Literature DB >> 27571196

The Human Connectome Project's neuroimaging approach.

Matthew F Glasser1, Stephen M Smith2, Daniel S Marcus3, Jesper L R Andersson2, Edward J Auerbach4, Timothy E J Behrens2, Timothy S Coalson1, Michael P Harms5, Mark Jenkinson2, Steen Moeller4, Emma C Robinson6, Stamatios N Sotiropoulos2, Junqian Xu7, Essa Yacoub4, Kamil Ugurbil4, David C Van Essen1.   

Abstract

Noninvasive human neuroimaging has yielded many discoveries about the brain. Numerous methodological advances have also occurred, though inertia has slowed their adoption. This paper presents an integrated approach to data acquisition, analysis and sharing that builds upon recent advances, particularly from the Human Connectome Project (HCP). The 'HCP-style' paradigm has seven core tenets: (i) collect multimodal imaging data from many subjects; (ii) acquire data at high spatial and temporal resolution; (iii) preprocess data to minimize distortions, blurring and temporal artifacts; (iv) represent data using the natural geometry of cortical and subcortical structures; (v) accurately align corresponding brain areas across subjects and studies; (vi) analyze data using neurobiologically accurate brain parcellations; and (vii) share published data via user-friendly databases. We illustrate the HCP-style paradigm using existing HCP data sets and provide guidance for future research. Widespread adoption of this paradigm should accelerate progress in understanding the brain in health and disease.

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Year:  2016        PMID: 27571196      PMCID: PMC6172654          DOI: 10.1038/nn.4361

Source DB:  PubMed          Journal:  Nat Neurosci        ISSN: 1097-6256            Impact factor:   24.884


  109 in total

1.  Parcellations and hemispheric asymmetries of human cerebral cortex analyzed on surface-based atlases.

Authors:  David C Van Essen; Matthew F Glasser; Donna L Dierker; John Harwell; Timothy Coalson
Journal:  Cereb Cortex       Date:  2011-11-02       Impact factor: 5.357

2.  Correcting brain-wide correlation differences in resting-state FMRI.

Authors:  Ziad S Saad; Richard C Reynolds; Hang Joon Jo; Stephen J Gotts; Gang Chen; Alex Martin; Robert W Cox
Journal:  Brain Connect       Date:  2013-07-31

3.  Superficial white matter fiber systems impede detection of long-range cortical connections in diffusion MR tractography.

Authors:  Colin Reveley; Anil K Seth; Carlo Pierpaoli; Afonso C Silva; David Yu; Richard C Saunders; David A Leopold; Frank Q Ye
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-11       Impact factor: 11.205

4.  Comparing like with like: the power of knowing where you are.

Authors:  Robert Turner; Stefan Geyer
Journal:  Brain Connect       Date:  2014-08-07

5.  Function in the human connectome: task-fMRI and individual differences in behavior.

Authors:  Deanna M Barch; Gregory C Burgess; Michael P Harms; Steven E Petersen; Bradley L Schlaggar; Maurizio Corbetta; Matthew F Glasser; Sandra Curtiss; Sachin Dixit; Cindy Feldt; Dan Nolan; Edward Bryant; Tucker Hartley; Owen Footer; James M Bjork; Russ Poldrack; Steve Smith; Heidi Johansen-Berg; Abraham Z Snyder; David C Van Essen
Journal:  Neuroimage       Date:  2013-05-16       Impact factor: 6.556

6.  Task-free MRI predicts individual differences in brain activity during task performance.

Authors:  I Tavor; O Parker Jones; R B Mars; S M Smith; T E Behrens; S Jbabdi
Journal:  Science       Date:  2016-04-07       Impact factor: 47.728

Review 7.  Human connectomics.

Authors:  Timothy E J Behrens; Olaf Sporns
Journal:  Curr Opin Neurobiol       Date:  2011-09-09       Impact factor: 6.627

8.  Incorporating outlier detection and replacement into a non-parametric framework for movement and distortion correction of diffusion MR images.

