| Literature DB >> 25471797 |
Antonella Amore1, Annabel Serpico1, Angela Amoresano1, Roberto Vinciguerra1, Vincenza Faraco1.
Abstract
In this study, the recombinant α-L-arabinofuranosidase from the fungus Pleurotus ostreatus (rPoAbf) was subjected to site-directed mutagenesis with the aim of elucidating the role of glycosylation on the properties of the enzyme at the level of S160 residue. As a matter of fact, previous mass spectral analyses had led to the localization of a single O-glycosylation at this site. Recombinant expression and characterization of the rPoAbf mutant S160G was therefore performed. It was shown that the catalytic properties are slightly changed by the mutation, with a more evident modification of the Kcat and KM toward the synthetic substrate pN-glucopyranoside. More importantly, the mutation negatively affected the stability of the enzyme at various pHs and temperatures. Circular dichroism (CD) analyses showed a minimum at 210 nm for wild-type (wt) rPoAbf, typical of the beta-sheets structure, whereas this minimum is shifted for rPoAbf S160G, suggesting the presence of an unfolded structure. A similar behavior was revealed when wt rPoAbf was enzymatically deglycosylated. CD structural analyses of both the site-directed mutant and the enzymatically deglycosylated wild-type enzyme indicate a role of the glycosylation at the S160 residue in rPoAbf secondary structure stability.Entities:
Keywords: arabinofuranosidase; fungus; glycosylation; lignocelluloses; site-directed mutagenesis
Mesh:
Substances:
Year: 2015 PMID: 25471797 PMCID: PMC5032992 DOI: 10.1002/bab.1325
Source DB: PubMed Journal: Biotechnol Appl Biochem ISSN: 0885-4513 Impact factor: 2.431
Figure 1Time course of arabinofuranosidase activity's production by rPoAbf and rPoAbf S160G at 20 °C.
Figure 2Effect of pH (a) and temperature (b) on the activity of rPoAbf and rPoAbf S160G toward pNPA as a substrate. The percentage of activity reported in (a) and (b) was calculated as ratio to the maximum activity measured at optimal pH of 5 and temperature of 40 °C.
Figure 3pH resistance of rPoAbf and rPoAbf S160G.
Figure 4Thermoresistance of rPoAbf and rPoAbf S160G.
Arabinose liberation from natural substrates and arabinooligosaccharides
| Substrate | Amount of released sugar (μg/mL) wild type | Amount of released sugar (μg/mL) S160G |
|---|---|---|
| Larch arabinogalactan | 9.09 ± 0.56 | 6.84 ± 1.33 |
| CM‐linear arabinan | 249.25 ± 7.64 | 250.32 ± 4.61 |
| Arabinotriose | 112.26 ± 3.35 | 97.87 ± 2.47 |
| Arabinohexaose | 105.00 ± 7.77 | 102.02 ± 4.75 |
Equivalents of galactose were measured as described in the section Material and Methods.
LC‐MS/MS analysis of the rPoAbf digested with trypsin
| Peptide |
| MH+ | Sequence |
|---|---|---|---|
| 104–110 | 374.2115 | 2 | FTVPAGR |
| 126–133 | 434.7426 | 2 | IVASSTYK |
| 526–533 | 465.2406 | 2 | SASYFVQK |
| 562–571 | 530.3070 | 2 | NTATGEIIIK |
| 383–391 | 537.2984 | 2 | WPAFVNALR |
| 552–561 | 548.2838 | 2 | TGTAFWGVTR |
| 231–243 | 701.8669 | 2 | DDIATALAEMKPK |
| 231–244 +OxidizedMet | 709.8633 | 2 | DDIATALAEMKPK |
| 111–125 | 774.3698 | 2 | TGQVGFANSGFFGMK |
| 111–126 +OxidizedMet | 782.3710 | 2 | TGQVGFANSGFFGMK |
| 247–261 | 793.9026 | 2 | FPGGNNLEGQTVPTR |
| 171–186 | 859.4476 | 2 | GASTSWQQISVSLTPR |
| 534–551 | 1,013.9991 | 2 | LFSTNMGNEYIPSTLPSR |
| 534–552 +OxidizedMet | 1,021.9996 | 2 | LFSTNMGNEYIPSTLPSR |
| 224–261 | 679.6828 | 3 | FFRFPGGNNLEGQTVPTR |
| 469–489 | 761.0116 | 3 | LTFSTMQSASGEAAYMIGMER |
Figure 5Doubly charged ion 758.92 m/z spectrum (a) and its relative MS/MS spectrum (b).
Figure 6(a) CD spectra of wt rPoAbf and the mutant rPoAbf S160G and (b) CD spectra of enzymatically O‐deglycosilated wt rPoAbf and rPoAbf.
MALDI–MS analysis of the rPoAbf digested with trypsin after deglycosylation with O‐glycosidase enzymes
|
| Peptide | Sequence |
|---|---|---|
| 747.25 | F[104–110]R | FTVPAGR |
| 1,073.36 | W[383–391] | WPAFVNALR |
| 1,546.51 (unmodified) | T[156–170]R | TTSGSTIVSQTVPIR |
| 1,586.45 | F[247–261]R | FPGGNNLEGQTVPTR |
| 2,026.57 | L[534–551]R | LFSTNMGNEYIPSTLPSR |
| 2,043.52 + Oxidized Met | L[534–551]R | LFSTNMGNEYIPSTLPSR |
| 2,280.58 | L[469–489]R | LTFSTMQSASGEAAYMIGMER |
| 2,396.81 | T[111–133]K | TGQVGFANSGFFGMKIVASSTYK |
| 2,962.70 | N[441–468]R | NGVTFFEGEYAAISTNPNDIFGSPANGR |
| 3,246.00 | T[156–186]R | TTSGSTIVSQTVPIRGASTSWQQISVSLTPR |
Figure 7MALDI–MS spectrum obtained from the analysis of the tryptic peptide mixture of deglycosylated rPoAbf.