| Literature DB >> 25485142 |
Satoshi Katagiri1, Takaaki Hayashi2, Masakazu Akahori3, Takeshi Itabashi4, Jo Nishino5, Kazutoshi Yoshitake5, Masaaki Furuno6, Kazuho Ikeo5, Tetsuji Okada4, Hiroshi Tsuneoka2, Takeshi Iwata3.
Abstract
Purpose. To investigate genetic and clinical features of patients with rhodopsin (RHO) mutations in two Japanese families with autosomal dominant retinitis pigmentosa (adRP). Methods. Whole-exome sequence analysis was performed in ten adRP families. Identified RHO mutations for the cosegregation analysis were confirmed by Sanger sequencing. Ophthalmic examinations were performed to evaluate the RP phenotypes. The impact of the RHO mutation on the rhodopsin conformation was examined by molecular modeling analysis. Results. In two adRP families, we identified two RHO mutations (c.377G>T (p.W126L) and c.1036G>C (p.A346P)), one of which was novel. Complete cosegregation was confirmed for each mutation exhibiting the RP phenotype in both families. Molecular modeling predicted that the novel mutation (p.W126L) might impair rhodopsin function by affecting its conformational transition in the light-adapted form. Clinical phenotypes showed that patients with p.W126L exhibited sector RP, whereas patients with p.A346P exhibited classic RP. Conclusions. Our findings demonstrated that the novel mutation (p.W126L) may be associated with the phenotype of sector RP. Identification of RHO mutations is a very useful tool for predicting disease severity and providing precise genetic counseling.Entities:
Year: 2014 PMID: 25485142 PMCID: PMC4248368 DOI: 10.1155/2014/210947
Source DB: PubMed Journal: J Ophthalmol ISSN: 2090-004X Impact factor: 1.909
Figure 1Pedigrees of the two Japanese families with RP and amino acid sequence alignment of the rhodopsin in different vertebrate species. (a) and (b) The solid squares (male) and circles (female) represent the affected individuals. The proband of each family is indicated by the arrows. (c) The tryptophan residue at position 126 is highly conserved. The conserved amino acids between the different species are shown in the black boxes. The less and least conserved amino acids are highlighted in the gray or white boxes, respectively.
Figure 2Fundus photographs, optical coherence tomography (OCT) images, and visual fields with Goldmann kinetic perimetry (GP) for the two Japanese families with retinitis pigmentosa. (a) Fundus photograph, OCT, and GP in the right eye of patient II-2 in family 1. (b) Fundus photograph, OCT, and GP in the right eye of patient III-1 in family 1. (c) Fundus photograph, OCT, and GP in the right eye of patient II-1 in family 2. (d) Fundus photograph, OCT, and GP in the right eye of patient III-1 in family 2. (e) A fundus autofluorescence image in the right eye of patient III-1 in family 2. See the Results section for details.
Figure 3Full-field electroretinograms (ERGs). (a) and (b) ERG of both patient II-2 (a) and patient III-1 (b) in family 1 shows diminished amplitudes of the rod, standard combined, cone, and 30-Hz flicker responses. (c) ERG of patient II-1 in family 2 is nonrecordable for the rod, standard combined and 30-Hz flicker responses.
The rare variants found in the two Japanese families with RHO mutations, focusing on 212 retinal disease-causing genes registered in the RetNet database (https://sph.uth.edu/retnet/).
