Literature DB >> 2561110

Repair of base-base mismatches in simian and human cells.

T C Brown1, J Jiricny.   

Abstract

Mismatched heteroduplexes arise as intermediates of several dissimilar genetic processes. The outcome of these genetic events will therefore be influenced by the efficiency and specificity of mismatch repair. We have studied the correction of base-base mispairs in simian and human fibroblasts by transfecting the cells with derivatives of SV40 DNA, each harboring a single mispair in a defined orientation. Analysis of plaques revealed that correction efficiencies for homomispairs followed the pattern G.G greater than C.C greater than or equal to A.A greater than T.T. Repair bias was influenced by flanking sequences. Correction efficiences for heteromispairs followed the pattern of G.T greater than A.C greater than C.T greater than A.G and repair favored the retention of G + C by a substantial margin. This repair specificity could lead to a gene conversion bias favoring the accumulation of G + C in sequences subject to high levels of recombination or unequal exchange.

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Year:  1989        PMID: 2561110     DOI: 10.1139/g89-107

Source DB:  PubMed          Journal:  Genome        ISSN: 0831-2796            Impact factor:   2.166


  18 in total

1.  Weak selection and recent mutational changes influence polymorphic synonymous mutations in humans.

Authors:  Josep M Comeron
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-21       Impact factor: 11.205

2.  Detecting positive selection within genomes: the problem of biased gene conversion.

Authors:  Abhirami Ratnakumar; Sylvain Mousset; Sylvain Glémin; Jonas Berglund; Nicolas Galtier; Laurent Duret; Matthew T Webster
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-08-27       Impact factor: 6.237

3.  Variation in efficiency of DNA mismatch repair at different sites in the yeast genome.

Authors:  Joshua D Hawk; Lela Stefanovic; Jayne C Boyer; Thomas D Petes; Rosann A Farber
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-02       Impact factor: 11.205

4.  Mismatch repair by efficient nick-directed, and less efficient mismatch-specific, mechanisms in homologous recombination intermediates in Chinese hamster ovary cells.

Authors:  E M Miller; H L Hough; J W Cho; J A Nickoloff
Journal:  Genetics       Date:  1997-10       Impact factor: 4.562

5.  Biased gene conversion skews allele frequencies in human populations, increasing the disease burden of recessive alleles.

Authors:  Joseph Lachance; Sarah A Tishkoff
Journal:  Am J Hum Genet       Date:  2014-10-02       Impact factor: 11.025

6.  Ascertaining regions affected by GC-biased gene conversion through weak-to-strong mutational hotspots.

Authors:  Valer Gotea; Laura Elnitski
Journal:  Genomics       Date:  2014-04-13       Impact factor: 5.736

7.  GC content and recombination: reassessing the causal effects for the Saccharomyces cerevisiae genome.

Authors:  Marie-Claude Marsolier-Kergoat; Edouard Yeramian
Journal:  Genetics       Date:  2009-06-22       Impact factor: 4.562

8.  Consensus sequences for good and poor removal of uracil from double stranded DNA by uracil-DNA glycosylase.

Authors:  I Eftedal; P H Guddal; G Slupphaug; G Volden; H E Krokan
Journal:  Nucleic Acids Res       Date:  1993-05-11       Impact factor: 16.971

9.  Mismatch repair deficiency predicts response to HER2 blockade in HER2-negative breast cancer.

Authors:  Nindo B Punturi; Sinem Seker; Vaishnavi Devarakonda; Aloran Mazumder; Rashi Kalra; Ching Hui Chen; Shunqiang Li; Tina Primeau; Matthew J Ellis; Shyam M Kavuri; Svasti Haricharan
Journal:  Nat Commun       Date:  2021-05-19       Impact factor: 14.919

10.  GC-biased gene conversion in yeast is specifically associated with crossovers: molecular mechanisms and evolutionary significance.

Authors:  Yann Lesecque; Dominique Mouchiroud; Laurent Duret
Journal:  Mol Biol Evol       Date:  2013-03-16       Impact factor: 16.240

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