Literature DB >> 18618452

Modeling approach to control of carbohydrate metabolism during citric acid accumulation by Aspergillus niger: I. Model definition and stability of the steady state.

N V Torres1.   

Abstract

A model of the carbohydrate metabolism and the anaplerotic synthesis of oxalacetate in Aspergillus niger, under conditions of citric and accumulation, is presented. In this first article we set the stage for subsequent analysis within the framework of the biochemical system theory (BST): we formulate the model and develop the system representation in power law forms, showing that the steady state is locally stable. In the second article, the control structure of the system is described and a rationale for the optimization of the process is developed.

Entities:  

Year:  1994        PMID: 18618452     DOI: 10.1002/bit.260440115

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  14 in total

Review 1.  Biological systems modeling and analysis: a biomolecular technique of the twenty-first century.

Authors:  Gautam Goel; I-Chun Chou; Eberhard O Voit
Journal:  J Biomol Tech       Date:  2006-09

2.  Quantifying robustness and dissipation cost of yeast cell cycle network: the funneled energy landscape perspectives.

Authors:  Bo Han; Jin Wang
Journal:  Biophys J       Date:  2007-03-09       Impact factor: 4.033

3.  Intrinsic noise, dissipation cost, and robustness of cellular networks: the underlying energy landscape of MAPK signal transduction.

Authors:  Saul Lapidus; Bo Han; Jin Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-17       Impact factor: 11.205

4.  Mitochondrial Citrate Transporters CtpA and YhmA Are Required for Extracellular Citric Acid Accumulation and Contribute to Cytosolic Acetyl Coenzyme A Generation in Aspergillus luchuensis mut. kawachii.

Authors:  Chihiro Kadooka; Kosuke Izumitsu; Masahira Onoue; Kayu Okutsu; Yumiko Yoshizaki; Kazunori Takamine; Masatoshi Goto; Hisanori Tamaki; Taiki Futagami
Journal:  Appl Environ Microbiol       Date:  2019-04-04       Impact factor: 4.792

5.  Transcriptomic analysis of temperature responses of Aspergillus kawachii during barley koji production.

Authors:  Taiki Futagami; Kazuki Mori; Shotaro Wada; Hiroko Ida; Yasuhiro Kajiwara; Hideharu Takashita; Kosuke Tashiro; Osamu Yamada; Toshiro Omori; Satoru Kuhara; Masatoshi Goto
Journal:  Appl Environ Microbiol       Date:  2015-02       Impact factor: 4.792

Review 6.  Recent developments in parameter estimation and structure identification of biochemical and genomic systems.

Authors:  I-Chun Chou; Eberhard O Voit
Journal:  Math Biosci       Date:  2009-03-25       Impact factor: 2.144

7.  LaeA Controls Citric Acid Production through Regulation of the Citrate Exporter-Encoding cexA Gene in Aspergillus luchuensis mut. kawachii.

Authors:  Chihiro Kadooka; Eri Nakamura; Kazuki Mori; Kayu Okutsu; Yumiko Yoshizaki; Kazunori Takamine; Masatoshi Goto; Hisanori Tamaki; Taiki Futagami
Journal:  Appl Environ Microbiol       Date:  2020-02-18       Impact factor: 4.792

8.  Funneled landscape leads to robustness of cell networks: yeast cell cycle.

Authors:  Jin Wang; Bo Huang; Xuefeng Xia; Zhirong Sun
Journal:  PLoS Comput Biol       Date:  2006-09-25       Impact factor: 4.475

9.  Inhibition of oxidative phosphorylation for enhancing citric acid production by Aspergillus niger.

Authors:  Lu Wang; Jianhua Zhang; Zhanglei Cao; Yajun Wang; Qiang Gao; Jian Zhang; Depei Wang
Journal:  Microb Cell Fact       Date:  2015-01-16       Impact factor: 5.328

10.  Metabolic model integration of the bibliome, genome, metabolome and reactome of Aspergillus niger.

Authors:  Mikael Rørdam Andersen; Michael Lynge Nielsen; Jens Nielsen
Journal:  Mol Syst Biol       Date:  2008-03-25       Impact factor: 11.429

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