Literature DB >> 25548868

Recovery of adult zebrafish hearts for high-throughput applications.

Rima Arnaout1, Sven Reischauer2, Didier Y R Stainier2.   

Abstract

Use of the zebrafish model system for studying development, regeneration, and disease is expanding toward use of adult hearts for cell dissociation and purification of RNA, DNA, and proteins. All of these applications demand the rapid recovery of significant numbers of zebrafish hearts to avoid gene regulatory, metabolic, and other changes that begin after death. Adult zebrafish hearts are also required for studying heart structure for a variety of mutants and for studying heart regeneration. However, the traditional zebrafish heart dissection is slow and difficult and requires specialized tools, making large-scale dissection of adult zebrafish hearts tedious. Traditional methods also harbor the risk of damaging the heart during the dissection. Here, we describe a method for dissection of adult zebrafish hearts that is fast, reproducible, and preserves heart architecture. Furthermore, this method does not require specialized tools, is painless for the zebrafish, can be performed on fresh or fixed specimens, and can be performed on zebrafish as young as one month old. The approach described expands the use of adult zebrafish for cardiovascular research.

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Year:  2014        PMID: 25548868      PMCID: PMC4396955          DOI: 10.3791/52248

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  9 in total

Review 1.  Getting to the heart of regeneration in zebrafish.

Authors:  Kenneth D Poss
Journal:  Semin Cell Dev Biol       Date:  2006-11-24       Impact factor: 7.727

2.  Heart dissection in larval, juvenile and adult zebrafish, Danio rerio.

Authors:  Corinna Singleman; Nathalia G Holtzman
Journal:  J Vis Exp       Date:  2011-09-30       Impact factor: 1.355

3.  Dissection of organs from the adult zebrafish.

Authors:  Tripti Gupta; Mary C Mullins
Journal:  J Vis Exp       Date:  2010-03-04       Impact factor: 1.355

4.  Translational profiling of cardiomyocytes identifies an early Jak1/Stat3 injury response required for zebrafish heart regeneration.

Authors:  Yi Fang; Vikas Gupta; Ravi Karra; Jennifer E Holdway; Kazu Kikuchi; Kenneth D Poss
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-30       Impact factor: 11.205

5.  Zebrafish model for human long QT syndrome.

Authors:  Rima Arnaout; Tania Ferrer; Jan Huisken; Kenneth Spitzer; Didier Y R Stainier; Martin Tristani-Firouzi; Neil C Chi
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-25       Impact factor: 11.205

Review 6.  RNA-Seq: a revolutionary tool for transcriptomics.

Authors:  Zhong Wang; Mark Gerstein; Michael Snyder
Journal:  Nat Rev Genet       Date:  2009-01       Impact factor: 53.242

7.  Fluorescence-activated cell sorting (FACS) of fluorescently tagged cells from zebrafish larvae for RNA isolation.

Authors:  Martha Manoli; Wolfgang Driever
Journal:  Cold Spring Harb Protoc       Date:  2012-08-01

8.  Global analysis of the haematopoietic and endothelial transcriptome during zebrafish development.

Authors:  J E Cannon; E S Place; A M J Eve; C R Bradshaw; A Sesay; N W Morrell; J C Smith
Journal:  Mech Dev       Date:  2012-10-13       Impact factor: 1.882

9.  Genetic and physiologic dissection of the vertebrate cardiac conduction system.

Authors:  Neil C Chi; Robin M Shaw; Benno Jungblut; Jan Huisken; Tania Ferrer; Rima Arnaout; Ian Scott; Dimitris Beis; Tong Xiao; Herwig Baier; Lily Y Jan; Martin Tristani-Firouzi; Didier Y R Stainier
Journal:  PLoS Biol       Date:  2008-05-13       Impact factor: 8.029

  9 in total
  6 in total

Review 1.  LITTLE FISH, BIG DATA: ZEBRAFISH AS A MODEL FOR CARDIOVASCULAR AND METABOLIC DISEASE.

Authors:  Philipp Gut; Sven Reischauer; Didier Y R Stainier; Rima Arnaout
Journal:  Physiol Rev       Date:  2017-07-01       Impact factor: 37.312

2.  Dissection of Larval Zebrafish Gonadal Tissue.

Authors:  Xinjian Wang; Sijie Chen; Wei Zhang; Yiyuan Ren; Quan Zhang; Gang Peng
Journal:  J Vis Exp       Date:  2017-04-26       Impact factor: 1.355

3.  Hspb7 is a cardioprotective chaperone facilitating sarcomeric proteostasis.

Authors:  Emily J Mercer; Yi-Fan Lin; Leona Cohen-Gould; Todd Evans
Journal:  Dev Biol       Date:  2018-01-10       Impact factor: 3.582

4.  Extraction Protocols for Individual Zebrafish's Ventricle Myosin and Skeletal Muscle Actin for In vitro Motility Assays.

Authors:  Lisa-Mareike Scheid; Cornelia Weber; Nasrin Bopp; Matias Mosqueira; Rainer H A Fink
Journal:  Front Physiol       Date:  2017-05-31       Impact factor: 4.566

5.  A mutation in the atrial-specific myosin light chain gene (MYL4) causes familial atrial fibrillation.

Authors:  Nathan Orr; Rima Arnaout; Lorne J Gula; Danna A Spears; Peter Leong-Sit; Qiuju Li; Wadea Tarhuni; Sven Reischauer; Vijay S Chauhan; Matthew Borkovich; Shaheen Uppal; Arnon Adler; Shaun R Coughlin; Didier Y R Stainier; Michael H Gollob
Journal:  Nat Commun       Date:  2016-04-12       Impact factor: 14.919

6.  Distinct myocardial lineages break atrial symmetry during cardiogenesis in zebrafish.

Authors:  Almary Guerra; Raoul Fv Germano; Oliver Stone; Rima Arnaout; Stefan Guenther; Suchit Ahuja; Verónica Uribe; Benoit Vanhollebeke; Didier Yr Stainier; Sven Reischauer
Journal:  Elife       Date:  2018-05-15       Impact factor: 8.140

  6 in total

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