| Literature DB >> 25517345 |
Geoffrey Férir1, Stephanie C Gordts2, Dominique Schols3.
Abstract
The glycoproteins on the surfaces of enveloped viruses, such as HIV, can be considered as a unique target for antiviral therapy. Different carbohydrate-binding agents (CBAs) target specific glycans present on viral glycoproteins of enveloped viruses. It has been shown that long-term CBA pressure in vitro can result in mutant HIV-1 isolates with several N-linked glycan deletions on gp120. These studies demonstrated that mainly high-mannose type glycans are deleted. However, interestingly, N241, N262 and N356 on gp120 have never been found to be affected after prolonged CBA exposure. Here, we review the mutation and (cross)-resistance profiles of eleven specific generated CBA-resistant HIV-1 strains. We observed that the broad-neutralizing anti-carbohydrate binding mAb 2G12 became completely inactive against all the generated CBA-resistant HIV-1 clade B isolates. In addition, all of the CBAs discussed in this review, with the exception of NICTABA, interfered with the binding of 2G12 mAb to gp120 expressed on HIV-1-infected T cells. The cross-resistance profiles of mutant HIV-1 strains are varying from increased susceptibility to very high resistance levels, even among different classes of CBAs with dissimilar sugar specificities or binding moieties [e.g., α(1,3), α(1,2), α(1,6)]. Recent studies demonstrated promising results in non-topical formulations (e.g., intranasally or subcutaneously), highlighting their potential for prevention (microbicides) and antiviral therapy.Entities:
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Year: 2014 PMID: 25517345 PMCID: PMC6270665 DOI: 10.3390/molecules191221085
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1(A) Examples of N-linked glycans present on gp120. (a) Oligomannose or high-mannose (Man9) type glycans, (b) hybrid type glycans, (c) tri- and (d) bi-antennary complex type glycans. N is asparagine; X is any amino acid except proline; S is serine and T is threonine. The abbreviations for the sugar units are: Fuc is fucose; Gal is galactose; GlcNAc is N-acetylglucosamine; Man is mannose and SA is sialic acid. The common pentasaccharide core unit is also marked in blue; (B) HIV-1 gp120 amino acid sequence and glycosylation sites. Alignment of the gp120 envelope protein sequences of the T cell line adapted HIV-1 strains IIIB and NL4.3. The N-glycosylation sites are shown in grey and the sequon numbers in red. The N397 glycan is not present in the viral strain we used due to the NSTWS sequence deletion as indicated in brackets. The N463 glycan is only present as N461 in our laboratory HIV-1 NL4.3 wild-type strain and not in the sequenced HIV-1 IIIB wild-type strain.
Mutations in HIV-1 gp120 appearing under selective CBA pressure in T cell cultures.
| Sequon a | N-glycan | NL4.32G12res. | IIIB2G12res. | IIIBHHAres. | IIIBGNAres. | IIIBAHres. | IIIBCV−Nres. | NL4.3CV−Nres. | NL4.3MVNres. | IIIBBanLecres. | IIIBGRFTres. | IIIBUDAres. |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NVT (N88) | “potential” complex | x | x | x | ||||||||
| NDT (N136) | “potential” complex | x | x | |||||||||
| NSS (N141) | “potential” complex | (NG) d | ||||||||||
| NCS (N156) | “potential” complex | |||||||||||
| NIS (N160) | “potential” complex | x | x | |||||||||
| NDT (N186) | “potential” complex | x | x e | |||||||||
| NTS (N197) | “potential” complex | |||||||||||
| NKT (N230) | high-mannose | x | x e | x | x | x | x | |||||
| NGT (N234) | high-mannose | x | x | x | x | x | ||||||
| NVS (N241) | high-mannose | |||||||||||
| NGS (N262) | high-mannose | |||||||||||
| NFT (N276) | “potential” complex | x | ||||||||||
| NQS (N289) | high-mannose | x | x | x e | x | x | ||||||
| NCT (N295) | high-mannose | x | x | x | x | x | x | x | ||||
| NNT (N301) | “potential” complex | x | x | x | ||||||||
| NIS (N332) | high-mannose | x | x | x | ||||||||
| NNT (N339) | high-mannose | x | x | x | x | x | x | |||||
| NKT (N356) | “potential” complex | |||||||||||
| NST (N386) | high-mannose | x | x e | x | x | x | ||||||
| NST (N392) | high-mannose | x | x | x e | x | x | x | x | ||||
| NST (N397) b | “potential” complex | |||||||||||
| NNT (N406) | “potential” complex | x | x b | x | ||||||||
| NIT (N448) | high-mannose | x | x | x | x | |||||||
| NES (N463) c | “potential” complex | (NG) d | ||||||||||
| Total | 1 | 3 | 8 | 7 | 12 | 6 | 3 | 4 | 6 | 5 | 9 | |
a: Assignment of glycosylation sites according to Leonard et al. [3]; b: The N397 glycan was not present in the wild-type IIIB strain throughout the AH resistance experiments due to the NSTWS sequence deletion as indicated in brackets in Figure 1B. Therefore, the N401 mutation found for the HIV-1 IIIBAHres. strain corresponds to the N406 according to Leonard et al. [3]; c: N463 is only present in the HIV-1 NL4.3 wild-type strain as N461 and not in the HIV-1 IIIB wild-type strain (1B); d: (NG): new glycan created; e: x are the N-linked glycan deletions used to calculate the fold-resistance for AH in Table 2.
