Literature DB >> 25559557

Biochemical characterization of RecA variants that contribute to extreme resistance to ionizing radiation.

Joseph R Piechura1, Tzu-Ling Tseng2, Hsin-Fang Hsu2, Rose T Byrne1, Tricia A Windgassen3, Sindhu Chitteni-Pattu1, John R Battista4, Hung-Wen Li2, Michael M Cox5.   

Abstract

Among strains of Escherichia coli that have evolved to survive extreme exposure to ionizing radiation, mutations in the recA gene are prominent and contribute substantially to the acquired phenotype. Changes at amino acid residue 276, D276A and D276N, occur repeatedly and in separate evolved populations. RecA D276A and RecA D276N exhibit unique adaptations to an environment that can require the repair of hundreds of double strand breaks. These two RecA protein variants (a) exhibit a faster rate of filament nucleation on DNA, as well as a slower extension under at least some conditions, leading potentially to a distribution of the protein among a higher number of shorter filaments, (b) promote DNA strand exchange more efficiently in the context of a shorter filament, and (c) are markedly less inhibited by ADP. These adaptations potentially allow RecA protein to address larger numbers of double strand DNA breaks in an environment where ADP concentrations are higher due to a compromised cellular metabolism.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  DNA repair; Double strand break repair; Evolution; Radiation resistance; RecA protein

Mesh:

Substances:

Year:  2014        PMID: 25559557      PMCID: PMC4308431          DOI: 10.1016/j.dnarep.2014.12.001

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  86 in total

1.  Directed evolution of ionizing radiation resistance in Escherichia coli.

Authors:  Dennis R Harris; Steve V Pollock; Elizabeth A Wood; Reece J Goiffon; Audrey J Klingele; Eric L Cabot; Wendy Schackwitz; Joel Martin; Julie Eggington; Timothy J Durfee; Christina M Middle; Jason E Norton; Michael C Popelars; Hao Li; Sarit A Klugman; Lindsay L Hamilton; Lukas B Bane; Len A Pennacchio; Thomas J Albert; Nicole T Perna; Michael M Cox; John R Battista
Journal:  J Bacteriol       Date:  2009-06-05       Impact factor: 3.490

2.  Studying RecBCD helicase translocation along Chi-DNA using tethered particle motion with a stretching force.

Authors:  Hsiu-Fang Fan; Hung-Wen Li
Journal:  Biophys J       Date:  2009-03-04       Impact factor: 4.033

3.  Disassembly of Escherichia coli RecA E38K/DeltaC17 nucleoprotein filaments is required to complete DNA strand exchange.

Authors:  Rachel L Britt; Nami Haruta; Shelley L Lusetti; Sindhu Chitteni-Pattu; Ross B Inman; Michael M Cox
Journal:  J Biol Chem       Date:  2009-11-12       Impact factor: 5.157

4.  Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1.

Authors:  O White; J A Eisen; J F Heidelberg; E K Hickey; J D Peterson; R J Dodson; D H Haft; M L Gwinn; W C Nelson; D L Richardson; K S Moffat; H Qin; L Jiang; W Pamphile; M Crosby; M Shen; J J Vamathevan; P Lam; L McDonald; T Utterback; C Zalewski; K S Makarova; L Aravind; M J Daly; K W Minton; R D Fleischmann; K A Ketchum; K E Nelson; S Salzberg; H O Smith; J C Venter; C M Fraser
Journal:  Science       Date:  1999-11-19       Impact factor: 47.728

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Authors:  Jen-Fei Chu; Ta-Chau Chang; Hung-Wen Li
Journal:  Biophys J       Date:  2010-04-21       Impact factor: 4.033

6.  The active form of DNA polymerase V is UmuD'(2)C-RecA-ATP.

Authors:  Qingfei Jiang; Kiyonobu Karata; Roger Woodgate; Michael M Cox; Myron F Goodman
Journal:  Nature       Date:  2009-07-16       Impact factor: 49.962

7.  DdrB protein, an alternative Deinococcus radiodurans SSB induced by ionizing radiation.

Authors:  Cédric A Norais; Sindhu Chitteni-Pattu; Elizabeth A Wood; Ross B Inman; Michael M Cox
Journal:  J Biol Chem       Date:  2009-06-10       Impact factor: 5.157

