| Literature DB >> 25517029 |
Fangqin Wu1, Mei'an He2, Qiang Wen3, Wencai Zhang4, Jinhua Yang5, Xiaomin Zhang6, Tangchun Wu7, Longxian Cheng8.
Abstract
The IL-33/ST2 signaling pathway plays an important role in coronary artery disease (CHD); however, few studies have explored how variants in IL-33/ST2 genes influence CHD risk. Here, we examined the association between genetic variants in IL-33, ST2, and IL-1RAcP of the IL-33/ST2 axis and the risk of CHD. We conducted a case-controlled study with 1146 CHD cases and 1146 age- and sex-frequency-matched controls. Twenty-eight single nucleotide polymorphisms (SNPs) in IL-33, ST2, and IL-1RAcP were genotyped by Sequenom MassArray and TaqMan assay. Logistic regression was used to analyze these associations. The SNP rs4624606 in IL-1RAcP was nominally associated with CHD risk. The AA genotype was associated with a 1.85-fold increased risk of CHD (95% confidence interval (CI) = 1.01-3.36; p = 0.045) compared to the TT genotype. Further analysis showed that AA carriers also had a higher risk of CHD than TT + TA carriers (odds ratio (OR) = 1.85; 95% CI = 1.85-3.35; p = 0.043). However, no significant association was observed between variants in IL-33/ST2 genes and CHD risk. Further studies are needed to replicate our results in other ethnic groups with larger sample size.Entities:
Mesh:
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Year: 2014 PMID: 25517029 PMCID: PMC4284762 DOI: 10.3390/ijms151223227
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
General characteristics of the study population.
| Variables | Cases ( | Controls ( | |
|---|---|---|---|
| Sex, m/f (%) | 901/245 (78.6/21.4) | 891/255 (77.7/22.3) | 0.613 |
| Age, years | 60.5 ± 11.3 | 60.0 ± 10.3 | 0.23 |
| Blood pressure, mmHg | |||
| Systolic | 133.6 ± 29.0 | 136.0 ± 25.3 | 0.034 |
| Diastolic | 82.0 ± 11.3 | 82.9 ± 15.2 | 0.11 |
| Body mass index, kg/m2 | 23.7 ± 3.1 | 24.4 ± 3.3 | <0.01 |
| Fasting glucose, mmol/L | 5.6 ± 2.2 | 6.2 ± 3.0 | <0.01 |
| Total cholesterol, mmol/L | 4.35 ± 1.10 | 4.68 ± 0.92 | <0.01 |
| Triglyceride, mmol/L | 1.61 ± 1.30 | 1.67 ± 1.38 | 0.283 |
| Smoking, no/yes (%) | 686/460 (59.9/40.1) | 774/369 (67.7/32.3) | <0.01 |
| Alcohol drinking, no/yes (%) | 776/365 (68.0/32.0) | 822/317 (72.2/27.8) | <0.01 |
| Past history | |||
| Hypertension, no/yes | 784/361 (68.5/31.5) | 351/790 (30.8/69.2) | <0.01 |
| Diabetics, no/yes | 1080/65 (94.3/5.7) | 824/314 (72.4/27.6) | <0.01 |
| Family history of CHD, no/yes (%) | 1133/10 (99.1/0.9) | 947/158 (85.7/14.3) | <0.01 |
Variables are presented as the mean ± SD or percentage. p-Values were calculated; using independent-sample t-tests or Chi-square tests.
Genotype frequencies of 25 SNPs and their association with coronary heart disease (CHD) risk in the Chinese population.
