| Literature DB >> 25606419 |
Brehima Diakite1, Khalil Hamzi1, Ilham Slassi2, Mohammed El Yahyaoui3, Moulay M F El Alaoui3, Rachida Habbal4, Nadifi Sellama1.
Abstract
Nitric oxide plays a major role in the regulation of cerebral blood flow and loss of its function leads to alteration of the vascular relaxation given its central role in the physiology of the vascular system. G894T eNOS polymorphism could have adverse effects on the expression and activity of endothelial nitric oxide synthase, which can result in functional impairment of the endothelium and contribute to the development of ischemic stroke in the different models of transmission. In this study, genotyping with PCR-RFLP and HRM (high resolution melting) methods were conducted on 165 ischemic stroke patients as well as 182 controls. The goal here was to compare genotyping with PCR-RLFP primer sequences of eNOS gene (size < 300 bp) to HRM. Our data suggests a statistically significant association between G894T eNOS polymorphism and ischemic stroke in recessive, dominant and additive models with P < 0.05 and odds ratio of 2.68 (1.08-6.70), 1.78 (1.16-2.73), and 1.71 (1.21-2.43) respectively. In sum, although the sample size is relatively small, it suggests that G894T eNOS polymorphism could be a potentially important genetic marker of ischemic stroke in the Moroccan population. Future studies should be conducted in this direction taking into consideration the functional activity of eNOS.Entities:
Keywords: 894T eNOS, mutant allele of endothelial nitric oxide synthase; AB, applied biosystems; CI, confidence interval; DNA, deoxyribonucleic acid or deoxyribose nucleic acid; Fig., figure; G894T eNOS; G894T eNOS, replacement guanine by thymine at position 894 of the endothelial nitric oxide synthase; GG eNOS, homozygous wild of endothelial nitric oxide synthase; GT eNOS, heterozygous mutant of endothelial nitric oxide synthase; Genetics models; HRM, high resolution melt; IS, ischemic stroke; Ischemic stroke; LGPM, genetic and molecular pathology laboratory; NO, nitric oxide; OR, odds ratio; P, P value; PCR-RFLP, polymerase chain reaction-restriction fragment length polymorphism; Ref., reference; TOAST, Trial of Org 10172 in Acute Stroke Treatment; TT eNOS, homozygous mutant of endothelial nitric oxide synthase; bp, base pair; eNOS, endothelial nitric oxide synthase; vs, versus; χ2, chi square
Year: 2014 PMID: 25606419 PMCID: PMC4287825 DOI: 10.1016/j.mgene.2014.04.003
Source DB: PubMed Journal: Meta Gene ISSN: 2214-5400
Fig. 1PCR-RFLP analysis on agarose gel of G894T eNOS polymorphism. Lanes 1, 2, and 4 represent GG homozygous wild-type; lanes 5, 6, and 7 represent GT heterozygous and lane 3, TT homozygous mutated.
Fig. 2Aligned melting curve HRM analysis of G894T eNOS polymorphism. Blue—GG homozygous wild type, red—GT heterozygous mutant and green—TT homozygous mutant.
Fig. 3Difference plots of HRM analysis of G894T eNOS polymorphism. Blue—GG homozygous wild type, red—GT heterozygous mutant and green reference—TT homozygous mutant.
Frequencies of G894T eNOS polymorphism according to age, gender and subtypes in ischemic stroke subjects.
| IS characteristic | N | P value | |||
|---|---|---|---|---|---|
| Age | 165 | 0.11 | |||
| ≤ 50 years | 47 | 21 (44.7) | 24 (51.1) | 2 (4.3) | |
| > 50 years | 118 | 62 (52.5) | 42 (35.6) | 14 (11.9) | |
| Gender | 165 | 0.51 | |||
| Female | 74 | 38 (51.4) | 31 (41.9) | 5 (6.8) | |
| Male | 91 | 45 (49.5) | 35 (38.5) | 11 (12.1) | |
N: total number, GG eNOS wild genotypes, GT eNOS variant heterozygous, TT eNOS variant homozygous.
Genotype frequencies of G894T eNOS gene according to ischemic stroke subtype.
| Genotypes | TOAST classification (%) | |||
|---|---|---|---|---|
| Atherosclerosis | Cardioembolic | Lacunar | Others | |
| GG | 45 (48.4) | 29 (54.7) | 4 (50.0) | 5 (45.5) |
| 38 (40.9) | 21 (39.6) | 3 (37.5) | 4 (36.4) | |
| 10 (10.8) | 3 (5.7) | 1 (12.5) | 2 (18.2) | |
Chi-square test of all IS subtypes (χ2 = 2.27, P = 0.89).
GG eNOS wild genotypes, GT eNOS variant heterozygous, TT eNOS variant homozygous, TOAST (Trial of Org 10172 in Acute Stroke Treatment).
Genotype and allele frequencies of G894T eNOS polymorphism in patients with ischemic stroke and controls.
| Genotypes/alleles | Cases (%) | Control (%) | OR (95% CI) | P value |
|---|---|---|---|---|
| 83 (50.3) | 117 (64.3) | 1 | ||
| 66 (40.0) | 58 (31.9) | 1.60 (1.02–2.52) | 0.040 | |
| 16 (8.0) | 7 (3.8) | 3.22 (1.27–8.18) | 0.014 | |
| 149 (90.3) | 175 (96.2) | 1 | ||
| 16 (9.7) | 7 (3.8) | 2.68 (1.08–6.70) | 0.034 | |
| 83 (50.3) | 117 (64.3) | 1 | ||
| 82 (46.7) | 65 (35.7) | 1.78 (1.16–2.73) | 0.009 | |
| 232 (70.3) | 292 (80.2) | 1 | ||
| 98 (29.7) | 72 (19.8) | 1.71 (1.21–2.43) | 0.003 |
N: Number, OR: odds ratio, CI: confidence interval, P < 0.05, vs.: versus, Ref.: reference, %: percentage.
Significant.
TT vs. GG + GT (recessive model) for G894T eNOS.
GT + TT vs. GG (dominant model) for G894T eNOS.
T vs. G (additive model) for G894T eNOS.
Summary of studies of G894T eNOS polymorphism and ischemic stroke in genetic models.
| Additive model | Dominant model | Recessive model | Authors | |||
|---|---|---|---|---|---|---|
| OR (95% CI) | P < 0.05 | OR (95% CI) | P < 0.05 | OR (95% CI) | P < 0.05 | |
| 1.16 (1.05–1.13) | 0.003 | 2.26 (1.2–4.66) | 0.014 | 2.58 (0.05–13.62) | 0.26 | |
| 1.06 (0.99–1.13) | 0.06 | 1.07 (0.99–1.55) | 0.11 | 1.11 (0.97–1.28) | 0.12 | Tao et al. (2009) |
| 1.97 (1.59–2.43) | < 0.0001 | 2.51 (1.86–3.39) | < 0.0001 | 2.24 (1.40–3.42) | < 0.0001 | |
| 1.27 (1.13–1.42) | 0.000 | 1.30 (1.15–1.49) | 0.000 | 1.273 (0.85–1.91) | 0.25 | |
| 1.34 (1.11–1.60) | 0.000 | 1.34 (1.10–1.62) | 0.000 | 1.27 (0.85–1.91) | 0.074 | |
| 1.71 (1.21–2.43) | 0.003 | 1.78 (1.16–2.73) | 0.009 | 2.68 (1.08–6.70) | 0.034 | Our study 2014 |
OR: odds ratio, CI: confidence interval, P < 0.05.
Significant.