| Literature DB >> 25526565 |
Elena Horna-Terrón1, Alberto Pradilla-Dieste2, Cristina Sánchez-de-Diego3, Jesús Osada4.
Abstract
Thioredoxin domain-containing 5 (TXNDC5) is a member of the protein disulfide isomerase family, acting as a chaperone of endoplasmic reticulum under not fully characterized conditions As a result, TXNDC5 interacts with many cell proteins, contributing to their proper folding and correct formation of disulfide bonds through its thioredoxin domains. Moreover, it can also work as an electron transfer reaction, recovering the functional isoform of other protein disulfide isomerases, replacing reduced glutathione in its role. Finally, it also acts as a cellular adapter, interacting with the N-terminal domain of adiponectin receptor. As can be inferred from all these functions, TXNDC5 plays an important role in cell physiology; therefore, dysregulation of its expression is associated with oxidative stress, cell ageing and a large range of pathologies such as arthritis, cancer, diabetes, neurodegenerative diseases, vitiligo and virus infections. Its implication in all these important diseases has made TXNDC5 a susceptible biomarker or even a potential pharmacological target.Entities:
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Year: 2014 PMID: 25526565 PMCID: PMC4284777 DOI: 10.3390/ijms151223501
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
Figure 1Flow chart displaying the information collection process. Two different sources of data were used: Data from online bioinformatics databases and a search in PubMed. EndNote X1 (Thomson Reuters, New York, NY, USA). * Some references may appear in more than one section of the review.
Orthologs of the human TXNDC5 gene.
| Organism | Taxonomic Classification | Gene | Human Similarity |
|---|---|---|---|
| Chimpanzee ( | Mammalia | 99.44 ( | |
| Mouse ( | Mammalia | 86.81 ( | |
| Rat ( | Mammalia | 85.83 ( | |
| Cow ( | Mammalia | 85.42 ( | |
| Dog ( | Mammalia | 85.91 ( | |
| Opossum ( | Mammalia | 78 ( | |
| Platypus ( | Mammalia | 69 ( | |
| Chicken ( | Aves | 74.53 ( | |
| Lizard ( | Reptilia | 66 ( | |
| African clawed frog ( | Amphibia | BC045245.1 | 76.01 ( |
| Tropical clawed frog ( | Amphibia | MGC75894 | 76.45 ( |
| Zebrafish ( | Actinopterygii | Dr.25420 | 76.05 ( |
| Rainbow trout ( | Actinopterygii | BX307368.1 | 75.21 ( |
| Sea squirt ( | Ascidiacea | Cin.2468 | 73.28 ( |
| Sea squirt ( | Ascidiacea | − | 44 ( |
| Fruit fly ( | Insecta | 54.83 ( | |
| Mosquito ( | Insecta | AgaP_AGAP000044 | 53.96 ( |
The percentage of similarity is shown followed by either (n) when the comparison was established using nucleic acid or (a) amino acid sequences, respectively.
Transcription factors found to control TXNDC5 gene expression [19,20].
| Transcription Factor | Biology Process | Tissue Expression |
|---|---|---|
| HTF or HER-2 | Growth factor receptor | Epithelial tissue |
| ATF6 | Leucine zipper in response to misfolded proteins via cAMP | Ubiquitous expression |
| XBP1 | Plasma cell differentiation in response to ER stress | Ubiquitous expression |
| Pax6 | Brain and eye morphogenesis | Developing sensory organs, central nervous system and endocrine system |
| ATF | Differentiation, proliferation and apoptosis | Ubiquitous expression |
| cMyb | Pro-oncogene | Ubiquitous expression |
| Max1 | Proliferation and apoptosis through H3 Lys-9 methyl-transferase complex | Ubiquitous expression |
| Arnt | PAH pro-carcinogen activator in response to hypoxia | Ubiquitous expression |
| USF1 | Cell differentiation and proliferation | Ubiquitous expression |
| FCHL (Familiar combined hyperlipidemia) transcription factor | Muscle and fat tissue |
Figure 2Scheme showing TXNDC5 domains. The graphic shows the three Trx-like domains, placed between amino acids 14–95, 118–221 and 251–355 [26].