| SNPs | Case a | Control a | Heterozygote b | Variant Homozygote b | Dominant Model c | Recessive Model d | ||||
|---|---|---|---|---|---|---|---|---|---|---|
| OR (95% CI) e |
| OR (95% CI) e |
| OR (95% CI) e |
| OR (95% CI) e |
| |||
| rs1929992 | 353/538/217 | 369/527/210 | 1.04 (0.82–1.32) | 0.733 | 1.11 (0.83–1.49) | 0.485 | 1.06 (0.85–1.32) | 0.594 | 1.08 (0.84–1.41) | 0.542 |
| rs10975520 | 327/554/246 | 335/539/234 | 1.00 (0.79–1.27) | 0.987 | 1.08 (0.81–1.44) | 0.618 | 1.02 (0.82–1.28) | 0.83 | 1.07 (0.84–1.38) | 0.570 |
| rs11792633 | 361/552/222 | 363/530/211 | 1.01 (0.80–1.28) | 0.912 | 1.09 (0.81–1.45) | 0.581 | 1.03 (0.83–1.29) | 0.762 | 1.08 (0.83–1.39) | 0.571 |
| rs1624159 | 1010/94/3 | 1020/91/6 | 0.88 (0.61–1.28) | 0.513 | 2.83 (0.58–13.9) | 0.199 | 0.93 (0.65–1.35) | 0.709 | 2.86 (0.58–14.04) | 0.195 |
| rs3755278 | 974/86/3 | 1045/89/4 | 1.02 (0.70–1.49) | 0.928 | 3.44 (0.53–22.19) | 0.193 | 1.06 (0.73–1.54) | 0.743 | 3.44 (0.53–22.16) | 0.194 |
| rs3821204 | 457/512/157 | 452/522/134 | 0.94 (0.76–1.18) | 0.612 | 1.26 (0.90–1.75) | 0.178 | 1.00 (0.81–1.24) | 0.972 | 1.30 (0.95–1.77) | 0.102 |
| rs13431828 | 925/194/15 | 932/166/10 | 1.16 (0.88–1.54) | 0.284 | 0.91 (0.35–2.38) | 0.843 | 1.15 (0.87–1.50) | 0.326 | 0.89 (0.34–2.32) | 0.805 |
| rs10206753 | 839/272/26 | 832/252/24 | 1.07 (0.84–1.37) | 0.562 | 0.97 (0.49–1.93) | 0.939 | 1.06 (0.84–1.34) | 0.598 | 0.96 (0.48–1.89) | 0.898 |
| rs1041973 | 845/248/41 | 844/234/30 | 1.00 (0.78–1.29) | 0.977 | 1.41 (0.79–2.49) | 0.243 | 1.05 (0.83–1.33) | 0.681 | 1.40 (0.80–2.48) | 0.242 |
| rs12999364 | 409/536/185 | 407/527/174 | 0.99 (0.79–1.24) | 0.908 | 1.13 (0.83–1.55) | 0.436 | 1.02 (0.82–1.26) | 0.854 | 1.14 (0.86–1.51) | 0.363 |
| rs6543116 | 337/571/216 | 326/537/245 | 1.02 (0.81–1.30) | 0.845 | 0.82 (0.61–1.10) | 0.189 | 0.96 (0.77–1.21) | 0.735 | 0.81 (0.62–1.04) | 0.101 |
| rs951774 | 660/413/58 | 630/408/70 | 0.91 (0.73–1.13) | 0.377 | 0.91 (0.57–1.45) | 0.683 | 0.91 (0.74–1.12) | 0.358 | 0.94 (0.60–1.49) | 0.8 |
| rs10515922 | 843/263/26 | 833/247/28 | 1.00 (0.78–1.27) | 0.976 | 1.13 (0.55–2.29) | 0.745 | 1.01 (0.79–1.28) | 0.955 | 1.13 (0.55–2.29) | 0.742 |
| rs13006559 | 1063/77/2 | 1046/59/3 | 1.24 (0.80–1.94) | 0.34 | 1.37 (0.12–15.25) | 0.798 | 1.25 (0.80–1.93) | 0.326 | 1.36 (0.12–15.10) | 0.804 |
