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Literature DB >> 25565025

Roles for noncoding RNAs in cell-fate determination and regeneration.

Abstract

Cellular fate is determined by transcriptional networks and epigenetic states. In addition to protein factors, noncoding RNAs (ncRNAs), particularly microRNAs and long ncRNAs, are able to remodel transcriptional circuits and reshape epigenetic landscapes. Here we draw upon recent findings to discuss the emerging roles of these ncRNAs in cellular reprogramming, transdifferentiation and organ regeneration.

Mesh：

Substances：
RNA, Untranslated

Year: 2015 PMID： 25565025 DOI： 10.1038/nsmb.2946

Source DB: PubMed Journal: Nat Struct Mol Biol ISSN： 1545-9985 Impact factor: 15.369

25 in total

Review 1. The mechanics of miRNA-mediated gene silencing: a look under the hood of miRISC.

Authors: Marc R Fabian; Nahum Sonenberg
Journal: Nat Struct Mol Biol Date: 2012-06-05 Impact factor: 15.369

2. MicroRNA-mediated in vitro and in vivo direct reprogramming of cardiac fibroblasts to cardiomyocytes.

Authors: Tilanthi M Jayawardena; Bakytbek Egemnazarov; Elizabeth A Finch; Lunan Zhang; J Alan Payne; Kumar Pandya; Zhiping Zhang; Paul Rosenberg; Maria Mirotsou; Victor J Dzau
Journal: Circ Res Date: 2012-04-26 Impact factor: 17.367

3. Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses.

Authors: Moran N Cabili; Cole Trapnell; Loyal Goff; Magdalena Koziol; Barbara Tazon-Vega; Aviv Regev; John L Rinn
Journal: Genes Dev Date: 2011-09-02 Impact factor: 11.361

4. Reprogramming of human fibroblasts toward a cardiac fate.

Authors: Young-Jae Nam; Kunhua Song; Xiang Luo; Edward Daniel; Kaleb Lambeth; Katherine West; Joseph A Hill; J Michael DiMaio; Linda A Baker; Rhonda Bassel-Duby; Eric N Olson
Journal: Proc Natl Acad Sci U S A Date: 2013-03-04 Impact factor: 11.205

5. How to train your dragon: targeted delivery of microRNA to cancer cells in vivo.

Authors: Marcin Kortylewski; Sergey Nechaev
Journal: Mol Ther Date: 2014-06 Impact factor: 11.454

Review 6. Long noncoding RNAs in cell-fate programming and reprogramming.

Authors: Ryan A Flynn; Howard Y Chang
Journal: Cell Stem Cell Date: 2014-06-05 Impact factor: 24.633

7. Highly efficient miRNA-mediated reprogramming of mouse and human somatic cells to pluripotency.

Authors: Frederick Anokye-Danso; Chinmay M Trivedi; Denise Juhr; Mudit Gupta; Zheng Cui; Ying Tian; Yuzhen Zhang; Wenli Yang; Peter J Gruber; Jonathan A Epstein; Edward E Morrisey
Journal: Cell Stem Cell Date: 2011-04-08 Impact factor: 24.633

8. Zebrafish heart regeneration occurs by cardiomyocyte dedifferentiation and proliferation.

Authors: Chris Jopling; Eduard Sleep; Marina Raya; Mercè Martí; Angel Raya; Juan Carlos Izpisúa Belmonte
Journal: Nature Date: 2010-03-25 Impact factor: 49.962

Review 9. MicroRNAs: key regulators of stem cells.

Authors: Vamsi K Gangaraju; Haifan Lin
Journal: Nat Rev Mol Cell Biol Date: 2009-02 Impact factor: 94.444

10. An integrated encyclopedia of DNA elements in the human genome.

Authors:
Journal: Nature Date: 2012-09-06 Impact factor: 49.962

12 in total

Review 1. Ground rules of the pluripotency gene regulatory network.

Authors: Mo Li; Juan Carlos Izpisua Belmonte
Journal: Nat Rev Genet Date: 2017-01-03 Impact factor: 53.242

2. An integrated expression atlas of miRNAs and their promoters in human and mouse.

Authors: Derek de Rie; Imad Abugessaisa; Tanvir Alam; Erik Arner; Peter Arner; Haitham Ashoor; Gaby Åström; Magda Babina; Nicolas Bertin; A Maxwell Burroughs; Ailsa J Carlisle; Carsten O Daub; Michael Detmar; Ruslan Deviatiiarov; Alexandre Fort; Claudia Gebhard; Daniel Goldowitz; Sven Guhl; Thomas J Ha; Jayson Harshbarger; Akira Hasegawa; Kosuke Hashimoto; Meenhard Herlyn; Peter Heutink; Kelly J Hitchens; Chung Chau Hon; Edward Huang; Yuri Ishizu; Chieko Kai; Takeya Kasukawa; Peter Klinken; Timo Lassmann; Charles-Henri Lecellier; Weonju Lee; Marina Lizio; Vsevolod Makeev; Anthony Mathelier; Yulia A Medvedeva; Niklas Mejhert; Christopher J Mungall; Shohei Noma; Mitsuhiro Ohshima; Mariko Okada-Hatakeyama; Helena Persson; Patrizia Rizzu; Filip Roudnicky; Pål Sætrom; Hiroki Sato; Jessica Severin; Jay W Shin; Rolf K Swoboda; Hiroshi Tarui; Hiroo Toyoda; Kristoffer Vitting-Seerup; Louise Winteringham; Yoko Yamaguchi; Kayoko Yasuzawa; Misako Yoneda; Noriko Yumoto; Susan Zabierowski; Peter G Zhang; Christine A Wells; Kim M Summers; Hideya Kawaji; Albin Sandelin; Michael Rehli; Yoshihide Hayashizaki; Piero Carninci; Alistair R R Forrest; Michiel J L de Hoon
Journal: Nat Biotechnol Date: 2017-08-21 Impact factor: 54.908

Review 3. Noninvasive detection of gastric cancer.

Authors: Qin-Si Wan; Kun-He Zhang
Journal: Tumour Biol Date: 2016-07-06

Review 4. Long noncoding RNAs in gastric cancer: functions and clinical applications.

Authors: Jiajun Wang; Jingxu Sun; Jun Wang; Yongxi Song; Peng Gao; Jinxin Shi; Ping Chen; Zhenning Wang
Journal: Onco Targets Ther Date: 2016-02-10 Impact factor: 4.147

5. Genome-wide discovery of long intergenic noncoding RNAs and their epigenetic signatures in the rat.

Authors: Aimin Li; Zhong-Yin Zhou; Xinhong Hei; Newton O Otecko; Junying Zhang; Yajun Liu; Hongfang Zhou; Zhiqiang Zhao; Lei Wang
Journal: Sci Rep Date: 2017-11-01 Impact factor: 4.379

6. Construction of a lncRNA-mediated feed-forward loop network reveals global topological features and prognostic motifs in human cancers.

Authors: Shangwei Ning; Yue Gao; Peng Wang; Xiang Li; Hui Zhi; Yan Zhang; Yue Liu; Jizhou Zhang; Maoni Guo; Dong Han; Xia Li
Journal: Oncotarget Date: 2016-07-19

7. H19, a Long Non-coding RNA, Mediates Transcription Factors and Target Genes through Interference of MicroRNAs in Pan-Cancer.

Authors: Aimin Li; Saurav Mallik; Haidan Luo; Peilin Jia; Dung-Fang Lee; Zhongming Zhao
Journal: Mol Ther Nucleic Acids Date: 2020-05-27 Impact factor: 8.886