Literature DB >> 25486061

Genetic targeting of chemical indicators in vivo.

Guoying Yang1, Fernanda de Castro Reis2, Mayya Sundukova2, Sofia Pimpinella2, Antonino Asaro2, Laura Castaldi2, Laura Batti2, Daniel Bilbao2, Luc Reymond3, Kai Johnsson3, Paul A Heppenstall1.   

Abstract

Fluorescent protein reporters have become the mainstay for tracing cellular circuitry in vivo but are limited in their versatility. Here we generated Cre-dependent reporter mice expressing the Snap-tag to target synthetic indicators to cells. Snap-tag labeling worked efficiently and selectively in vivo, allowing for both the manipulation of behavior and monitoring of cellular fluorescence from the same reporter.

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Year:  2014        PMID: 25486061     DOI: 10.1038/nmeth.3207

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  23 in total

1.  A general method for the covalent labeling of fusion proteins with small molecules in vivo.

Authors:  Antje Keppler; Susanne Gendreizig; Thomas Gronemeyer; Horst Pick; Horst Vogel; Kai Johnsson
Journal:  Nat Biotechnol       Date:  2002-12-09       Impact factor: 54.908

Review 2.  How to obtain labeled proteins and what to do with them.

Authors:  Marlon J Hinner; Kai Johnsson
Journal:  Curr Opin Biotechnol       Date:  2010-10-26       Impact factor: 9.740

3.  Scale: a chemical approach for fluorescence imaging and reconstruction of transparent mouse brain.

Authors:  Hiroshi Hama; Hiroshi Kurokawa; Hiroyuki Kawano; Ryoko Ando; Tomomi Shimogori; Hisayori Noda; Kiyoko Fukami; Asako Sakaue-Sawano; Atsushi Miyawaki
Journal:  Nat Neurosci       Date:  2011-08-30       Impact factor: 24.884

4.  A cre-transgenic mouse strain for the ubiquitous deletion of loxP-flanked gene segments including deletion in germ cells.

Authors:  F Schwenk; U Baron; K Rajewsky
Journal:  Nucleic Acids Res       Date:  1995-12-25       Impact factor: 16.971

5.  A Cre-inducible diphtheria toxin receptor mediates cell lineage ablation after toxin administration.

Authors:  Thorsten Buch; Frank L Heppner; Christine Tertilt; Tobias J A J Heinen; Marcel Kremer; F Thomas Wunderlich; Steffen Jung; Ari Waisman
Journal:  Nat Methods       Date:  2005-06       Impact factor: 28.547

6.  A robust and high-throughput Cre reporting and characterization system for the whole mouse brain.

Authors:  Linda Madisen; Theresa A Zwingman; Susan M Sunkin; Seung Wook Oh; Hatim A Zariwala; Hong Gu; Lydia L Ng; Richard D Palmiter; Michael J Hawrylycz; Allan R Jones; Ed S Lein; Hongkui Zeng
Journal:  Nat Neurosci       Date:  2009-12-20       Impact factor: 24.884

7.  A whole-mount immunocytochemical analysis of the expression of the intermediate filament protein vimentin in Xenopus.

Authors:  J A Dent; A G Polson; M W Klymkowsky
Journal:  Development       Date:  1989-01       Impact factor: 6.868

8.  Post-natal knockout of prion protein alters hippocampal CA1 properties, but does not result in neurodegeneration.

Authors:  G R Mallucci; S Ratté; E A Asante; J Linehan; I Gowland; J G R Jefferys; J Collinge
Journal:  EMBO J       Date:  2002-02-01       Impact factor: 11.598

9.  Ultrafast tissue staining with chemical tags.

Authors:  Johannes Kohl; Julian Ng; Sebastian Cachero; Ernesto Ciabatti; Michael-John Dolan; Ben Sutcliffe; Adam Tozer; Sabine Ruehle; Daniel Krueger; Shahar Frechter; Tiago Branco; Marco Tripodi; Gregory S X E Jefferis
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-25       Impact factor: 11.205