Posttranslational modifications of TXNDC5 and participant amino acids.
| Modification | Modified Amino Acids | Prediction Server | References |
|---|---|---|---|
| Glycosylation | Thr (174, 304, 306), Ser (308) | DictyOGlyc | [ |
| Thr (174, 299, 302, 304, 306), Ser (183, 308) | NetOGlyc | [ | |
| No reports (*) | NetNGlyc | [ | |
| Acetylation | No reports (**) | NetAcet | [ |
| Mannosylation | No reports (***) | NetCGlyc | [ |
| Phosphorylation | Thr (138, 167, 174, 306, 335), Ser (62, 108, 125, 183, 285, 364, 392, 409, 412, 419), Tyr (106, 151,192, 289) | NetPhos | [ |
| Thr (174, 304, 306), Ser (62, 108, 125, 129, 183, 197, 238, 292, 308, 392, 409, 412, 419) | Phosida | [ | |
| Cys (89, 92, 217, 220, 350, 353) | GPS-SNO | [ | |
| Palmitoylation | Cys (220) | CSS-Palm | [ |
| Sumoylation | Lys (150, 241, 429) | GPS-SUMO | [ |
| Ubiquitination | Lys (33,68,71,78,116,169,206,208,149,303, 318,334,335, 337), Lys (41,68,71,78) | BDM-PUB | [ |
| CKSSAAP | [ |
* NetNGlyc reports no results, so there are no probable glycosylation sites in the N-terminal region of TXNDC5. Neither DictyOGlyc nor NetOGlyc report any glycosylation site in the N-terminal region; ** NetAct found no Ala, Gly, Ser or Thr to be susceptible to acetylation; *** No results were found using NetCGlyc. Mannosylation is uncommon in mammal proteins, and mainly affects SNC (notwithstanding brain) and skeletal muscle, tissues in which TXNDC5 is not synthesized. All predictions were made using bio-informatics tools that checked homology of TXNDC5 protein domains with experimental databases for the PTMs. The sequence used to predict the PTMs of TXNDC5 was the canonical sequence of isoform 1.
Protein interactions of TXNDC5 and cell processes involved.
| Biological Process | Proteins |
|---|---|
| Histone deacetylation | HdAFX, HDAC10, HDAC2 and RPD |
| Transcription factors | ATF, BZW1,GNAI3, ZNF207, ZNF706 and ZNHIT2 |
| Splicing | PRPF4 |
| Cell cycle control | CDK5 and VCP |
| Cell signaling | NENF (MAPK1/ERK2, MAPK3/ERK1 and ATK1/ATK phosphorylase), PPP1R2 (PP1 regulatory subunit (inhibitor)), Adipo-R1, AdipoR2, YWHANG and YWHAQ |
| Cell transport | YecS (amino acid and cys ABC transport) |
| Cell movement | CSE1L, DBN1 and WF1 |
| Ubiquitination | YOD1, HMG-20, CUL3, UBC, UBE2V1, UBXN1 and NPLOC4 |
| Neddylation | DCUN1D1 |
| Chaperones | HSP90AA1, TBCB, TGM2, TRMT1 and UNC45A |
| Carbohydrate metabolism | ALDOC, LDH and PGD |
| ATP | ATP6V1A |
| Amyloids | APP |
| Retrovirus | ENV |
These interactions have been discovered by co-sedimentation, coimmunoprecipitation, enzymatic studies and yeast-two hybrid system [8,12,49,50,51,52,53].
Interactions of TXNDC5 with different chemical compounds.
| Type of Agents | Compounds |
|---|---|
| Carcinogens | 2,3,7,8-Tetrachlorodibenzodioxine (herbicide), 4'-Diaminodiphenylmethane, Benzopyrene |
| Toxins | Aflatoxin B1 |
| Immunosuppressor | Cyclosporine A |
| K+ channel activator | Diazoside |
| Adrenaline analogous | Isoprenaline |
| ROS | Nitric oxide |
| Oxocarbon | Trimellitic anhydride |
| PPARα | Pirinixic acid |
| Non-steroid anti-inflammatory | Paracetamol |
| Antibiotics | Quinolones |
| Anti-epilepsy drug | Valproic acid |
| Metals | Zinc |
| Vitamins | Ascorbic acid |
Interactions among TXNDC5 and different organic and inorganic compounds, such as drugs and metabolites. All of them were experimentally discovered by different research groups [18,54,55,56].
Figure 3Current model of TXNDC5 interactions with different compounds. Panels (A) and (B) represent different angles of the docking assay using protein structure from Protein Data Bank [24]. First, many binding modes were generated by local and blind docking on the surface and in the cavities of the protein. Then, CHARMM (Chemistry at Harvard Macromolecules Mechanics) energies were estimated and most favorable energies were evaluated with FACTS (Fast Analytical Continuum Treatment of Solvation), clustered and visualized. Images show molecular coupling between TXNDC5 protein and the compounds cyclosporine A (blue), diazoside (red) and paracetamol (green). The interaction is mainly established within two domains of the protein involved in the action and its regulation [59,60].