Literature DB >> 12015150

The domain-swapped dimer of cyanovirin-N is in a metastable folded state: reconciliation of X-ray and NMR structures.

Laura G Barrientos1, John M Louis, Istvan Botos, Toshiyuki Mori, Zhaozhong Han, Barry R O'Keefe, Michael R Boyd, Alexander Wlodawer, Angela M Gronenborn.   

Abstract

The structure of the potent HIV-inactivating protein cyanovirin-N was previously found by NMR to be a monomer in solution and a domain-swapped dimer by X-ray crystallography. Here we demonstrate that, in solution, CV-N can exist both in monomeric and in domain-swapped dimeric form. The dimer is a metastable, kinetically trapped structure at neutral pH and room temperature. Based on orientational NMR constraints, we show that the domain-swapped solution dimer is similar to structures in two different crystal forms, exhibiting solely a small reorientation around the hinge region. Mutation of the single proline residue in the hinge to glycine significantly stabilizes the protein in both its monomeric and dimeric forms. By contrast, mutation of the neighboring serine to proline results in an exclusively dimeric protein, caused by a drastic destabilization of the monomer.

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Year:  2002        PMID: 12015150     DOI: 10.1016/s0969-2126(02)00758-x

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  50 in total

1.  Open interface and large quaternary structure movements in 3D domain swapped proteins: insights from molecular dynamics simulations of the C-terminal swapped dimer of ribonuclease A.

Authors:  Antonello Merlino; Marc Antoine Ceruso; Luigi Vitagliano; Lelio Mazzarella
Journal:  Biophys J       Date:  2004-12-13       Impact factor: 4.033

2.  Specificity of cell-cell adhesion by classical cadherins: Critical role for low-affinity dimerization through beta-strand swapping.

Authors:  Chien Peter Chen; Shoshana Posy; Avinoam Ben-Shaul; Lawrence Shapiro; Barry H Honig
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-03       Impact factor: 11.205

3.  Quantitative analysis of the conservation of the tertiary structure of protein segments.

Authors:  Jishou Ruan; Ke Chen; Jack A Tuszynski; Lukasz A Kurgan
Journal:  Protein J       Date:  2006-07       Impact factor: 2.371

Review 4.  Protein reconstitution and three-dimensional domain swapping: benefits and constraints of covalency.

Authors:  Jannette Carey; Stina Lindman; Mikael Bauer; Sara Linse
Journal:  Protein Sci       Date:  2007-11       Impact factor: 6.725

5.  Stable and unstable cadherin dimers: mechanisms of formation and roles in cell adhesion.

Authors:  Regina B Troyanovsky; Oscar Laur; Sergey M Troyanovsky
Journal:  Mol Biol Cell       Date:  2007-08-29       Impact factor: 4.138

6.  Sequence and structural determinants of strand swapping in cadherin domains: do all cadherins bind through the same adhesive interface?

Authors:  Shoshana Posy; Lawrence Shapiro; Barry Honig
Journal:  J Mol Biol       Date:  2008-03-04       Impact factor: 5.469

7.  Designed oligomers of cyanovirin-N show enhanced HIV neutralization.

Authors:  Jennifer R Keeffe; Priyanthi N P Gnanapragasam; Sarah K Gillespie; John Yong; Pamela J Bjorkman; Stephen L Mayo
Journal:  Proc Natl Acad Sci U S A       Date:  2011-07-28       Impact factor: 11.205

8.  NMR solution structure of a cyanovirin homolog from wheat head blight fungus.

Authors:  Elena Matei; John M Louis; JunGoo Jee; Angela M Gronenborn
Journal:  Proteins       Date:  2011-03-01

9.  Dimeric states of neural- and epithelial-cadherins are distinguished by the rate of disassembly.

Authors:  Nagamani Vunnam; Jon Flint; Andrea Balbo; Peter Schuck; Susan Pedigo
Journal:  Biochemistry       Date:  2011-03-21       Impact factor: 3.162

10.  Multivalent interactions with gp120 are required for the anti-HIV activity of Cyanovirin.

Authors:  Yinan Liu; Jacob R Carroll; Lindsey A Holt; James McMahon; Barbara Giomarelli; Giovanna Ghirlanda
Journal:  Biopolymers       Date:  2009       Impact factor: 2.505

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