Literature DB >> 25451131

Leveraging biomedical informatics for assessing plasticity and repair in primate spinal cord injury.

Jessica L Nielson1, Jenny Haefeli1, Ernesto A Salegio1, Aiwen W Liu1, Cristian F Guandique1, Ellen D Stück1, Stephanie Hawbecker2, Rod Moseanko2, Sarah C Strand2, Sharon Zdunowski3, John H Brock4, Roland R Roy3, Ephron S Rosenzweig4, Yvette S Nout-Lomas5, Gregoire Courtine6, Leif A Havton7, Oswald Steward8, V Reggie Edgerton3, Mark H Tuszynski9, Michael S Beattie1, Jacqueline C Bresnahan1, Adam R Ferguson10.   

Abstract

Recent preclinical advances highlight the therapeutic potential of treatments aimed at boosting regeneration and plasticity of spinal circuitry damaged by spinal cord injury (SCI). With several promising candidates being considered for translation into clinical trials, the SCI community has called for a non-human primate model as a crucial validation step to test efficacy and validity of these therapies prior to human testing. The present paper reviews the previous and ongoing efforts of the California Spinal Cord Consortium (CSCC), a multidisciplinary team of experts from 5 University of California medical and research centers, to develop this crucial translational SCI model. We focus on the growing volumes of high resolution data collected by the CSCC, and our efforts to develop a biomedical informatics framework aimed at leveraging multidimensional data to monitor plasticity and repair targeting recovery of hand and arm function. Although the main focus of many researchers is the restoration of voluntary motor control, we also describe our ongoing efforts to add assessments of sensory function, including pain, vital signs during surgery, and recovery of bladder and bowel function. By pooling our multidimensional data resources and building a unified database infrastructure for this clinically relevant translational model of SCI, we are now in a unique position to test promising therapeutic strategies' efficacy on the entire syndrome of SCI. We review analyses highlighting the intersection between motor, sensory, autonomic and pathological contributions to the overall restoration of function. This article is part of a Special Issue entitled SI: Spinal cord injury.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Autonomic function; Big-data; Bioinformatics; Motor function; Non-human primate; Plasticity; Recovery; Sensory function; Spinal cord injury; Statistics; Syndromics; Translation

Mesh:

Year:  2014        PMID: 25451131      PMCID: PMC4418964          DOI: 10.1016/j.brainres.2014.10.048

Source DB:  PubMed          Journal:  Brain Res        ISSN: 0006-8993            Impact factor:   3.252


  86 in total

1.  Responses of spinothalamic tract neurons to mechanical and thermal stimuli in an experimental model of peripheral neuropathy in primates.

Authors:  J Palecek; P M Dougherty; S H Kim; V Palecková; H Lekan; J M Chung; S M Carlton; W D Willis
Journal:  J Neurophysiol       Date:  1992-12       Impact factor: 2.714

2.  Research electronic data capture (REDCap)--a metadata-driven methodology and workflow process for providing translational research informatics support.

Authors:  Paul A Harris; Robert Taylor; Robert Thielke; Jonathon Payne; Nathaniel Gonzalez; Jose G Conde
Journal:  J Biomed Inform       Date:  2008-09-30       Impact factor: 6.317

3.  Basso Mouse Scale for locomotion detects differences in recovery after spinal cord injury in five common mouse strains.

Authors:  D Michele Basso; Lesley C Fisher; Aileen J Anderson; Lyn B Jakeman; Dana M McTigue; Phillip G Popovich
Journal:  J Neurotrauma       Date:  2006-05       Impact factor: 5.269

4.  Reorganization of somatosensory cortical areas 3b and 1 after unilateral section of dorsal columns of the spinal cord in squirrel monkeys.

Authors:  Hui-Xin Qi; Li M Chen; Jon H Kaas
Journal:  J Neurosci       Date:  2011-09-21       Impact factor: 6.167

5.  Prediction and stratification of upper limb function and self-care in acute cervical spinal cord injury with the graded redefined assessment of strength, sensibility, and prehension (GRASSP).

Authors:  Inge-Marie Velstra; Marc Bolliger; Lorenzo Giuseppe Tanadini; Michael Baumberger; Rainer Abel; Johan S Rietman; Armin Curt
Journal:  Neurorehabil Neural Repair       Date:  2014-02-24       Impact factor: 3.919

6.  Peripheral nerve grafts promoting central nervous system regeneration after spinal cord injury in the primate.

Authors:  Allan D O Levi; Hector Dancausse; Xiuming Li; Suzanne Duncan; Laura Horkey; Maria Oliviera
Journal:  J Neurosurg       Date:  2002-03       Impact factor: 5.115

Review 7.  Translating preclinical approaches into human application.