Figure 2Positions of mutated N-linked glycans under selective CBA pressure. (a) Ribbon diagrams show the 24 N-linked glycosylation sites in recombinant (monomeric) gp120 of wild-type HIV-1 IIIB according to Leonard et al. [3] and Kwong et al. [11]. The green dots indicate the high-mannose type glycans and the yellow dots the hybrid/“potential” complex types. Recent findings by Doores et al. [8] and Bonomelli et al. [9] demonstrated that the glycan composition of recombinant monomeric gp120 differs greatly from that of trimeric gp120 present on infectious viral particles, of which the latter were used in the described resistance studies. Based on these data, the specific glycosylation assignments presented here are an overestimate of complex glycan content. Positions of the glycans deleted on gp120 under increasing concentrations of the following CBAs: (b) 2G12 mAb (NL4.3), (c) 2G12 mAb (IIIB), (d) HHA (IIIB), (e) GNA (IIIB), (f) AH (IIIB), (g) CV-N (IIIB), (h) CV-N (NL4.3), (i) MVN (NL4.3), (j) BanLec (IIIB), (k) GRFT (IIIB) and (l) UDA (IIIB) are marked with red dots. Figure 2a, reproduced with permission, from reference [12].
Resistance and cross-resistance profile of CBAs of in vitro generated CBA-resistant HIV-1 strains.
| CBAs | NL4.32G12res | IIIB2G12res | IIIBHHAres | IIIBGNAres | IIIBAHres | IIIBCV−Nres | NL4.3CV−Nres | NL4.3MVNres | IIIBBanLecres | IIIBGRFTres | IIIBUDAres |
|---|---|---|---|---|---|---|---|---|---|---|---|
| AH | N.D. a | N.D. | N.D. | N.D. | 19 b | N.D. | N.D. | N.D. | >66 | 118 | N.D. |
| MVN | 2 | N.D. | N.D. | N.D. | N.D. | N.D. | N.D. | >100 | N.D. | 4 | N.D. |
| 2G12 mAb | >50 | >36 | >15 | >15 | >25 | >45 | >45 | >38 | >25 | >35 | >29 |
| HHA | 12 | 2 | 919 | 490 | 1 | 17 | 4 | 3 | 3 | 5 | 117 |
| GNA | 6 | 1 | 926 | 581 | N.D. | 23 | 1 | 2 | N.D. | N.D. | 39 |
| BanLec | 1 | N.D. | N.D. | N.D. | N.D. | N.D. | N.D. | 5 | 24 | 13 | N.D. |
| GRFT | 10 | N.D. | N.D. | N.D. | N.D. | N.D. | N.D. | 14 | >106 | >1900 | N.D. |
| CV-N | 1 | 3 | 29 | 11 | N.D. | 20 | 7 | 4 | N.D. | N.D. | 83 |
| OAA | 3 | N.D. | N.D. | N.D. | N.D. | N.D. | N.D. | 2 | 2 | 2 | N.D. |
| UDA | 8 | N.D. | N.D. | N.D. | 1 | 1 | 3 | 3 | 1 | 3 | 24 |
Notes: a: N.D. Not determined; b: Legend fold resistance: the indicated colors describe the antiviral activity [more- (shown in blue) or less active (shown in green-yellow-orange and red)] of various CBAs against different in vitro generated CBA-resistant HIV-1 strains.
Figure 3Mechanisms of action of CBAs endowed with anti-HIV acitivity. Four different well-described infection pathways important in HIV pathogenesis, which are all efficiently inhibited by CBAs: (a) HIV-1 infection/replication assay; (b) giant cell or cocultivation assay; (c) HIV-1 DC-SIGN capture assay and (d) DC-SIGN-related HIV-1 transmission assay.
CBAs inhibiting 2G12 mAb binding to gp120 expressed on HIV-1 NL4.3 infected T cells.
| CBA | Binding Inhibition | IC50 (nM) | References |
|---|---|---|---|
| HHA a | Yes | 28–39 | [ |
| GNA a | Yes | 23–76 | [ |
| AH | Yes | 93 | [ |
| CV-N a | Yes | 16–28 | [ |
| MVN | Yes | 259 | [ |
| BanLec b | Yes | 4.5–14 | [ |
| GRFT b | Yes | 0.57 | [ |
| OAA | Yes | 21 | [ |
| UDA | Yes | 1000 | [ |
| NICTABA | No | >1000 | [ |
a: data also obtained against HIV-1 strains IIIB, MN and NDK. b: data from [59] and [61] were obtained against rgp120.