| rs1015704 | 725/359/46 | 686/381/41 | 0.89 (0.71–1.11) | 0.295 | 1.02 (0.59–1.78) | 0.935 | 0.90 (0.73–1.12) | 0.34 | 1.07 (0.62–1.84) | 0.819 |
| rs9817203 | 515/493/122 | 506/489/113 | 1.05 (0.84–1.30) | 0.685 | 1.24 (0.87–1.77) | 0.228 | 1.08 (0.88–1.33) | 0.461 | 1.22 (0.87–1.70) | 0.255 |
| rs1559018 | 300/549/279 | 276/569/262 | 0.97 (0.76–1.25) | 0.825 | 1.14 (0.85–1.53) | 0.378 | 1.02 (0.81–1.30) | 0.846 | 1.16 (0.91–1.48) | 0.223 |
| rs3773986 | 861/245/19 | 844/250/14 | 1.01 (0.79–1.29) | 0.936 | 1.23 (0.52–2.91) | 0.644 | 1.02 (0.80–1.30) | 0.86 | 1.22 (0.52–2.90) | 0.647 |
| rs6765375 | 736/350/45 | 699/375/34 | 0.89 (0.71–1.11) | 0.301 | 1.18 (0.66–2.11) | 0.576 | 0.91 (0.74–1.13) | 0.408 | 1.23 (0.69–2.18) | 0.486 |
| rs4624606 | 734/338/46 | 731/351/26 | 0.99 (0.79–1.25) | 0.962 | 1.85 (1.01–3.36) | 0.045 | 1.05 (0.85–1.31) | 0.636 |
|
|
| rs16865597 | 877/204/12 | 854/223/17 | 1.02 (0.78–1.32) | 0.892 | 1.19 (0.45–3.12) | 0.728 | 1.03 (0.79–1.33) | 0.837 | 1.18 (0.45–3.11) | 0.733 |
| rs4687150 | 559/434/105 | 543/433/110 | 0.92 (0.74–1.15) | 0.459 | 0.90 (0.62–1.30) | 0.58 | 0.92 (0.74–1.13) | 0.412 | 0.94 (0.66–1.33) | 0.712 |
| rs3773958 | 380/548/200 | 368/534/206 | 0.97 (0.77–1.22) | 0.779 | 0.95 (0.70–1.28) | 0.729 | 0.96 (0.77–1.20) | 0.728 | 0.97 (0.74–1.26) | 0.806 |
| rs3773981 | 695/330/57 | 726/336/42 | 0.94 (0.75–1.18) | 0.59 | 1.09 (0.65–1.80) | 0.751 | 0.96 (0.77–1.19) | 0.692 | 1.11 (0.67–1.83) | 0.689 |
| rs6444435 | 638/340/65 | 691/363/51 | 0.97 (0.77–1.22) | 0.797 | 1.39 (0.87–2.23) | 0.168 | 1.02 (0.82–1.27) | 0.843 | 1.41 (0.88–2.24) | 0.150 |
a Wild-type homozygote/heterozygote/variant homozygote; b The reference group comprised subjects homozygous for the wild-type allele; c Dominant model (wild-type homozygote vs. heterozygote + variant homozygote); d Recessive model (wild-type homozygote + heterozygote vs. variant homozygote); e Data were calculated by unconditional logistic regression, adjusted for age, sex, smoking, drinking, BMI, TG, hypertension, DM, and family history of CHD. Numbers in bold mean the SNP rs4624606 was also associated with a significantly increased risk of CHD in a recessive model (AA vs. (TT + TA): OR = 1.85; 95% CI = 1.02–3.35; p = 0.043, Table 2).
Stratification analysis for the association between rs4624606 and the risk of CHD.
