Literature DB >> 2548607

Persistence of the alpha-helix stop signal in the S-peptide in trifluoroethanol solutions.

J W Nelson1, N R Kallenbach.   

Abstract

alpha-Helix formation in the S-peptide (residues 1-19 of ribonuclease A) was studied in detail by use of two-dimensional 1H nuclear magnetic resonance to monitor the effects of 2,2,2-trifluoroethanol (TFE) at 0 degrees C and pH* 2.07. TFE stabilizes the S-peptide alpha-helix. Helix formation by a particular amino acid was monitored by the chemical shifts of the C alpha, C beta, and C gamma protons while increasing the concentration of TFE: large changes in chemical shift of a particular residue indicate that it is induced to go helical, whereas small chemical shift changes indicate little helix formation. Residues Thr-3 to Met-13 undergo chemical shift changes consistent with helix formation, whereas the other residues do not. Earlier work [Kim, P. S., & Baldwin, R. L. (1984) Nature 307, 329-334] reported that residues Thr-3 to His-12 become helical in aqueous solution. The existence of a "helix stop signal" was inferred from this behavior. We thus conclude that this helix stop signal persists in TFE solutions.

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Year:  1989        PMID: 2548607     DOI: 10.1021/bi00438a050

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  36 in total

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Journal:  Protein Sci       Date:  1999-08       Impact factor: 6.725

2.  The compact and expanded denatured conformations of apomyoglobin in the methanol-water solvent.

Authors:  Y O Kamatari; S Ohji; T Konno; Y Seki; K Soda; M Kataoka; K Akasaka
Journal:  Protein Sci       Date:  1999-04       Impact factor: 6.725

Review 3.  Nuclear magnetic resonance of membrane-associated peptides and proteins.

Authors:  S J Opella; C Ma; F M Marassi
Journal:  Methods Enzymol       Date:  2001       Impact factor: 1.600

4.  Structure and disorder in the ribonuclease S-peptide probed by NMR residual dipolar couplings.

Authors:  Andrei T Alexandrescu; Richard A Kammerer
Journal:  Protein Sci       Date:  2003-10       Impact factor: 6.725

5.  Environment affects amino acid preference for secondary structure.

Authors:  L Zhong; W C Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  1992-05-15       Impact factor: 11.205

6.  Enhanced metabolic stability and protein-binding properties of artificial alpha helices derived from a hydrogen-bond surrogate: application to Bcl-xL.

Authors:  Deyun Wang; Wei Liao; Paramjit S Arora
Journal:  Angew Chem Int Ed Engl       Date:  2005-10-14       Impact factor: 15.336

7.  Dynamical binding of hydrogen-bond surrogate derived Bak helices to antiapoptotic protein Bcl-xL.

Authors:  Ju Bao; Xiao Y Dong; John Z H Zhang; Paramjit S Arora
Journal:  J Phys Chem B       Date:  2009-03-19       Impact factor: 2.991

8.  Mutation of junctophilin type 2 associated with hypertrophic cardiomyopathy.

Authors:  Yoshihisa Matsushita; Toru Furukawa; Hiroshi Kasanuki; Makoto Nishibatake; Yachiyo Kurihara; Atsushi Ikeda; Naoyuki Kamatani; Hiroshi Takeshima; Rumiko Matsuoka
Journal:  J Hum Genet       Date:  2007-05-03       Impact factor: 3.172

9.  Membrane interaction of a beta-structure-forming synthetic peptide comprising the 116-139th sequence region of the cytotoxic protein alpha-sarcin.

Authors:  J M Mancheño; M Gasset; J P Albar; J Lacadena; A Martínez del Pozo; M Oñaderra; J G Gavilanes
Journal:  Biophys J       Date:  1995-06       Impact factor: 4.033

10.  Temperature coefficients of amide proton NMR resonance frequencies in trifluoroethanol: a monitor of intramolecular hydrogen bonds in helical peptides.

Authors:  S Rothemund; H Weisshoff; M Beyermann; E Krause; M Bienert; C Mügge; B D Sykes; F D Sönnichsen
Journal:  J Biomol NMR       Date:  1996-07       Impact factor: 2.835

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