Literature DB >> 25457613

Rescuing dicer defects via inhibition of an anti-dicing nuclease.

Ken Asada, Emanuele Canestrari, Xiuping Fu, Zhi Li, Edward Makowski, Yen-Ching Wu, Jeffrey K Mito, David G Kirsch, Jay Baraban, Zain Paroo.   

Abstract

Genetic defects in the microRNA (miRNA) generating enzyme, dicer, are increasingly linked to disease. Loss of miRNA in dicer deficiency is thought to be due to loss of miRNA-generating activity. Here, we demonstrate a catabolic mechanism driving miRNA depletion in dicer deficiency. We developed a Dicer-antagonist assay revealing a pre-miRNA degrading enzyme that competes with pre-miRNA processing. We purified this pre-miRNA degrading activity using an unbiased chromatographic procedure and identified the ribonuclease complex Translin/Trax (TN/TX). In wild-type dicer backgrounds, pre-miRNA processing was dominant. However, in dicer-deficient contexts, TN/TX broadly suppressed miRNA. These findings indicate that miRNA depletion in dicer deficiency is due to the combined loss of miRNA-generating activity and catabolic function of TN/TX. Importantly, inhibition of TN/TX mitigated loss of both miRNA and tumor suppression with dicer haploinsufficiency. These studies reveal a potentially druggable target for restoring miRNA function in cancers and emerging dicer deficiencies.

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Year:  2014        PMID: 25457613      PMCID: PMC4303555          DOI: 10.1016/j.celrep.2014.10.021

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  66 in total

1.  Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs.

Authors:  Rui Yi; Yi Qin; Ian G Macara; Bryan R Cullen
Journal:  Genes Dev       Date:  2003-12-17       Impact factor: 11.361

2.  The microRNA Registry.

Authors:  Sam Griffiths-Jones
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

3.  Recurrent somatic DICER1 mutations in nonepithelial ovarian cancers.

Authors:  Alireza Heravi-Moussavi; Michael S Anglesio; S-W Grace Cheng; Janine Senz; Winnie Yang; Leah Prentice; Anthony P Fejes; Christine Chow; Alicia Tone; Steve E Kalloger; Nancy Hamel; Andrew Roth; Gavin Ha; Adrian N C Wan; Sarah Maines-Bandiera; Clara Salamanca; Barbara Pasini; Blaise A Clarke; Anna F Lee; Cheng-Han Lee; Chengquan Zhao; Robert H Young; Samuel A Aparicio; Poul H B Sorensen; Michelle M M Woo; Niki Boyd; Steven J M Jones; Martin Hirst; Marco A Marra; Blake Gilks; Sohrab P Shah; William D Foulkes; Gregg B Morin; David G Huntsman
Journal:  N Engl J Med       Date:  2011-12-21       Impact factor: 91.245

4.  Proliferation and tumorigenesis of a murine sarcoma cell line in the absence of DICER1.

Authors:  Arvind Ravi; Allan M Gurtan; Madhu S Kumar; Arjun Bhutkar; Christine Chin; Victoria Lu; Jacqueline A Lees; Tyler Jacks; Phillip A Sharp
Journal:  Cancer Cell       Date:  2012-06-12       Impact factor: 31.743

5.  Widespread deregulation of microRNA expression in human prostate cancer.

Authors:  M Ozen; C J Creighton; M Ozdemir; M Ittmann
Journal:  Oncogene       Date:  2007-09-24       Impact factor: 9.867

6.  Systematic evaluation of microRNA processing patterns in tissues, cell lines, and tumors.

Authors:  Eun Joo Lee; Myungwon Baek; Yuriy Gusev; Daniel J Brackett; Gerard J Nuovo; Thomas D Schmittgen
Journal:  RNA       Date:  2007-11-19       Impact factor: 4.942

7.  Contribution of Translin to hematopoietic regeneration after sublethal ionizing irradiation.

Authors:  Yuko Fukuda; Reiko Ishida; Katsunori Aoki; Kazuhiko Nakahara; Tohru Takashi; Keiji Mochida; Osamu Suzuki; Junichiro Matsuda; Masataka Kasai
Journal:  Biol Pharm Bull       Date:  2008-02       Impact factor: 2.233

8.  Nuclear export of microRNA precursors.

Authors:  Elsebet Lund; Stephan Güttinger; Angelo Calado; James E Dahlberg; Ulrike Kutay
Journal:  Science       Date:  2003-11-20       Impact factor: 47.728

