Literature DB >> 25597998

Auxiliary iron-sulfur cofactors in radical SAM enzymes.

Nicholas D Lanz1, Squire J Booker2.   

Abstract

A vast number of enzymes are now known to belong to a superfamily known as radical SAM, which all contain a [4Fe-4S] cluster ligated by three cysteine residues. The remaining, unligated, iron ion of the cluster binds in contact with the α-amino and α-carboxylate groups of S-adenosyl-l-methionine (SAM). This binding mode facilitates inner-sphere electron transfer from the reduced form of the cluster into the sulfur atom of SAM, resulting in a reductive cleavage of SAM to methionine and a 5'-deoxyadenosyl radical. The 5'-deoxyadenosyl radical then abstracts a target substrate hydrogen atom, initiating a wide variety of radical-based transformations. A subset of radical SAM enzymes contains one or more additional iron-sulfur clusters that are required for the reactions they catalyze. However, outside of a subset of sulfur insertion reactions, very little is known about the roles of these additional clusters. This review will highlight the most recent advances in the identification and characterization of radical SAM enzymes that harbor auxiliary iron-sulfur clusters. This article is part of a Special Issue entitled: Fe/S proteins: Analysis, structure, function, biogenesis and diseases.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Cofactor maturation; Iron–sulfur cluster; Radical SAM; Radical-dependent post-translational modification; S-adenosylmethionine; SPASM/twitch domain

Mesh:

Substances:

Year:  2015        PMID: 25597998     DOI: 10.1016/j.bbamcr.2015.01.002

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  37 in total

1.  Redox Chemistry in the Genome: Emergence of the [4Fe4S] Cofactor in Repair and Replication.

Authors:  Jacqueline K Barton; Rebekah M B Silva; Elizabeth O'Brien
Journal:  Annu Rev Biochem       Date:  2019-06-20       Impact factor: 23.643

2.  The A-type domain in Escherichia coli NfuA is required for regenerating the auxiliary [4Fe-4S] cluster in Escherichia coli lipoyl synthase.

Authors:  Erin L McCarthy; Ananda N Rankin; Zerick R Dill; Squire J Booker
Journal:  J Biol Chem       Date:  2018-12-11       Impact factor: 5.157

Review 3.  Formation and Cleavage of C-C Bonds by Enzymatic Oxidation-Reduction Reactions.

Authors:  F Peter Guengerich; Francis K Yoshimoto
Journal:  Chem Rev       Date:  2018-06-22       Impact factor: 60.622

4.  Structural Properties and Catalytic Implications of the SPASM Domain Iron-Sulfur Clusters in Methylorubrum extorquens PqqE.

Authors:  Wen Zhu; Lindsey M Walker; Lizhi Tao; Anthony T Iavarone; Xuetong Wei; R David Britt; Sean J Elliott; Judith P Klinman
Journal:  J Am Chem Soc       Date:  2020-07-09       Impact factor: 15.419

Review 5.  Radical S-Adenosylmethionine Enzymes Involved in RiPP Biosynthesis.

Authors:  Nilkamal Mahanta; Graham A Hudson; Douglas A Mitchell
Journal:  Biochemistry       Date:  2017-09-22       Impact factor: 3.162

6.  A biochemical sulfur delivery service.

Authors:  Amy C Rosenzweig
Journal:  Science       Date:  2017-10-20       Impact factor: 47.728

7.  Biochemical and Spectroscopic Characterization of a Radical S-Adenosyl-L-methionine Enzyme Involved in the Formation of a Peptide Thioether Cross-Link.

Authors:  Nathan A Bruender; Jarett Wilcoxen; R David Britt; Vahe Bandarian
Journal:  Biochemistry       Date:  2016-04-01       Impact factor: 3.162

8.  Assembly of the [4Fe-4S] cluster of NFU1 requires the coordinated donation of two [2Fe-2S] clusters from the scaffold proteins, ISCU2 and ISCA1.

Authors:  Anshika Jain; Anamika Singh; Nunziata Maio; Tracey A Rouault
Journal:  Hum Mol Genet       Date:  2020-11-25       Impact factor: 6.150

Review 9.  Viperin: An ancient radical SAM enzyme finds its place in modern cellular metabolism and innate immunity.

Authors:  Soumi Ghosh; E Neil G Marsh
Journal:  J Biol Chem       Date:  2020-06-16       Impact factor: 5.157

10.  First Step in Catalysis of the Radical S-Adenosylmethionine Methylthiotransferase MiaB Yields an Intermediate with a [3Fe-4S]0-Like Auxiliary Cluster.

Authors:  Bo Zhang; Arthur J Arcinas; Matthew I Radle; Alexey Silakov; Squire J Booker; Carsten Krebs
Journal:  J Am Chem Soc       Date:  2020-01-16       Impact factor: 15.419

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