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Literature DB >> 25533516

Electro-optical detection of single λ-DNA.

Shuo Liu¹, Thomas A Wall, Damla Ozcelik, Joshua W Parks, Aaron R Hawkins, Holger Schmidt.

Abstract

Single λ-DNA molecules are detected on a nanopore-gated optofluidic chip electrically and optically. Statistical variations in the single particle trajectories are used to predict the intensity distribution of the fluorescence signals.

Entities: Chemical Species

Mesh：

Substances：
DNA, Viral

Year: 2015 PMID： 25533516 PMCID： PMC4304986 DOI： 10.1039/c4cc07591a

Source DB: PubMed Journal: Chem Commun (Camb) ISSN： 1359-7345 Impact factor: 6.222

25 in total

1. Diffusion coefficient of DNA molecules during free solution electrophoresis.

Authors: A E Nkodo; J M Garnier; B Tinland; H Ren; C Desruisseaux; L C McCormick; G Drouin; G W Slater
Journal: Electrophoresis Date: 2001-08 Impact factor: 3.535

2. Translocation of double-strand DNA through a silicon oxide nanopore.

Authors: A J Storm; J H Chen; H W Zandbergen; C Dekker
Journal: Phys Rev E Stat Nonlin Soft Matter Phys Date: 2005-05-06

3. Planar optofluidic chip for single particle detection, manipulation, and analysis.

Authors: Dongliang Yin; Evan J Lunt; Mikhail I Rudenko; David W Deamer; Aaron R Hawkins; Holger Schmidt
Journal: Lab Chip Date: 2007-06-27 Impact factor: 6.799

4. Continuous base identification for single-molecule nanopore DNA sequencing.

Authors: James Clarke; Hai-Chen Wu; Lakmal Jayasinghe; Alpesh Patel; Stuart Reid; Hagan Bayley
Journal: Nat Nanotechnol Date: 2009-02-22 Impact factor: 39.213

Review 5. Nanopore analytics: sensing of single molecules.

Authors: Stefan Howorka; Zuzanna Siwy
Journal: Chem Soc Rev Date: 2009-06-15 Impact factor: 54.564

6. Optofluidic waveguides: II. Fabrication and structures.

Authors: Aaron R Hawkins; Holger Schmidt
Journal: Microfluid Nanofluidics Date: 2007-07-19 Impact factor: 2.529

7. Electrostatic focusing of unlabelled DNA into nanoscale pores using a salt gradient.

Authors: Meni Wanunu; Will Morrison; Yitzhak Rabin; Alexander Y Grosberg; Amit Meller
Journal: Nat Nanotechnol Date: 2009-12-20 Impact factor: 39.213

8. Hybrid optofluidic integration.

Authors: Joshua W Parks; Hong Cai; Lynnell Zempoaltecatl; Thomas D Yuzvinsky; Kaelyn Leake; Aaron R Hawkins; Holger Schmidt
Journal: Lab Chip Date: 2013-08-23 Impact factor: 6.799

Review 9. The potential and challenges of nanopore sequencing.

Authors: Daniel Branton; David W Deamer; Andre Marziali; Hagan Bayley; Steven A Benner; Thomas Butler; Massimiliano Di Ventra; Slaven Garaj; Andrew Hibbs; Xiaohua Huang; Stevan B Jovanovich; Predrag S Krstic; Stuart Lindsay; Xinsheng Sean Ling; Carlos H Mastrangelo; Amit Meller; John S Oliver; Yuriy V Pershin; J Michael Ramsey; Robert Riehn; Gautam V Soni; Vincent Tabard-Cossa; Meni Wanunu; Matthew Wiggin; Jeffery A Schloss
Journal: Nat Biotechnol Date: 2008-10 Impact factor: 54.908

10. Correlated electrical and optical analysis of single nanoparticles and biomolecules on a nanopore-gated optofluidic chip.

Authors: Shuo Liu; Yue Zhao; Joshua W Parks; David W Deamer; Aaron R Hawkins; Holger Schmidt
Journal: Nano Lett Date: 2014-07-11 Impact factor: 11.189

18 in total

1. Optofluidic wavelength division multiplexing for single-virus detection.

Authors: Damla Ozcelik; Joshua W Parks; Thomas A Wall; Matthew A Stott; Hong Cai; Joseph W Parks; Aaron R Hawkins; Holger Schmidt
Journal: Proc Natl Acad Sci U S A Date: 2015-10-05 Impact factor: 11.205

Review 2. Nanopore Sensing.

Authors: Wenqing Shi; Alicia K Friedman; Lane A Baker
Journal: Anal Chem Date: 2016-11-18 Impact factor: 6.986

Electro-optical detection of single λ-DNA.

1. Diffusion coefficient of DNA molecules during free solution electrophoresis.

2. Translocation of double-strand DNA through a silicon oxide nanopore.

3. Planar optofluidic chip for single particle detection, manipulation, and analysis.

4. Continuous base identification for single-molecule nanopore DNA sequencing.

Review 5. Nanopore analytics: sensing of single molecules.

6. Optofluidic waveguides: II. Fabrication and structures.

7. Electrostatic focusing of unlabelled DNA into nanoscale pores using a salt gradient.

8. Hybrid optofluidic integration.

Review 9. The potential and challenges of nanopore sequencing.

10. Correlated electrical and optical analysis of single nanoparticles and biomolecules on a nanopore-gated optofluidic chip.

1. Optofluidic wavelength division multiplexing for single-virus detection.

Review 2. Nanopore Sensing.

3. Multiplexed efficient on-chip sample preparation and sensitive amplification-free detection of Ebola virus.

4. Single-virus analysis through chip-based optical detection.

5. Optofluidic bioanalysis: fundamentals and applications.

6. Effects of Post-Etch Microstructures on the Optical Transmittance of Silica Ridge Waveguides.

7. Signal-to-noise Enhancement in Optical Detection of Single Viruses with Multi-spot Excitation.

8. Enhanced Detection of Single Viruses On-Chip via Hydrodynamic Focusing.

9. Optofluidic devices with integrated solid-state nanopores.

Review 10. Recent advances in integrated solid-state nanopore sensors.