10.  Chemical clearing and dehydration of GFP expressing mouse brains.

Authors:  Klaus Becker; Nina Jährling; Saiedeh Saghafi; Reto Weiler; Hans-Ulrich Dodt
Journal:  PLoS One       Date:  2012-03-30       Impact factor: 3.240

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  20 in total

1.  Imaging and manipulating proteins in live cells through covalent labeling.

Authors:  Lin Xue; Iuliia A Karpenko; Julien Hiblot; Kai Johnsson
Journal:  Nat Chem Biol       Date:  2015-11-17       Impact factor: 15.040

Review 2.  Pros and Cons of Clinically Relevant Methods to Assess Pain in Rodents.

Authors:  Anke Tappe-Theodor; Tamara King; Michael M Morgan
Journal:  Neurosci Biobehav Rev       Date:  2019-03-15       Impact factor: 8.989

3.  A subpopulation of itch-sensing neurons marked by Ret and somatostatin expression.

Authors:  Kalina K Stantcheva; Loredana Iovino; Rahul Dhandapani; Concepcion Martinez; Laura Castaldi; Linda Nocchi; Emerald Perlas; Carla Portulano; Martina Pesaresi; Kalyanee S Shirlekar; Fernanda de Castro Reis; Triantafillos Paparountas; Daniel Bilbao; Paul A Heppenstall
Journal:  EMBO Rep       Date:  2016-02-29       Impact factor: 8.807

Review 4.  Dark dyes-bright complexes: fluorogenic protein labeling.

Authors:  Marcel P Bruchez
Journal:  Curr Opin Chem Biol       Date:  2015-06-06       Impact factor: 8.822

5.  ISDoT: in situ decellularization of tissues for high-resolution imaging and proteomic analysis of native extracellular matrix.

Authors:  Alejandro E Mayorca-Guiliani; Chris D Madsen; Thomas R Cox; Edward R Horton; Freja A Venning; Janine T Erler
Journal:  Nat Med       Date:  2017-06-12       Impact factor: 53.440

Review 6.  Next-generation interfaces for studying neural function.

Authors:  James A Frank; Marc-Joseph Antonini; Polina Anikeeva
Journal:  Nat Biotechnol       Date:  2019-08-12       Impact factor: 54.908

7.  Orthogonal Optical Control of a G Protein-Coupled Receptor with a SNAP-Tethered Photochromic Ligand.

Authors:  Johannes Broichhagen; Arunas Damijonaitis; Joshua Levitz; Kevin R Sokol; Philipp Leippe; David Konrad; Ehud Y Isacoff; Dirk Trauner
Journal:  ACS Cent Sci       Date:  2015-10-16       Impact factor: 14.553

8.  Synthetic Fluorophores for Visualizing Biomolecules in Living Systems.

Authors:  V I Martynov; A A Pakhomov; N V Popova; I E Deyev; A G Petrenko
Journal:  Acta Naturae       Date:  2016 Oct-Dec       Impact factor: 1.845

9.  Acetylated tubulin is essential for touch sensation in mice.

Authors:  Shane J Morley; Yanmei Qi; Loredana Iovino; Laura Andolfi; Da Guo; Nereo Kalebic; Laura Castaldi; Christian Tischer; Carla Portulano; Giulia Bolasco; Kalyanee Shirlekar; Claudia M Fusco; Antonino Asaro; Federica Fermani; Mayya Sundukova; Ulf Matti; Luc Reymond; Adele De Ninno; Luca Businaro; Kai Johnsson; Marco Lazzarino; Jonas Ries; Yannick Schwab; Jing Hu; Paul A Heppenstall
Journal:  Elife       Date:  2016-12-13       Impact factor: 8.140

10.  SNAP-tagged Chikungunya Virus Replicons Improve Visualisation of Non-Structural Protein 3 by Fluorescence Microscopy.

Authors:  Roland Remenyi; Grace C Roberts; Carsten Zothner; Andres Merits; Mark Harris
Journal:  Sci Rep       Date:  2017-07-18       Impact factor: 4.379

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