Literature DB >> 25461335

Sequential Monte Carlo tracking of the marginal artery by multiple cue fusion and random forest regression.

Kevin M Cherry1, Brandon Peplinski1, Lauren Kim1, Shijun Wang1, Le Lu1, Weidong Zhang1, Jianfei Liu1, Zhuoshi Wei1, Ronald M Summers2.   

Abstract

Given the potential importance of marginal artery localization in automated registration in computed tomography colonography (CTC), we have devised a semi-automated method of marginal vessel detection employing sequential Monte Carlo tracking (also known as particle filtering tracking) by multiple cue fusion based on intensity, vesselness, organ detection, and minimum spanning tree information for poorly enhanced vessel segments. We then employed a random forest algorithm for intelligent cue fusion and decision making which achieved high sensitivity and robustness. After applying a vessel pruning procedure to the tracking results, we achieved statistically significantly improved precision compared to a baseline Hessian detection method (2.7% versus 75.2%, p<0.001). This method also showed statistically significantly improved recall rate compared to a 2-cue baseline method using fewer vessel cues (30.7% versus 67.7%, p<0.001). These results demonstrate that marginal artery localization on CTC is feasible by combining a discriminative classifier (i.e., random forest) with a sequential Monte Carlo tracking mechanism. In so doing, we present the effective application of an anatomical probability map to vessel pruning as well as a supplementary spatial coordinate system for colonic segmentation and registration when this task has been confounded by colon lumen collapse. Published by Elsevier B.V.

Entities:  

Keywords:  CT angiography; Marginal artery; Multiple cue fusion; Random forest; Sequential Monte Carlo tracking

Mesh:

Year:  2014        PMID: 25461335      PMCID: PMC4314370          DOI: 10.1016/j.media.2014.09.006

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  28 in total

1.  Particle filters, a quasi-Monte-Carlo-solution for segmentation of coronaries.

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Review 3.  A review of 3D vessel lumen segmentation techniques: models, features and extraction schemes.

Authors:  David Lesage; Elsa D Angelini; Isabelle Bloch; Gareth Funka-Lea
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4.  Computed tomographic virtual colonoscopy computer-aided polyp detection in a screening population.

Authors:  Ronald M Summers; Jianhua Yao; Perry J Pickhardt; Marek Franaszek; Ingmar Bitter; Daniel Brickman; Vamsi Krishna; J Richard Choi
Journal:  Gastroenterology       Date:  2005-12       Impact factor: 22.682

5.  Simple Neurite Tracer: open source software for reconstruction, visualization and analysis of neuronal processes.

Authors:  Mark H Longair; Dean A Baker; J Douglas Armstrong
Journal:  Bioinformatics       Date:  2011-07-04       Impact factor: 6.937

6.  The angiographic anatomy of the small arteries and their collaterals in colorectal resections: some insights into anastomotic perfusion.

Authors:  Andrew S Allison; Christine Bloor; William Faux; Ponnandi Arumugam; Adam Widdison; Edward Lloyd-Davies; Giles Maskell
Journal:  Ann Surg       Date:  2010-06       Impact factor: 12.969

7.  Incremental benefit of computer-aided detection when used as a second and concurrent reader of CT colonographic data: multiobserver study.

Authors:  Steve Halligan; Susan Mallett; Douglas G Altman; Justine McQuillan; Maria Proud; Gareth Beddoe; Lesley Honeyfield; Stuart A Taylor
Journal:  Radiology       Date:  2010-11-17       Impact factor: 11.105

8.  Effect of computer-aided detection for CT colonography in a multireader, multicase trial.

Authors:  Abraham H Dachman; Nancy A Obuchowski; Jeffrey W Hoffmeister; J Louis Hinshaw; Michael I Frew; Thomas C Winter; Robert L Van Uitert; Senthil Periaswamy; Ronald M Summers; Bruce J Hillman
Journal:  Radiology       Date:  2010-07-27       Impact factor: 11.105

9.  Accuracy of CT colonography for detection of large adenomas and cancers.

Authors:  C Daniel Johnson; Mei-Hsiu Chen; Alicia Y Toledano; Jay P Heiken; Abraham Dachman; Mark D Kuo; Christine O Menias; Betina Siewert; Jugesh I Cheema; Richard G Obregon; Jeff L Fidler; Peter Zimmerman; Karen M Horton; Kevin Coakley; Revathy B Iyer; Amy K Hara; Robert A Halvorsen; Giovanna Casola; Judy Yee; Benjamin A Herman; Lawrence J Burgart; Paul J Limburg
Journal:  N Engl J Med       Date:  2008-09-18       Impact factor: 91.245

10.  Tracking the motion trajectories of junction structures in 4D CT images of the lung.

Authors:  Guanglei Xiong; Chuangzhen Chen; Jianzhou Chen; Yaoqin Xie; Lei Xing
Journal:  Phys Med Biol       Date:  2012-07-13       Impact factor: 3.609

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  2 in total

Review 1.  Progress in Fully Automated Abdominal CT Interpretation.

Authors:  Ronald M Summers
Journal:  AJR Am J Roentgenol       Date:  2016-04-21       Impact factor: 3.959

2.  Abdominal artery segmentation method from CT volumes using fully convolutional neural network.

Authors:  Masahiro Oda; Holger R Roth; Takayuki Kitasaka; Kazunari Misawa; Michitaka Fujiwara; Kensaku Mori
Journal:  Int J Comput Assist Radiol Surg       Date:  2019-09-06       Impact factor: 2.924

  2 in total

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