8.  An SOS inhibitor that binds to free RecA protein: the PsiB protein.

Authors:  Vessela Petrova; Sindhu Chitteni-Pattu; Julia C Drees; Ross B Inman; Michael M Cox
Journal:  Mol Cell       Date:  2009-10-09       Impact factor: 17.970

9.  Recombination and replication in DNA repair of heavily irradiated Deinococcus radiodurans.

Authors:  Dea Slade; Ariel B Lindner; Gregory Paul; Miroslav Radman
Journal:  Cell       Date:  2009-03-20       Impact factor: 41.582

10.  Interconvertible lac repressor-DNA loops revealed by single-molecule experiments.

Authors:  Oi Kwan Wong; Martin Guthold; Dorothy A Erie; Jeff Gelles
Journal:  PLoS Biol       Date:  2008-09-30       Impact factor: 8.029

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  14 in total

Review 1.  Recent progress in understanding the molecular mechanisms of radioresistance in Deinococcus bacteria.

Authors:  Alexandra- Cristina Munteanu; Valentina Uivarosi; Adrian Andries
Journal:  Extremophiles       Date:  2015-06-04       Impact factor: 2.395

2.  Rad51 facilitates filament assembly of meiosis-specific Dmc1 recombinase.

Authors:  Wei-Hsuan Lan; Sheng-Yao Lin; Chih-Yuan Kao; Wen-Hsuan Chang; Hsin-Yi Yeh; Hao-Yen Chang; Peter Chi; Hung-Wen Li
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-13       Impact factor: 11.205

3.  Swi5-Sfr1 stimulates Rad51 recombinase filament assembly by modulating Rad51 dissociation.

Authors:  Chih-Hao Lu; Hsin-Yi Yeh; Guan-Chin Su; Kentaro Ito; Yumiko Kurokawa; Hiroshi Iwasaki; Peter Chi; Hung-Wen Li
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-08       Impact factor: 11.205

Review 4.  Conservation and diversity of radiation and oxidative stress resistance mechanisms in Deinococcus species.

Authors:  Sangyong Lim; Jong-Hyun Jung; Laurence Blanchard; Arjan de Groot
Journal:  FEMS Microbiol Rev       Date:  2019-01-01       Impact factor: 16.408

Review 5.  Experimental evolution of extremophile resistance to ionizing radiation.

Authors:  Steven T Bruckbauer; Michael M Cox
Journal:  Trends Genet       Date:  2021-06-01       Impact factor: 11.821

6.  Active displacement of RecA filaments by UvrD translocase activity.

Authors:  Vessela Petrova; Stefanie H Chen; Eileen T Molzberger; Eric Tomko; Sindhu Chitteni-Pattu; Haifeng Jia; Yerdos Ordabayev; Timothy M Lohman; Michael M Cox
Journal:  Nucleic Acids Res       Date:  2015-03-30       Impact factor: 16.971

7.  Recombinational branch migration by the RadA/Sms paralog of RecA in Escherichia coli.

Authors:  Deani L Cooper; Susan T Lovett
Journal:  Elife       Date:  2016-02-04       Impact factor: 8.140

8.  Darwinism for the Genomic Age: Connecting Mutation to Diversification.

Authors:  Xia Hua; Lindell Bromham
Journal:  Front Genet       Date:  2017-02-07       Impact factor: 4.599

9.  Stable Nuclei of Nucleoprotein Filament and High ssDNA Binding Affinity Contribute to Enhanced RecA E38K Recombinase Activity.

Authors:  Chih-Hao Lu; Ting-Tzu Chang; Chia-Chuan Cho; Hui-Cin Lin; Hung-Wen Li
Journal:  Sci Rep       Date:  2017-11-02       Impact factor: 4.379

10.  DNA Metabolism in Balance: Rapid Loss of a RecA-Based Hyperrec Phenotype.

Authors:  Irina V Bakhlanova; Alexandra V Dudkina; Elizabeth A Wood; Vladislav A Lanzov; Michael M Cox; Dmitry M Baitin
Journal:  PLoS One       Date:  2016-04-28       Impact factor: 3.240

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