Authors:  Volker Dietz; Armin Curt
Journal:  Handb Clin Neurol       Date:  2012

8.  Cell death after spinal cord injury is exacerbated by rapid TNF alpha-induced trafficking of GluR2-lacking AMPARs to the plasma membrane.

Authors:  Adam R Ferguson; Randolph N Christensen; John C Gensel; Brandon A Miller; Fang Sun; Eric C Beattie; Jacqueline C Bresnahan; Michael S Beattie
Journal:  J Neurosci       Date:  2008-10-29       Impact factor: 6.167

9.  Corticospinal sprouting differs according to spinal injury location and cortical origin in macaque monkeys.

Authors:  Corinna Darian-Smith; Alayna Lilak; Joseph Garner; Karen-Amanda Irvine
Journal:  J Neurosci       Date:  2014-09-10       Impact factor: 6.167

10.  Minimum information about a spinal cord injury experiment: a proposed reporting standard for spinal cord injury experiments.

Authors:  Vance P Lemmon; Adam R Ferguson; Phillip G Popovich; Xiao-Ming Xu; Diane M Snow; Michihiro Igarashi; Christine E Beattie; John L Bixby
Journal:  J Neurotrauma       Date:  2014-07-11       Impact factor: 5.269

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  7 in total

1.  FAIR SCI Ahead: The Evolution of the Open Data Commons for Pre-Clinical Spinal Cord Injury Research.

Authors:  Karim Fouad; John L Bixby; Alison Callahan; Jeffrey S Grethe; Lyn B Jakeman; Vance P Lemmon; David S K Magnuson; Maryann E Martone; Jessica L Nielson; Jan M Schwab; Carol Taylor-Burds; Wolfram Tetzlaff; Abel Torres-Espin; Adam R Ferguson
Journal:  J Neurotrauma       Date:  2019-12-06       Impact factor: 5.269

Review 2.  Developing a data sharing community for spinal cord injury research.

Authors:  Alison Callahan; Kim D Anderson; Michael S Beattie; John L Bixby; Adam R Ferguson; Karim Fouad; Lyn B Jakeman; Jessica L Nielson; Phillip G Popovich; Jan M Schwab; Vance P Lemmon
Journal:  Exp Neurol       Date:  2017-05-30       Impact factor: 5.330

Review 3.  A ventral root avulsion injury model for neurogenic underactive bladder studies.

Authors:  Huiyi H Chang; Leif A Havton
Journal:  Exp Neurol       Date:  2016-05-21       Impact factor: 5.330

4.  A Unilateral Cervical Spinal Cord Contusion Injury Model in Non-Human Primates (Macaca mulatta).

Authors:  Ernesto A Salegio; Jacqueline C Bresnahan; Carolyn J Sparrey; William Camisa; Jason Fischer; Jeremi Leasure; Jennifer Buckley; Yvette S Nout-Lomas; Ephron S Rosenzweig; Rod Moseanko; Sarah Strand; Stephanie Hawbecker; Marie-Josee Lemoy; Jenny Haefeli; Xiaokui Ma; Jessica L Nielson; V R Edgerton; Adam R Ferguson; Mark H Tuszynski; Michael S Beattie
Journal:  J Neurotrauma       Date:  2016-01-20       Impact factor: 5.269

5.  Reproducible analysis of disease space via principal components using the novel R package syndRomics.

Authors:  Abel Torres-Espín; Austin Chou; J Russell Huie; Nikos Kyritsis; Pavan S Upadhyayula; Adam R Ferguson
Journal:  Elife       Date:  2021-01-14       Impact factor: 8.140

Review 6.  Plasticity and Recovery After Dorsal Column Spinal Cord Injury in Nonhuman Primates.

Authors:  Jamie L Reed; Chia-Chi Liao; Hui-Xin Qi; Jon H Kaas
Journal:  J Exp Neurosci       Date:  2016-08-18

7.  Applying univariate vs. multivariate statistics to investigate therapeutic efficacy in (pre)clinical trials: A Monte Carlo simulation study on the example of a controlled preclinical neurotrauma trial.

Authors:  Hristo Todorov; Emily Searle-White; Susanne Gerber
Journal:  PLoS One       Date:  2020-03-26       Impact factor: 3.240

  7 in total

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