Authors:  Jesper L R Andersson; Mark S Graham; Enikő Zsoldos; Stamatios N Sotiropoulos
Journal:  Neuroimage       Date:  2016-07-05       Impact factor: 6.556

9.  Correspondences between retinotopic areas and myelin maps in human visual cortex.

Authors:  Rouhollah O Abdollahi; Hauke Kolster; Matthew F Glasser; Emma C Robinson; Timothy S Coalson; Donna Dierker; Mark Jenkinson; David C Van Essen; Guy A Orban
Journal:  Neuroimage       Date:  2014-06-24       Impact factor: 6.556

10.  Parcellating cortical functional networks in individuals.

Authors:  Danhong Wang; Randy L Buckner; Michael D Fox; Daphne J Holt; Avram J Holmes; Sophia Stoecklein; Georg Langs; Ruiqi Pan; Tianyi Qian; Kuncheng Li; Justin T Baker; Steven M Stufflebeam; Kai Wang; Xiaomin Wang; Bo Hong; Hesheng Liu
Journal:  Nat Neurosci       Date:  2015-11-09       Impact factor: 24.884

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  255 in total

Review 1.  Recent theoretical, neural, and clinical advances in sustained attention research.

Authors:  Francesca C Fortenbaugh; Joseph DeGutis; Michael Esterman
Journal:  Ann N Y Acad Sci       Date:  2017-03-05       Impact factor: 5.691

2.  Brain imaging with improved acceleration and SNR at 7 Tesla obtained with 64-channel receive array.

Authors:  Kamil Uğurbil; Edward Auerbach; Steen Moeller; Andrea Grant; Xiaoping Wu; Pierre-Francois Van de Moortele; Cheryl Olman; Lance DelaBarre; Scott Schillak; Jerahmie Radder; Russell Lagore; Gregor Adriany
Journal:  Magn Reson Med       Date:  2019-02-25       Impact factor: 4.668

3.  Early childhood depression, emotion regulation, episodic memory, and hippocampal development.

Authors:  Deanna M Barch; Michael P Harms; Rebecca Tillman; Elizabeth Hawkey; Joan L Luby
Journal:  J Abnorm Psychol       Date:  2019-01

4.  Resting-State Functional Network Organization Is Stable Across Adolescent Development for Typical and Psychosis Spectrum Youth.

Authors:  Maria Jalbrzikowski; Fuchen Liu; William Foran; Kathryn Roeder; Bernie Devlin; Beatriz Luna
Journal:  Schizophr Bull       Date:  2020-02-26       Impact factor: 9.306

5.  Using temporal ICA to selectively remove global noise while preserving global signal in functional MRI data.

Authors:  Matthew F Glasser; Timothy S Coalson; Janine D Bijsterbosch; Samuel J Harrison; Michael P Harms; Alan Anticevic; David C Van Essen; Stephen M Smith
Journal:  Neuroimage       Date:  2018-08-02       Impact factor: 6.556

6.  Population-averaged atlas of the macroscale human structural connectome and its network topology.

Authors:  Fang-Cheng Yeh; Sandip Panesar; David Fernandes; Antonio Meola; Masanori Yoshino; Juan C Fernandez-Miranda; Jean M Vettel; Timothy Verstynen
Journal:  Neuroimage       Date:  2018-05-24       Impact factor: 6.556

7.  In vivo magnetic resonance imaging and spectroscopy. Technological advances and opportunities for applications continue to abound.

Authors:  Peter van Zijl; Linda Knutsson
Journal:  J Magn Reson       Date:  2019-07-09       Impact factor: 2.229

8.  The Child & Youth CompreHensIve Longitudinal Database for Deep Brain Stimulation (CHILD-DBS).

Authors:  Han Yan; Lauren Siegel; Sara Breitbart; Carolina Gorodetsky; Hernan D Gonorazky; Ivanna Yau; Cristina Go; Elizabeth Donner; Suneil K Kalia; Alfonso Fasano; Alexander G Weil; Aria Fallah; George M Ibrahim
Journal:  Childs Nerv Syst       Date:  2020-09-15       Impact factor: 1.475

9.  The Lifespan Human Connectome Project in Development: A large-scale study of brain connectivity development in 5-21 year olds.

Authors:  Leah H Somerville; Susan Y Bookheimer; Randy L Buckner; Gregory C Burgess; Sandra W Curtiss; Mirella Dapretto; Jennifer Stine Elam; Michael S Gaffrey; Michael P Harms; Cynthia Hodge; Sridhar Kandala; Erik K Kastman; Thomas E Nichols; Bradley L Schlaggar; Stephen M Smith; Kathleen M Thomas; Essa Yacoub; David C Van Essen; Deanna M Barch
Journal:  Neuroimage       Date:  2018-08-22       Impact factor: 6.556

10.  Testosterone and hippocampal trajectories mediate relationship of poverty to emotion dysregulation and depression.

Authors:  Deanna M Barch; Elizabeth A Shirtcliff; Nourhan M Elsayed; Diana Whalen; Kirsten Gilbert; Alecia C Vogel; Rebecca Tillman; Joan L Luby
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-24       Impact factor: 11.205

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