chen; Lawrence Lum
Journal:  Nat Chem Biol       Date:  2009-01-04       Impact factor: 15.040

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  1 in total

Review 1.  Zebrafish small molecule screens: Taking the phenotypic plunge.

Authors:  Charles H Williams; Charles C Hong
Journal:  Comput Struct Biotechnol J       Date:  2016-09-18       Impact factor: 7.271

  1 in total

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