Literature DB >> 25605898

Microbial denitrification dominates nitrate losses from forest ecosystems.

Yunting Fang1, Keisuke Koba2, Akiko Makabe3, Chieko Takahashi3, Weixing Zhu4, Takahiro Hayashi3, Azusa A Hokari3, Rieko Urakawa5, Edith Bai6, Benjamin Z Houlton7, Dan Xi6, Shasha Zhang6, Kayo Matsushita3, Ying Tu6, Dongwei Liu6, Feifei Zhu6, Zhenyu Wang6, Guoyi Zhou8, Dexiang Chen9, Tomoko Makita3, Hiroto Toda3, Xueyan Liu3, Quansheng Chen10, Deqiang Zhang8, Yide Li9, Muneoki Yoh3.   

Abstract

Denitrification removes fixed nitrogen (N) from the biosphere, thereby restricting the availability of this key limiting nutrient for terrestrial plant productivity. This microbially driven process has been exceedingly difficult to measure, however, given the large background of nitrogen gas (N2) in the atmosphere and vexing scaling issues associated with heterogeneous soil systems. Here, we use natural abundance of N and oxygen isotopes in nitrate (NO3 (-)) to examine dentrification rates across six forest sites in southern China and central Japan, which span temperate to tropical climates, as well as various stand ages and N deposition regimes. Our multiple stable isotope approach across soil to watershed scales shows that traditional techniques underestimate terrestrial denitrification fluxes by up to 98%, with annual losses of 5.6-30.1 kg of N per hectare via this gaseous pathway. These N export fluxes are up to sixfold higher than NO3 (-) leaching, pointing to widespread dominance of denitrification in removing NO3 (-) from forest ecosystems across a range of conditions. Further, we report that the loss of NO3 (-) to denitrification decreased in comparison to leaching pathways in sites with the highest rates of anthropogenic N deposition.

Entities:  

Keywords:  denitrification; forested watersheds; nitrate isotopes; nitrogen cycling

Mesh:

Substances:

Year:  2015        PMID: 25605898      PMCID: PMC4321283          DOI: 10.1073/pnas.1416776112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  17 in total

1.  A bacterial method for the nitrogen isotopic analysis of nitrate in seawater and freshwater.

Authors:  D M Sigman; K L Casciotti; M Andreani; C Barford; M Galanter; J K Böhlke
Journal:  Anal Chem       Date:  2001-09-01       Impact factor: 6.986

2.  Using ¹⁷O to investigate nitrate sources and sinks in a semi-arid groundwater system.

Authors:  Navid René Dejwakh; Thomas Meixner; Greg Michalski; Jennifer McIntosh
Journal:  Environ Sci Technol       Date:  2012-01-05       Impact factor: 9.028

3.  Triple oxygen isotope analysis of nitrate using the denitrifier method and thermal decomposition of N2O.

Authors:  Jan Kaiser; Meredith G Hastings; Benjamin Z Houlton; Thomas Röckmann; Daniel M Sigman
Journal:  Anal Chem       Date:  2007-01-15       Impact factor: 6.986

Review 4.  Methods for measuring denitrification: diverse approaches to a difficult problem.

Authors:  Peter M Groffman; Mark A Altabet; J K Böhlke; Klaus Butterbach-Bahl; Mark B David; Mary K Firestone; Anne E Giblin; Todd M Kana; Lars Peter Nielsen; Mary A Voytek
Journal:  Ecol Appl       Date:  2006-12       Impact factor: 4.657

5.  Isotopic evidence for large gaseous nitrogen losses from tropical rainforests.

Authors:  Benjamin Z Houlton; Daniel M Sigman; Lars O Hedin
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-25       Impact factor: 11.205

6.  Stream denitrification across biomes and its response to anthropogenic nitrate loading.

Authors:  Patrick J Mulholland; Ashley M Helton; Geoffrey C Poole; Robert O Hall; Stephen K Hamilton; Bruce J Peterson; Jennifer L Tank; Linda R Ashkenas; Lee W Cooper; Clifford N Dahm; Walter K Dodds; Stuart E G Findlay; Stanley V Gregory; Nancy B Grimm; Sherri L Johnson; William H McDowell; Judy L Meyer; H Maurice Valett; Jackson R Webster; Clay P Arango; Jake J Beaulieu; Melody J Bernot; Amy J Burgin; Chelsea L Crenshaw; Laura T Johnson; B R Niederlehner; Jonathan M O'Brien; Jody D Potter; Richard W Sheibley; Daniel J Sobota; Suzanne M Thomas
Journal:  Nature       Date:  2008-03-13       Impact factor: 49.962