| rs4624606 OR (95% CI) a | |||||||
|---|---|---|---|---|---|---|---|
| Variables | TT | TA | AA |
| TT + TA | AA |
|
| Sex | |||||||
| Male | 1.00 | 0.95 (0.74–1.22) | 1.70 (0.89–3.23) | 0.515 | 1.00 | 1.72 (0.91–3.27) | 0.826 |
| Female | 1.00 | 1.24 (0.72–2.12) | 1.37 (0.22–8.69) | 1.00 | 1.26 (0.20–7.93) | ||
| Smoke status | |||||||
| Smokers | 1.00 | 0.98 (0.67–1.45) | 1.68 (0.58–4.88) | 0.820 | 1.00 | 1.69 (0.59–4.87) | 0.951 |
| Nonsmokers | 1.00 | 0.95 (0.72–1.26) | 1.82 (0.87–3.80) | 1.00 | 1.85 (0.89–3.84) | ||
| Drink | |||||||
| Drinkers | 1.00 | 0.92 (0.60–1.39) | 1.99 (0.61–6.43) | 0.974 | 1.00 | 1.74 (0.86–3.53) | 0.793 |
| Nondrinkers | 1.00 | 1.00 (0.76–1.30) | 1.74 (0.85–3.55) | 1.00 | 2.04 (0.64–6.56) | ||
| BMI, kg/m2 | |||||||
| < 25 | 1.00 | 1.08 (0.82–1.43) | 1.55 (0.70–3.47) | 0.204 | 1.00 | 1.52 (0.68–3.38) | 0.365 |
| ≥ 25 | 1.00 | 0.85 (0.58–1.24) | 2.24 (0.88–5.75) | 1.00 | 2.33 (0.92–5.91) | ||
| Hypertension | |||||||
| No | 1.00 | 1.22 (0.89–1.68) | 1.32 (0.57–3.05) | 0.491 | 1.00 | 1.24 (0.54–2.84) | 0.246 |
| Yes | 1.00 | 0.85 (0.62–1.17) |
| 1.00 |
| ||
| Diabetes | |||||||
| No | 1.00 | 1.02 (0.80–1.29) | 1.85 (0.99–3.44) | 0.626 | 1.00 | 1.84 (0.99–3.40) | 0.941 |
| Yes | 1.00 | 0.87 (0.42–1.79) | 1.72 (0.17–17.27) | 1.00 | 1.78 (0.18–17.72) | ||
a ORs were obtained from an unconditional logistic regression model with adjustment for age, sex, smoking, drinking, BMI, TG, hypertension, DM, and family history of CHD. For each stratified analysis, adjustments were made for all other variables excluding the stratified variable; b p-Values of interactions were calculated by unconditional logistic regression; c p < 0.05.
SNP locations and allele frequencies.
| SNP | Gene | Location | Genotype | MAF * | HWE | |||
|---|---|---|---|---|---|---|---|---|
| rs1929992 |
| Intron | A/G | 0.489 | 0.655 | |||
| rs10975520 |
| Intron | G/C | 0.488 | 1 | |||
| rs11792633 |
| Intron | T/C | 0.433 | – | |||
| rs1157505 |
| Intron | G/C | 0.225 | – | |||
| rs1624159 |
| Between genes | A/G | 0.06 | 0.02 | |||
| rs3755278 |
| intron | A/G | 0.067 | 1 | |||
| rs3821204 |
| 3'-Flanking region | C/G | 0.358 | 0.403 | |||
| rs13431828 |
| 5'-Flanking region | T/C | 0.089 | 1 | |||
| rs10206753 |
| Exon | C/T | 0.133 | 1 | |||
| rs1041973 |
| Exon | A/C | 0.156 | 0.527 | |||
| rs12999364 |
| Between genes | T/C | 0.45 | – | |||
| rs6543116 |
| Distal promoter | A/G | 0.367 | – | |||
| rs951774 |
| Distal promoter | A/C | 0.233 | 0.251 | |||
| rs10515922 |
| Distal promoter | C/T | 0.151 | 1 | |||
| rs13006559 |
| Distal promoter | T/C | 0.07 | 1 | |||
| -27307T/A |
| Distal promoter | T/A | – | – | |||
| -27614C/A |
| Distal promoter | C/A | – | – | |||
| rs1015704 |
| intron | G/A | 0.222 | 0.294 | |||
| rs9817203 |
| intron | T/C | 0.395 | 0.439 | |||
| rs1559018 |
| intron | G/A | 0.488 | 0.479 | |||
| rs3773986 |
| intron | T/C | 0.067 | 1 | |||
| rs6765375 |
| intron | C/A | 0.233 | 1 | |||
| rs4624606 |
| intron | A/T | 0.213 | 0.294 | |||
| rs16865597 |
| intron | C/T | 0.159 | 0.273 | |||
| rs4687150 |
| intron | T/C | 0.341 | 0.403 | |||
| rs3773958 |
| intron | G/T | 0.419 | 0.752 | |||
| rs3773981 |
| intron | C/A | 0.182 | 0.584 | |||
| rs6444435 |
| intron | A/G | 0.251 | 0.233 | |||
* Data from the NCBI; – Data were not found in http://www.ncbi.nlm.nih.gov/snp/.