Literature DB >> 17559349

High-resolution DNA melting analysis for simple and efficient molecular diagnostics.

Gudrun H Reed1, Jana O Kent, Carl T Wittwer.   

Abstract

High-resolution melting of DNA is a simple solution for genotyping, mutation scanning and sequence matching. The melting profile of a PCR product depends on its GC content, length, sequence and heterozygosity and is best monitored with saturating dyes that fluoresce in the presence of double-stranded DNA. Genotyping of most variants is possible by the melting temperature of the PCR products, while all variants can be genotyped with unlabeled probes. Mutation scanning and sequence matching depend on sequence differences that result in heteroduplexes that change the shape of the melting curve. High-resolution DNA melting has several advantages over other genotyping and scanning methods, including an inexpensive closed tube format that is homogenous, accurate and rapid. Owing to its simplicity and speed, the method is a good fit for personalized medicine as a rapid, inexpensive method to predict therapeutic response.

Mesh:

Year:  2007        PMID: 17559349     DOI: 10.2217/14622416.8.6.597

Source DB:  PubMed          Journal:  Pharmacogenomics        ISSN: 1462-2416            Impact factor:   2.533


  164 in total

1.  Detection of genetic variation in KCNQ1 gene by high-resolution melting analysis in a prospective-based series of postmortem negative sudden death: comparison of results obtained in fresh frozen and formalin-fixed paraffin-embedded tissues.

Authors:  Audrey Farrugia; Christine Keyser; Bertrand Ludes
Journal:  Int J Legal Med       Date:  2012-03-09       Impact factor: 2.686

2.  High-resolution melting analysis, a simple and effective method for reliable mutation scanning and frequency studies in the ACADVL gene.

Authors:  Rikke Katrine Jentoft Olsen; Steven F Dobrowolski; Margrethe Kjeldsen; David Hougaard; Henrik Simonsen; Niels Gregersen; Brage Storstein Andresen
Journal:  J Inherit Metab Dis       Date:  2010-05-18       Impact factor: 4.982

3.  High-resolution melting analysis for identification of the Cryptococcus neoformans-Cryptococcus gattii complex.

Authors:  Sara Gago; Óscar Zaragoza; Isabel Cuesta; Juan L Rodríguez-Tudela; Manuel Cuenca-Estrella; María J Buitrago
Journal:  J Clin Microbiol       Date:  2011-08-10       Impact factor: 5.948

4.  Rapid detection and identification of Theileria equi and Babesia caballi by high-resolution melting (HRM) analysis.

Authors:  Bashir Salim; Mohammed Ahmed Bakheit; Chihiro Sugimoto
Journal:  Parasitol Res       Date:  2013-08-29       Impact factor: 2.289

5.  The management of paroxysmal nocturnal hemoglobinuria: recent advances in diagnosis and treatment and new hope for patients.

Authors:  Neal S Young; Gabrielle Meyers; Hubert Schrezenmeier; Peter Hillmen; Anita Hill
Journal:  Semin Hematol       Date:  2009-01       Impact factor: 3.851

6.  Accurate zygote-specific discrimination of single-nucleotide polymorphisms using microfluidic electrochemical DNA melting curves.

Authors:  Allen H J Yang; Kuangwen Hsieh; Adriana S Patterson; B Scott Ferguson; Michael Eisenstein; Kevin W Plaxco; H Tom Soh
Journal:  Angew Chem Int Ed Engl       Date:  2014-02-12       Impact factor: 15.336

7.  High-resolution melting-based TILLING of γ ray-induced mutations in rice.

Authors:  Shan Li; Song-Mei Liu; Hao-Wei Fu; Jian-Zhong Huang; Qing-Yao Shu
Journal:  J Zhejiang Univ Sci B       Date:  2018 Aug.       Impact factor: 3.066

8.  Application of high-resolution melting analysis for differentiation of spoilage yeasts.

Authors:  Mine Erdem; Zülal Kesmen; Esra Özbekar; Bülent Çetin; Hasan Yetim
Journal:  J Microbiol       Date:  2016-08-31       Impact factor: 3.422

9.  FDM 3D Printing of High-Pressure, Heat-Resistant, Transparent Microfluidic Devices.

Authors:  Valentin Romanov; Raheel Samuel; Marzieh Chaharlang; Alexander R Jafek; Adam Frost; Bruce K Gale
Journal:  Anal Chem       Date:  2018-08-17       Impact factor: 6.986

10.  High resolution melting analysis for gene scanning.

Authors:  Maria Erali; Carl T Wittwer
Journal:  Methods       Date:  2010-01-18       Impact factor: 3.608

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