7.  Measurement of N2, N2O, NO, and CO2 emissions from soil with the gas-flow-soil-core technique.

Authors:  Rui Wang; Georg Willibald; Qi Feng; Xunhua Zheng; Tingting Liao; Nicolas Brüggemann; Klaus Butterbach-Bahl
Journal:  Environ Sci Technol       Date:  2011-06-16       Impact factor: 9.028

8.  Measurement of the oxygen isotopic composition of nitrate in seawater and freshwater using the denitrifier method.

Authors:  K L Casciotti; D M Sigman; M Galanter Hastings; J K Böhlke; A Hilkert
Journal:  Anal Chem       Date:  2002-10-01       Impact factor: 6.986

9.  Tracing atmospheric nitrate deposition in a complex semiarid ecosystem using delta17O.

Authors:  Greg Michalski; Thomas Meixner; Mark Fenn; Larry Hernandez; Abby Sirulnik; Edith Allen; Mark Thiemens
Journal:  Environ Sci Technol       Date:  2004-04-01       Impact factor: 9.028

10.  On the fate of anthropogenic nitrogen.

Authors:  William H Schlesinger
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-31       Impact factor: 11.205

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  23 in total

1.  Scale-dependent linkages between nitrate isotopes and denitrification in surface soils: implications for isotope measurements and models.

Authors:  Steven J Hall; Samantha R Weintraub; David R Bowling
Journal:  Oecologia       Date:  2016-04-21       Impact factor: 3.225

2.  Isotopic advances in understanding reactive nitrogen deposition and atmospheric processing.

Authors:  Emily M Elliott; Zhongjie Yu; Amanda S Cole; Justin G Coughlin
Journal:  Sci Total Environ       Date:  2018-12-12       Impact factor: 7.963

3.  Total and denitrifying bacterial communities associated with the interception of nitrate leaching by carbon amendment in the subsoil.

Authors:  Chen Chen; Hui Han; Ya Meng; Haiqing Gong; Rui Jia; Ting Xu; Guo-Chun Ding; Ji Li
Journal:  Appl Microbiol Biotechnol       Date:  2021-03-02       Impact factor: 4.813

4.  Coupled molecular and isotopic evidence for denitrifier controls over terrestrial nitrogen availability.

Authors:  Erin F E Lennon; Benjamin Z Houlton
Journal:  ISME J       Date:  2016-12-09       Impact factor: 10.302

5.  Diverse nirS-type Denitrifying Bacteria Contribute to Vital Nitrogen Loss in Natural Acidic Red Soils.

Authors:  Jiaqi Ye; Jiapeng Wu; Yiguo Hong
Journal:  Curr Microbiol       Date:  2022-08-16       Impact factor: 2.343

6.  Wet nitrogen (N) deposition to urban Latin America: filling in the gaps with GEOS-Chem.

Authors:  Alexandra G Ponette-González; Haley Lewis; Barron H Henderson; Danilo Carnelos; Gervasio Piñeiro; Kathleen C Weathers; Donna B Schwede
Journal:  Atmos Environ (1994)       Date:  2022-06-01       Impact factor: 5.755

7.  The fate of fertilizer nitrogen in a high nitrate accumulated agricultural soil.

Authors:  Zhi Quan; Bin Huang; Caiyan Lu; Yi Shi; Xin Chen; Haiyang Zhang; Yunting Fang
Journal:  Sci Rep       Date:  2016-02-12       Impact factor: 4.379

8.  Varying sensitivity of mountainous streamwater base-flow [Formula: see text]concentrations to N deposition in the northern suburbs of Tokyo.

Authors:  Kazuya Nishina; Mirai Watanabe; Masami K Koshikawa; Takejiro Takamatsu; Yu Morino; Tatsuya Nagashima; Kunika Soma; Seiji Hayashi
Journal:  Sci Rep       Date:  2017-08-09       Impact factor: 4.379

9.  Evidence for fungal and chemodenitrification based N2O flux from nitrogen impacted coastal sediments.

Authors:  Scott D Wankel; Wiebke Ziebis; Carolyn Buchwald; Chawalit Charoenpong; Dirk de Beer; Jane Dentinger; Zhenjiang Xu; Karsten Zengler
Journal:  Nat Commun       Date:  2017-06-05       Impact factor: 14.919

10.  Bryophytes and Organic layers Control Uptake of Airborne Nitrogen in Low-N Environments.

Authors:  Alexandra Bähring; Andreas Fichtner; Uta Friedrich; Goddert von Oheimb; Werner Härdtle
Journal:  Front Plant Sci       Date:  2017-12-04       Impact factor: 5.753

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