Literature DB >> 25472629

Null model approaches to evaluating the relative role of different assembly processes in shaping ecological communities.

Akira S Mori1, Saori Fujii, Ryo Kitagawa, Dai Koide.   

Abstract

Various local processes simultaneously shape ecological assemblages. β-diversity is a useful metric for inferring the underlying mechanisms of community assembly. However, β-diversity is not independent of γ-diversity, which may mask the local mechanisms that govern community processes across regions. Recent approaches that rely on an abundance-based null model could solve this sampling issue. However, if abundance varies widely across a region, the relative roles of deterministic and stochastic processes may be substantially misestimated. Furthermore, there is additional uncertainty as to whether null models used to correct γ-dependence in β-diversity should be independent of the observed patterns of species abundance distributions or whether the models should reflect these patterns. Here, we aim to test what null models with various constraints imply about the underlying processes shaping β-diversity. First, we found that an abundance-driven sampling effect could substantially influence the calculation of γ-corrected β-diversity. Second, we found that the null models that preserve the species abundance patterns could better reflect empirical patterns of spatial organization of individuals. The different implications generated from different applications of the null model approach therefore suggest that there are still frontiers regarding how local processes that shape species assemblages should be quantified. Carefully exploring each facet within different assembly processes is important.

Mesh:

Year:  2014        PMID: 25472629     DOI: 10.1007/s00442-014-3170-9

Source DB:  PubMed          Journal:  Oecologia        ISSN: 0029-8549            Impact factor:   3.225


  35 in total

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Authors:  David Tilman
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-08       Impact factor: 11.205

2.  Global correlations in tropical tree species richness and abundance reject neutrality.

Authors:  Robert E Ricklefs; Susanne S Renner
Journal:  Science       Date:  2012-01-27       Impact factor: 47.728

3.  Disentangling the drivers of β diversity along latitudinal and elevational gradients.

Authors:  Nathan J B Kraft; Liza S Comita; Jonathan M Chase; Nathan J Sanders; Nathan G Swenson; Thomas O Crist; James C Stegen; Mark Vellend; Brad Boyle; Marti J Anderson; Howard V Cornell; Kendi F Davies; Amy L Freestone; Brian D Inouye; Susan P Harrison; Jonathan A Myers
Journal:  Science       Date:  2011-09-23       Impact factor: 47.728

4.  Null model analysis of species associations using abundance data.

Authors:  Werner Ulrich; Nicholas J Gotelli
Journal:  Ecology       Date:  2010-11       Impact factor: 5.499

5.  Loss of functional diversity under land use intensification across multiple taxa.

Authors:  Dan F B Flynn; Melanie Gogol-Prokurat; Theresa Nogeire; Nicole Molinari; Bárbara Trautman Richers; Brenda B Lin; Nicholas Simpson; Margaret M Mayfield; Fabrice DeClerck
Journal:  Ecol Lett       Date:  2009-01       Impact factor: 9.492

6.  Comparing classical community models: theoretical consequences for patterns of diversity.

Authors:  Jérôme Chave; Helene C Muller-Landau; Simon A Levin
Journal:  Am Nat       Date:  2002-01       Impact factor: 3.926

7.  Bee diversity effects on pollination depend on functional complementarity and niche shifts.

Authors:  Jochen Fründ; Carsten F Dormann; Andrea Holzschuh; Teja Tscharntke
Journal:  Ecology       Date:  2013-09       Impact factor: 5.499

8.  A latitudinal diversity gradient in planktonic marine bacteria.

Authors:  Jed A Fuhrman; Joshua A Steele; Ian Hewson; Michael S Schwalbach; Mark V Brown; Jessica L Green; James H Brown
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-28       Impact factor: 11.205

9.  Coexistence through spatio-temporal heterogeneity and species sorting in grassland plant communities.

Authors:  Erin J Questad; Bryan L Foster
Journal:  Ecol Lett       Date:  2008-04-25       Impact factor: 9.492

10.  Turnover of soil bacterial diversity driven by wide-scale environmental heterogeneity.

Authors:  L Ranjard; S Dequiedt; N Chemidlin Prévost-Bouré; J Thioulouse; N P A Saby; M Lelievre; P A Maron; F E R Morin; A Bispo; C Jolivet; D Arrouays; P Lemanceau
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

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  7 in total

1.  Phycosphere Microbial Succession Patterns and Assembly Mechanisms in a Marine Dinoflagellate Bloom.

Authors:  Jin Zhou; Guo-Fu Chen; Ke-Zhen Ying; Hui Jin; Jun-Ting Song; Zhong-Hua Cai
Journal:  Appl Environ Microbiol       Date:  2019-07-18       Impact factor: 4.792

Review 2.  Stochastic Community Assembly: Does It Matter in Microbial Ecology?

Authors:  Jizhong Zhou; Daliang Ning
Journal:  Microbiol Mol Biol Rev       Date:  2017-10-11       Impact factor: 11.056

3.  Similar fish species composition despite larger environmental heterogeneity during severe hypoxia in a coastal ecosystem.

Authors:  Naoto Shinohara; Yuki Hongo; Momoko Ichinokawa; Shota Nishijima; Shuhei Sawayama; Hiroaki Kurogi; Yasuyuki Uto; Hisanori Mita; Mitsuhiro Ishii; Akane Kusano; Seiji Akimoto
Journal:  Ecol Evol       Date:  2022-05-15       Impact factor: 3.167

Review 4.  β-Diversity, Community Assembly, and Ecosystem Functioning.

Authors:  Akira S Mori; Forest Isbell; Rupert Seidl
Journal:  Trends Ecol Evol       Date:  2018-05-26       Impact factor: 20.589

5.  Spatial scale changes the relationship between beta diversity, species richness and latitude.

Authors:  Rachakonda Sreekar; Masatoshi Katabuchi; Akihiro Nakamura; Richard T Corlett; J W Ferry Slik; Christine Fletcher; Fangliang He; George D Weiblen; Guochun Shen; Han Xu; I-Fang Sun; Ke Cao; Keping Ma; Li-Wan Chang; Min Cao; Mingxi Jiang; I A U Nimal Gunatilleke; Perry Ong; Sandra Yap; C V Savitri Gunatilleke; Vojtech Novotny; Warren Y Brockelman; Wusheng Xiang; Xiangcheng Mi; Xiankun Li; Xihua Wang; Xiujuan Qiao; Yide Li; Sylvester Tan; Richard Condit; Rhett D Harrison; Lian Pin Koh
Journal:  R Soc Open Sci       Date:  2018-09-19       Impact factor: 2.963

6.  From forest to fragment: compositional differences inside coastal forest moth assemblages and their environmental correlates.

Authors:  Britta Uhl; Mirko Wölfling; Konrad Fiedler
Journal:  Oecologia       Date:  2021-02-01       Impact factor: 3.225

7.  Soil Fungal Community Composition, Not Assembly Process, Was Altered by Nitrogen Addition and Precipitation Changes at an Alpine Steppe.

Authors:  Yuanming Xiao; Changbin Li; Yang Yang; Yunfeng Peng; Yuanhe Yang; Guoying Zhou
Journal:  Front Microbiol       Date:  2020-10-16       Impact factor: 5.640

  7 in total

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