Literature DB >> 29143186

Identification of an anellovirus and genomoviruses in ixodid ticks.

Kara Waits1, Marten J Edwards2, Ilaria N Cobb3, Rafaela S Fontenele1, Arvind Varsani4,5.   

Abstract

Ticks are blood-feeding arachnids that are vectors of several important human and animal pathogens. Little is known about single-stranded DNA (ssDNA) viruses that are associated with these ectoparasites. As part of a pilot study to identify ssDNA viruses present in ticks, female American dog ticks (Dermacentor variabilis) and blacklegged ticks (Ixodes scapularis) were collected in eastern Pennsylvania (USA), and the extracted viral DNA was analyzed using viral metagenomics approaches. Three genomoviruses were recovered from pooled samples of D. variabilis (n = 2) and I. scapularis (n = 1): two belonging to the genus Gemycircularvirus, sharing < 63% pairwise identity with other members within the genus; and the third belonging to the genus Gemykolovirus, sharing < 70% pairwise identity to other gemykoloviruses. Furthermore, a genome of an anellovirus belonging to the sharing 62-65% nucleotide identity with torque teno canis viruses (genus Thetatorquevirus) was also recovered from a D. variabilis pooled sample.

Entities:  

Keywords:  Anelloviridae; Dermacentor variabilis; Genomoviridae; Ixodes scapularis; Ixodid ticks

Mesh:

Year:  2017        PMID: 29143186     DOI: 10.1007/s11262-017-1520-5

Source DB:  PubMed          Journal:  Virus Genes        ISSN: 0920-8569            Impact factor:   2.332


  24 in total

1.  Relatively low prevalence of Babesia microti and Anaplasma phagocytophilum in Ixodes scapularis ticks collected in the Lehigh Valley region of eastern Pennsylvania.

Authors:  Marten J Edwards; Laura A Barbalato; Amulya Makkapati; Katerina D Pham; Louise M Bugbee
Journal:  Ticks Tick Borne Dis       Date:  2015-08-05       Impact factor: 3.744

2.  Novel circular DNA viruses identified in Procordulia grayi and Xanthocnemis zealandica larvae using metagenomic approaches.

Authors:  Anisha Dayaram; Mark Galatowitsch; Jon S Harding; Gerardo R Argüello-Astorga; Arvind Varsani
Journal:  Infect Genet Evol       Date:  2014-01-23       Impact factor: 3.342

3.  Circular replication-associated protein encoding DNA viruses identified in the faecal matter of various animals in New Zealand.

Authors:  Olivia Steel; Simona Kraberger; Alyssa Sikorski; Laura M Young; Ryan J Catchpole; Aaron J Stevens; Jenny J Ladley; Dorien S Coray; Daisy Stainton; Anisha Dayaram; Laurel Julian; Katherine van Bysterveldt; Arvind Varsani
Journal:  Infect Genet Evol       Date:  2016-05-20       Impact factor: 3.342

Review 4.  Transmission and evolution of tick-borne viruses.

Authors:  Doug E Brackney; Philip M Armstrong
Journal:  Curr Opin Virol       Date:  2016-08-28       Impact factor: 7.090

Review 5.  Classification of TTV and related viruses (anelloviruses).

Authors:  P Biagini
Journal:  Curr Top Microbiol Immunol       Date:  2009       Impact factor: 4.291

6.  Genomoviridae: a new family of widespread single-stranded DNA viruses.

Authors:  Mart Krupovic; Said A Ghabrial; Daohong Jiang; Arvind Varsani
Journal:  Arch Virol       Date:  2016-06-24       Impact factor: 2.574

7.  SDT: a virus classification tool based on pairwise sequence alignment and identity calculation.

Authors:  Brejnev Muhizi Muhire; Arvind Varsani; Darren Patrick Martin
Journal:  PLoS One       Date:  2014-09-26       Impact factor: 3.240

8.  Complete Genome Sequence of a Genomovirus Associated with Common Bean Plant Leaves in Brazil.

Authors:  Natalia Silva Lamas; Rafaela Salgado Fontenele; Fernando Lucas Melo; Antonio Felix Costa; Arvind Varsani; Simone Graça Ribeiro
Journal:  Genome Announc       Date:  2016-11-10

9.  Diverse and highly recombinant anelloviruses associated with Weddell seals in Antarctica.

Authors:  Elizabeth Fahsbender; Jennifer M Burns; Stacy Kim; Simona Kraberger; Greg Frankfurter; Alice A Eilers; Michelle R Shero; Roxanne Beltran; Amy Kirkham; Robert McCorkell; Rachel K Berngartt; Maketalena F Male; Grant Ballard; David G Ainley; Mya Breitbart; Arvind Varsani
Journal:  Virus Evol       Date:  2017-07-19

10.  Genomovirus Genomes Recovered from Echinothrips americanus Sampled in Florida, USA.

Authors:  Simona Kraberger; Jane E Polston; Heather M Capobianco; Ricardo I Alcalá-Briseño; Rafaela S Fontenele; Arvind Varsani
Journal:  Genome Announc       Date:  2017-05-25
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  6 in total

1.  Family Genomoviridae: 2021 taxonomy update.

Authors:  Arvind Varsani; Mart Krupovic
Journal:  Arch Virol       Date:  2021-07-31       Impact factor: 2.574

2.  Genome Sequences of Two Single-Stranded DNA Viruses Identified in Varroa destructor.

Authors:  Simona Kraberger; Gabriel A Visnovsky; Ron F van Toor; Maketalena F Male; Kara Waits; Rafaela S Fontenele; Arvind Varsani
Journal:  Genome Announc       Date:  2018-03-01

3.  Virus discovery in all three major lineages of terrestrial arthropods highlights the diversity of single-stranded DNA viruses associated with invertebrates.

Authors:  Karyna Rosario; Kaitlin A Mettel; Bayleigh E Benner; Ryan Johnson; Catherine Scott; Sohath Z Yusseff-Vanegas; Christopher C M Baker; Deby L Cassill; Caroline Storer; Arvind Varsani; Mya Breitbart
Journal:  PeerJ       Date:  2018-10-11       Impact factor: 2.984

4.  Unravelling the Single-Stranded DNA Virome of the New Zealand Blackfly.

Authors:  Simona Kraberger; Kara Schmidlin; Rafaela S Fontenele; Matthew Walters; Arvind Varsani
Journal:  Viruses       Date:  2019-06-08       Impact factor: 5.048

5.  Identification of the Viral Determinant of Hypovirulence and Host Range in Sclerotiniaceae of a Genomovirus Reconstructed from the Plant Metagenome.

Authors:  Chenchen Feng; Jiuhuan Feng; Ziyi Wang; Connor Pedersen; Xiuqing Wang; Huma Saleem; Leslie Domier; Shin-Yi Lee Marzano
Journal:  J Virol       Date:  2021-08-10       Impact factor: 5.103

6.  Full-length genome sequence of segmented RNA virus from ticks was obtained using small RNA sequencing data.

Authors:  Xiaofeng Xu; Jinlong Bei; Yibo Xuan; Jiayuan Chen; Defu Chen; Stephen C Barker; Samuel Kelava; Xiaoai Zhang; Shan Gao; Ze Chen
Journal:  BMC Genomics       Date:  2020-09-16       Impact factor: 3.969

  6 in total

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