9.  Widespread microRNA repression by Myc contributes to tumorigenesis.

Authors:  Tsung-Cheng Chang; Duonan Yu; Yun-Sil Lee; Erik A Wentzel; Dan E Arking; Kristin M West; Chi V Dang; Andrei Thomas-Tikhonenko; Joshua T Mendell
Journal:  Nat Genet       Date:  2007-12-09       Impact factor: 38.330

10.  Dicer is essential for mouse development.

Authors:  Emily Bernstein; Sang Yong Kim; Michelle A Carmell; Elizabeth P Murchison; Heather Alcorn; Mamie Z Li; Alea A Mills; Stephen J Elledge; Kathryn V Anderson; Gregory J Hannon
Journal:  Nat Genet       Date:  2003-10-05       Impact factor: 38.330

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  21 in total

Review 1.  Rapid reversal of translational silencing: Emerging role of microRNA degradation pathways in neuronal plasticity.

Authors:  Xiuping Fu; Aparna Shah; Jay M Baraban
Journal:  Neurobiol Learn Mem       Date:  2016-04-20       Impact factor: 2.877

Review 2.  The role of 3' end uridylation in RNA metabolism and cellular physiology.

Authors:  Dagmar Zigáčková; Štěpánka Vaňáčová
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-11-05       Impact factor: 6.237

3.  Biochemical characterization of clinically relevant mutations of human Translin.

Authors:  Vinayaki Pillai; Alka Gupta; Avssn Rao; Rajani Kant Chittela
Journal:  Mol Cell Biochem       Date:  2022-09-13       Impact factor: 3.842

4.  Translin facilitates RNA polymerase II dissociation and suppresses genome instability during RNase H2- and Dicer-deficiency.

Authors:  Natalia Gomez-Escobar; Ahad A A Alsaiari; Hanadi A S Alahamadi; Othman Alzahrani; Ellen Vernon; Hussam A E Althagafi; Nasser S Almobadel; David W Pryce; Jane A Wakeman; Ramsay J McFarlane
Journal:  PLoS Genet       Date:  2022-06-17       Impact factor: 6.020

Review 5.  Trax: A versatile signaling protein plays key roles in synaptic plasticity and DNA repair.

Authors:  Yijuang Chern; Ting Chien; Xiuping Fu; Aparna P Shah; Ted Abel; Jay M Baraban
Journal:  Neurobiol Learn Mem       Date:  2018-07-11       Impact factor: 2.877

Review 6.  Translin: A multifunctional protein involved in nucleic acid metabolism.

Authors:  Alka Gupta; Vinayaki S Pillai; Rajani Kant Chittela
Journal:  J Biosci       Date:  2019-12       Impact factor: 1.826

7.  Deletion of the microRNA-degrading nuclease, translin/trax, prevents pathogenic vascular stiffness.

Authors:  Eric Tuday; Yohei Nomura; Deepa Ruhela; Mitsunori Nakano; Xiuping Fu; Aparna Shah; Barbara Roman; Atsushi Yamaguchi; Steven S An; Charles Steenbergen; Jay M Baraban; Dan E Berkowitz; Samarjit Das
Journal:  Am J Physiol Heart Circ Physiol       Date:  2019-10-18       Impact factor: 4.733

8.  Learning induces the translin/trax RNase complex to express activin receptors for persistent memory.

Authors:  Alan Jung Park; Robbert Havekes; Xiuping Fu; Rolf Hansen; Jennifer C Tudor; Lucia Peixoto; Zhi Li; Yen-Ching Wu; Shane G Poplawski; Jay M Baraban; Ted Abel
Journal:  Elife       Date:  2017-09-20       Impact factor: 8.713

9.  TUT7 controls the fate of precursor microRNAs by using three different uridylation mechanisms.

Authors:  Boseon Kim; Minju Ha; Luuk Loeff; Hyeshik Chang; Dhirendra K Simanshu; Sisi Li; Mohamed Fareh; Dinshaw J Patel; Chirlmin Joo; V Narry Kim
Journal:  EMBO J       Date:  2015-05-15       Impact factor: 11.598

10.  Degradation of Premature-miR-181b by the Translin/Trax RNase Increases Vascular Smooth Muscle Cell Stiffness.

Authors:  Eric Tuday; Mitsunori Nakano; Kei Akiyoshi; Xiuping Fu; Aparna P Shah; Atsushi Yamaguchi; Charles Steenbergen; Lakshmi Santhanam; Steven S An; Dan Berkowitz; Jay M Baraban; Samarjit Das
Journal:  Hypertension       Date:  2021-07-26       Impact factor: 10.190

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