Literature DB >> 24505651

The importance of being dispersed: A ranking of diffusion MRI models for fibre dispersion using in vivo human brain data.

Uran Ferizi1, Torben Schneider2, Maira Tariq3, Claudia A M Wheeler-Kingshott2, Hui Zhang3, Daniel C Alexander3.   

Abstract

In this work we compare parametric diffusion MRI models which explicitly seek to explain fibre dispersion in nervous tissue. These models aim at providing more specific biomarkers of disease by disentangling these structural contributions to the signal. Some models are drawn from recent work in the field; others have been constructed from combinations of existing compartments that aim to capture both intracellular and extracellular diffusion. To test these models we use a rich dataset acquired in vivo on the corpus callosum of a human brain, and then compare the models via the Bayesian Information Criteria. We test this ranking via bootstrapping on the data sets, and cross-validate across unseen parts of the protocol. We find that models that capture fibre dispersion are preferred. The results show the importance of modelling dispersion, even in apparently coherent fibres.

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Year:  2013        PMID: 24505651     DOI: 10.1007/978-3-642-40811-3_10

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  10 in total

1.  Histologically derived fiber response functions for diffusion MRI vary across white matter fibers-An ex vivo validation study in the squirrel monkey brain.

Authors:  Kurt G Schilling; Yurui Gao; Iwona Stepniewska; Vaibhav Janve; Bennett A Landman; Adam W Anderson
Journal:  NMR Biomed       Date:  2019-03-25       Impact factor: 4.044

2.  A robust diffusion tensor model for clinical applications of MRI to cartilage.

Authors:  Uran Ferizi; Amparo Ruiz; Ignacio Rossi; Jenny Bencardino; José G Raya
Journal:  Magn Reson Med       Date:  2017-05-28       Impact factor: 4.668

Review 3.  Connectome 2.0: Developing the next-generation ultra-high gradient strength human MRI scanner for bridging studies of the micro-, meso- and macro-connectome.

Authors:  Susie Y Huang; Thomas Witzel; Boris Keil; Alina Scholz; Mathias Davids; Peter Dietz; Elmar Rummert; Rebecca Ramb; John E Kirsch; Anastasia Yendiki; Qiuyun Fan; Qiyuan Tian; Gabriel Ramos-Llordén; Hong-Hsi Lee; Aapo Nummenmaa; Berkin Bilgic; Kawin Setsompop; Fuyixue Wang; Alexandru V Avram; Michal Komlosh; Dan Benjamini; Kulam Najmudeen Magdoom; Sudhir Pathak; Walter Schneider; Dmitry S Novikov; Els Fieremans; Slimane Tounekti; Choukri Mekkaoui; Jean Augustinack; Daniel Berger; Alexander Shapson-Coe; Jeff Lichtman; Peter J Basser; Lawrence L Wald; Bruce R Rosen
Journal:  Neuroimage       Date:  2021-08-28       Impact factor: 7.400

4.  The impact of gradient strength on in vivo diffusion MRI estimates of axon diameter.

Authors:  Susie Y Huang; Aapo Nummenmaa; Thomas Witzel; Tanguy Duval; Julien Cohen-Adad; Lawrence L Wald; Jennifer A McNab
Journal:  Neuroimage       Date:  2014-12-09       Impact factor: 6.556

5.  One diffusion acquisition and different white matter models: how does microstructure change in human early development based on WMTI and NODDI?

Authors:  Ileana O Jelescu; Jelle Veraart; Vitria Adisetiyo; Sarah S Milla; Dmitry S Novikov; Els Fieremans
Journal:  Neuroimage       Date:  2014-12-09       Impact factor: 6.556

6.  Characterizing brain tissue by assessment of the distribution of anisotropic microstructural environments in diffusion-compartment imaging (DIAMOND).

Authors:  Benoit Scherrer; Armin Schwartzman; Maxime Taquet; Mustafa Sahin; Sanjay P Prabhu; Simon K Warfield
Journal:  Magn Reson Med       Date:  2015-09-12       Impact factor: 4.668

7.  Comparison of 3D orientation distribution functions measured with confocal microscopy and diffusion MRI.

Authors:  Kurt Schilling; Vaibhav Janve; Yurui Gao; Iwona Stepniewska; Bennett A Landman; Adam W Anderson
Journal:  Neuroimage       Date:  2016-01-21       Impact factor: 6.556

8.  Diffusion MRI microstructure models with in vivo human brain Connectome data: results from a multi-group comparison.

Authors:  Uran Ferizi; Benoit Scherrer; Torben Schneider; Mohammad Alipoor; Odin Eufracio; Rutger H J Fick; Rachid Deriche; Markus Nilsson; Ana K Loya-Olivas; Mariano Rivera; Dirk H J Poot; Alonso Ramirez-Manzanares; Jose L Marroquin; Ariel Rokem; Christian Pötter; Robert F Dougherty; Ken Sakaie; Claudia Wheeler-Kingshott; Simon K Warfield; Thomas Witzel; Lawrence L Wald; José G Raya; Daniel C Alexander
Journal:  NMR Biomed       Date:  2017-06-23       Impact factor: 4.044

9.  Robust and fast nonlinear optimization of diffusion MRI microstructure models.

Authors:  R L Harms; F J Fritz; A Tobisch; R Goebel; A Roebroeck
Journal:  Neuroimage       Date:  2017-04-27       Impact factor: 6.556

10.  D-BRAIN: Anatomically Accurate Simulated Diffusion MRI Brain Data.

Authors:  Daniele Perrone; Ben Jeurissen; Jan Aelterman; Timo Roine; Jan Sijbers; Aleksandra Pizurica; Alexander Leemans; Wilfried Philips
Journal:  PLoS One       Date:  2016-03-01       Impact factor: 3.240

  10 in total

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