Literature DB >> 25530636

A Model-Free Machine Learning Method for Risk Classification and Survival Probability Prediction.

Yuan Geng1, Wenbin Lu2, Hao Helen Zhang3.   

Abstract

Risk classification and survival probability prediction are two major goals in survival data analysis since they play an important role in patients' risk stratification, long-term diagnosis, and treatment selection. In this article, we propose a new model-free machine learning framework for risk classification and survival probability prediction based on weighted support vector machines. The new procedure does not require any specific parametric or semiparametric model assumption on data, and is therefore capable of capturing nonlinear covariate effects. We use numerous simulation examples to demonstrate finite sample performance of the proposed method under various settings. Applications to a glioma tumor data and a breast cancer gene expression survival data are shown to illustrate the new methodology in real data analysis.

Entities:  

Keywords:  Model-free; Risk classification; Support vector machines; Survival probability prediction

Year:  2014        PMID: 25530636      PMCID: PMC4266578          DOI: 10.1002/sta4.67

Source DB:  PubMed          Journal:  Stat        ISSN: 0038-9986


  9 in total

1.  Time-dependent ROC curves for censored survival data and a diagnostic marker.

Authors:  P J Heagerty; T Lumley; M S Pepe
Journal:  Biometrics       Date:  2000-06       Impact factor: 2.571

2.  Soft and hard classification by reproducing kernel Hilbert space methods.

Authors:  Grace Wahba
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-11       Impact factor: 11.205

3.  Partial Cox regression analysis for high-dimensional microarray gene expression data.

Authors:  Hongzhe Li; Jiang Gui
Journal:  Bioinformatics       Date:  2004-08-04       Impact factor: 6.937

4.  Buckley-James boosting for survival analysis with high-dimensional biomarker data.

Authors:  Zhu Wang; C Y Wang
Journal:  Stat Appl Genet Mol Biol       Date:  2010-06-08

5.  A Monte Carlo approach for change-point detection in the Cox proportional hazards model.

Authors:  Mengling Liu; Wenbin Lu; Yongzhao Shao
Journal:  Stat Med       Date:  2008-08-30       Impact factor: 2.373

6.  Cross-validated Cox regression on microarray gene expression data.

Authors:  Hans C van Houwelingen; Tako Bruinsma; Augustinus A M Hart; Laura J Van't Veer; Lodewyk F A Wessels
Journal:  Stat Med       Date:  2006-09-30       Impact factor: 2.373

7.  Analysis of survival data by the proportional odds model.

Authors:  S Bennett
Journal:  Stat Med       Date:  1983 Apr-Jun       Impact factor: 2.373

8.  Sufficient dimension reduction for censored regressions.

Authors:  Wenbin Lu; Lexin Li
Journal:  Biometrics       Date:  2010-09-28       Impact factor: 2.571

9.  Kernel Cox regression models for linking gene expression profiles to censored survival data.

Authors:  Hongzhe Li; Yihui Luan
Journal:  Pac Symp Biocomput       Date:  2003
  9 in total
  1 in total

Review 1.  A scoping methodological review of simulation studies comparing statistical and machine learning approaches to risk prediction for time-to-event data.

Authors:  Hayley Smith; Michael Sweeting; Tim Morris; Michael J Crowther
Journal:  Diagn Progn Res       Date:  2022-06-02
  1 in total

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