| JU0678-062JIKEI | Gene | Gene Bank ID | Exon | Nucleotide change | AA change | State | SNP ID | |
|---|---|---|---|---|---|---|---|---|
| Chrom | Position | |||||||
| 2 | 202498104 |
| NM_001044385 | 5 | c.325C>T | p.R109X | Hetero | |
| 3 | 129249734 |
| NM_000539 | 2 | c.377G>T | p.W126L | Hetero | |
| 4 | 6290790 |
| NM_006005 | 4 | c.392T>G | p.V131G | Hetero | |
| 4 | 6302786 |
| NM_006005 | 8 | c.1264G>T | p.A422S | Hetero | |
| 7 | 33427676 |
| NM_198428 | 19 | c.2035C>T | p.R679W | Hetero | |
| 8 | 10480476 |
| NM_178857 | 2 | c.236G>A | p.R79H | Hetero | |
| 14 | 21792816 |
| NM_020366 | 14 | c.1802C>T | p.S601L | Hetero | rs3748360 |
| 16 | 49670817 |
| NM_015069 | 4 | c.2243_2245del | p.748_749del | Hetero | |
|
| ||||||||
| JU0575-037JIKEI | Gene | Gene Bank ID | Exon | Nucleotide change | AA change | State | SNP ID | |
| Chrom | Position | |||||||
|
| ||||||||
| 1 | 94476477 |
| NM_000350 | 40 | c.5593C>T | p.H1865Y | Hetero | rs201707267 |
| 2 | 112751865 |
| NM_006343 | 9 | c.1334G>A | p.R445Q | Hetero | rs202242962 |
| 3 | 129252550 |
| NM_000539 | 5 | c.1036G>C | p.A346P | Hetero | |
| 11 | 17531103 |
| NM_153676 | 18 | c.1813A>C | p.I605L | Hetero | |
| 16 | 16291933 |
| NM_001171 | 10 | c.1283A>G | p.N428S | Hetero | rs201880691 |
Chrom = choromosome, AA = amino acid, Homo = homozygous, and Hetero = heterozygous.
Figure 4Projected view from the cytoplasmic side of the backbone before and after the 1 ns molecular dynamics (MD) simulations. The side chain of the position 126 in each model is shown by the bold sticks in the corresponding colors. (a) Dark-adapted like models. Blue: wild-type after 1 ns MD; green: wild-type before MD. (b) Dark-adapted like models. Red: W126L after 1 ns MD; green: W126L before MD. (c) Light-adapted like models. Blue: wild-type after 1 ns MD; green: wild-type before MD. (d) Light-adapted like models. Red: W126L after 1 ns MD; green: W126L before MD.
Clinical summary of Japanese patients with autosomal dominant retinitis pigmentosa with heterozygous RHO mutations.
| Patient, gender | Type of adRP | Age at examination | Mutation | BCVA | Electroretinograms (ERGs) | Reference | Notes | ||
|---|---|---|---|---|---|---|---|---|---|
| R | L | Flash (rod plus cone) ERG | Full-field ERG | ||||||
| Case 1, M | Classic | 44 | p.P347L | 0.5 | 0.66 | NR | NR in 30-Hz flicker | [ | Cataract |
| Case 2, F | Classic | 20 | p.P347L | 1.0 | 1.0 | NR | NR in 30-Hz flicker | [ | |
| Case 3, F | ND | 11 | p.P347L | 1.0 | 1.0 | Reduced | Reduced in 30-Hz flicker | [ | |
| Case 4, F | Classic | 75 | p.P347L | LP | LP | NR | NR in 30-Hz flicker | [ | Severe cataract |
| III-6, M | Sector | 49 | p.T17M | 0.2 | 0.2 | ND | Reduced in both rods and cones | [ | B-CME, L-CNV |
| Proband, F | Classic | 39 | p.E181K | 0.1 | 0.1 | ND | NR in rods, reduced in cones | [ | B-CME |
| III-5, F | Sector | 52 | p.N15S | ND | ND | ND | ND | [ | |
| II-2, M | Sector | 66 | p.G106R | 0.04 | 0.5 | ND | Reduced in both rods and cones | [ | R-CME |
| III-1, F | Sector | 44 | p.G106R | 1.2 | 1.2 | ND | Reduced in rods, normal in cones | [ | |
| III-2, F | Sector | 40 | p.G106R | 1.2 | 1.2 | ND | Reduced in rods, normal in cones | [ | |
| II-2 (FN.1), M | Sector | 58 | p.W126L | 1.5 | 0.7 | ND | Reduced in both rods and cones | Current study | |
| III-1 (FN.1), F | Sector | 31 | p.W126L | 1.5 | 1.2 | ND | Reduced in both rods and cones | Current study | |
| II-1 (FN.2), F | Classic | 35 | p.A346P | 0.7 | 0.6 | ND | NR in both rods and cones | Current study | |
| III-1 (FN.2), M | ND | 14 | p.A346P | 1.2 | 1.5 | Reduced | ND | Current study | |
BCVA = decimal best-corrected visual acuity; R = right eye; L = left eye; B = both eyes; M = male; F = female; FN = family number; ND = not described or not done; NR = nonrecordable; LP = light perception; CNV = choroidal neovascularization; and CME = cystoid macular edema.