Literature DB >> 2548203

Internal frameshifts within the mitochondrial genes for cytochrome oxidase subunit II and maxicircle unidentified reading frame 3 of Leishmania tarentolae are corrected by RNA editing: evidence for translation of the edited cytochrome oxidase subunit II mRNA.

J M Shaw1, D Campbell, L Simpson.   

Abstract

The Leishmania tarentolae cytochrome oxidase (EC 1.9.3.1) subunit II (COII) and maxicircle unidentified reading frame 3 (MURF3) mRNAs are edited internally by the addition of four and five uridine residues, respectively, which eliminate -1 and +1 reading frameshifts in the gene sequences. The editing events in COII are conserved in three kinetoplastid species, and those in MURF3 are conserved in two species. A primer extension assay showed that the ratio of edited to unedited RNA differed for each gene: 89% of the COII and 36% of the MURF3 transcripts are edited. Preliminary evidence was obtained for translation of the edited COII transcript into protein: antibodies generated against a synthetic peptide with the predicted carboxyl-terminal amino acid sequence reacted with a polypeptide of the correct molecular weight in immunoblots of a mitochondrial lysate.

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Year:  1989        PMID: 2548203      PMCID: PMC297809          DOI: 10.1073/pnas.86.16.6220

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

1.  Characterization of a protein fraction containing cytochromes b and c1 from mitochondria of Leishmania tarentolae.

Authors:  J M Shaw; L Simpson
Journal:  Exp Parasitol       Date:  1989-05       Impact factor: 2.011

2.  Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications.

Authors:  H Towbin; T Staehelin; J Gordon
Journal:  Proc Natl Acad Sci U S A       Date:  1979-09       Impact factor: 11.205

3.  Base composition-independent hybridization in tetramethylammonium chloride: a method for oligonucleotide screening of highly complex gene libraries.

Authors:  W I Wood; J Gitschier; L A Lasky; R M Lawn
Journal:  Proc Natl Acad Sci U S A       Date:  1985-03       Impact factor: 11.205

4.  Synchronization of Leishmania tarentolae by hydroxyurea.

Authors:  L Simpson; P Braly
Journal:  J Protozool       Date:  1970-11

5.  A difference between plasma and cellular fibronectins located with monoclonal antibodies.

Authors:  B T Atherton; R O Hynes
Journal:  Cell       Date:  1981-07       Impact factor: 41.582

6.  Isolation of maxicircle component of kinetoplast DNA from hemoflagellate protozoa.

Authors:  L Simpson
Journal:  Proc Natl Acad Sci U S A       Date:  1979-04       Impact factor: 11.205

7.  The sequence of the gene for cytochrome c oxidase subunit I, a frameshift containing gene for cytochrome c oxidase subunit II and seven unassigned reading frames in Trypanosoma brucei mitochondrial maxi-circle DNA.

Authors:  L A Hensgens; J Brakenhoff; B F De Vries; P Sloof; M C Tromp; J H Van Boom; R Benne
Journal:  Nucleic Acids Res       Date:  1984-10-11       Impact factor: 16.971

8.  High-resolution electrophoretic fractionation and partial characterization of the mitochondrial translation products from HeLa cells.

Authors:  E Ching; G Attardi
Journal:  Biochemistry       Date:  1982-06-22       Impact factor: 3.162

9.  Kinetoplast RNA of Leishmania tarentolae.

Authors:  L Simpson; A G Simpson
Journal:  Cell       Date:  1978-05       Impact factor: 41.582

10.  Sequences of six genes and several open reading frames in the kinetoplast maxicircle DNA of Leishmania tarentolae.

Authors:  V F de la Cruz; N Neckelmann; L Simpson
Journal:  J Biol Chem       Date:  1984-12-25       Impact factor: 5.157

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  12 in total

Review 1.  High throughput sequencing revolution reveals conserved fundamentals of U-indel editing.

Authors:  Sara L Zimmer; Rachel M Simpson; Laurie K Read
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-06-11       Impact factor: 9.957

2.  Guide RNA-directed uridine insertion RNA editing in vitro.

Authors:  E M Byrne; G J Connell; L Simpson
Journal:  EMBO J       Date:  1996-12-02       Impact factor: 11.598

3.  Translation of open reading frame in kinetoplast DNA minicircles of clinical isolates of L. donovani.

Authors:  Hema Kothari; Pranav Kumar; Rohit Saluja; Shyam Sundar; Neeloo Singh
Journal:  Parasitol Res       Date:  2006-10-18       Impact factor: 2.289

4.  Complete set of mitochondrial pan-edited mRNAs in Leishmania mexicana amazonensis LV78.

Authors:  Dmitri A Maslov
Journal:  Mol Biochem Parasitol       Date:  2010-06-01       Impact factor: 1.759

5.  RNA editing in mitochondria of cultured trypanosomatids: translatable mRNAs for NADH-dehydrogenase subunits are missing.

Authors:  P Sloof; G J Arts; J van den Burg; H van der Spek; R Benne
Journal:  J Bioenerg Biomembr       Date:  1994-04       Impact factor: 2.945

6.  The NADH dehydrogenase subunit 7 gene is interrupted by four group II introns in the wheat mitochondrial genome.

Authors:  L Bonen; K Williams; S Bird; C Wood
Journal:  Mol Gen Genet       Date:  1994-07-08

7.  Computer methods for locating kinetoplastid cryptogenes.

Authors:  A von Haeseler; B Blum; L Simpson; N Sturm; M S Waterman
Journal:  Nucleic Acids Res       Date:  1992-06-11       Impact factor: 16.971

8.  Implications of novel guide RNA features for the mechanism of RNA editing in Crithidia fasciculata.

Authors:  G J Arts; H van der Spek; D Speijer; J van den Burg; H van Steeg; P Sloof; R Benne
Journal:  EMBO J       Date:  1993-04       Impact factor: 11.598

9.  Novel features of a PIWI-like protein homolog in the parasitic protozoan Leishmania.

Authors:  Prasad K Padmanabhan; Carole Dumas; Mukesh Samant; Annie Rochette; Martin J Simard; Barbara Papadopoulou
Journal:  PLoS One       Date:  2012-12-21       Impact factor: 3.240

10.  Trypanosoma cruzi mitochondrial maxicircles display species- and strain-specific variation and a conserved element in the non-coding region.

Authors:  Scott J Westenberger; Gustavo C Cerqueira; Najib M El-Sayed; Bianca Zingales; David A Campbell; Nancy R Sturm
Journal:  BMC Genomics       Date:  2006-03-22       Impact factor: 3.969

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