Literature DB >> 25447271

Clustering of clinical and environmental Escherichia coli O104 isolates using the DiversiLab™ repetitive sequence-based PCR system.

N M Herbold1, L M Clotilde, K M Anderson, J Kase, G L Hartman, S Himathongkham, A Lin, C R Lauzon.   

Abstract

The DiversiLab™ rep-PCR system was used to amplify DNA regions of 28 well-characterized Escherichia coli O104 strains to generate a digital DNA fingerprint profile for strain differentiation. E. coli O104 strains from human stools and other sources were examined. The results indicate that this system can cluster similar O104 strains rapidly.

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Year:  2014        PMID： 25447271     DOI： 10.1007/s00284-014-0728-z

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN： 0343-8651            Impact factor:   2.188


  27 in total

1.  Evaluation of repetitive element sequence-based PCR as a molecular typing method for Clostridium difficile.

Authors:  Patrizia Spigaglia; Paola Mastrantonio
Journal:  J Clin Microbiol       Date:  2003-06       Impact factor: 5.948

2.  Microbial DNA typing by automated repetitive-sequence-based PCR.

Authors:  Mimi Healy; Joe Huong; Traci Bittner; Maricel Lising; Stacie Frye; Sabeen Raza; Robert Schrock; Janet Manry; Alex Renwick; Robert Nieto; Charles Woods; James Versalovic; James R Lupski
Journal:  J Clin Microbiol       Date:  2005-01       Impact factor: 5.948

3.  Clinical evaluation of repetitive sequence-based polymerase chain reaction using the Diversi-Lab System for strain typing of vancomycin-resistant enterococci.

Authors:  June I Pounder; Cheryl K Shutt; Barbara J Schaecher; Gail L Woods
Journal:  Diagn Microbiol Infect Dis       Date:  2006-01-19       Impact factor: 2.803

4.  Applications of the rep-PCR DNA fingerprinting technique to study microbial diversity, ecology and evolution.

Authors:  Satoshi Ishii; Michael J Sadowsky
Journal:  Environ Microbiol       Date:  2009-02-19       Impact factor: 5.491

5.  Haemolytic uraemic syndrome.

Authors:  M Levin; J M Barratt
Journal:  Arch Dis Child       Date:  1984-05       Impact factor: 3.791

6.  German outbreak of Escherichia coli O104:H4 associated with sprouts.

Authors:  Udo Buchholz; Helen Bernard; Dirk Werber; Merle M Böhmer; Cornelius Remschmidt; Hendrik Wilking; Yvonne Deleré; Matthias an der Heiden; Cornelia Adlhoch; Johannes Dreesman; Joachim Ehlers; Steen Ethelberg; Mirko Faber; Christina Frank; Gerd Fricke; Matthias Greiner; Michael Höhle; Sofie Ivarsson; Uwe Jark; Markus Kirchner; Judith Koch; Gérard Krause; Petra Luber; Bettina Rosner; Klaus Stark; Michael Kühne
Journal:  N Engl J Med       Date:  2011-10-26       Impact factor: 91.245

7.  Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes.

Authors:  J Versalovic; T Koeuth; J R Lupski
Journal:  Nucleic Acids Res       Date:  1991-12-25       Impact factor: 16.971

8.  Prevalence and molecular epidemiology of CTX-M extended-spectrum beta-lactamase-producing Escherichia coli and Klebsiella pneumoniae in Russian hospitals.

Authors:  M Edelstein; M Pimkin; I Palagin; I Edelstein; L Stratchounski
Journal:  Antimicrob Agents Chemother       Date:  2003-12       Impact factor: 5.191

9.  Use of the DiversiLab semiautomated repetitive-sequence-based polymerase chain reaction for epidemiologic analysis on Acinetobacter baumannii isolates in different Italian hospitals.

Authors:  Edoardo Carretto; Daniela Barbarini; Claudio Farina; Alessia Grosini; Pierluigi Nicoletti; Esther Manso
Journal:  Diagn Microbiol Infect Dis       Date:  2007-09-21       Impact factor: 2.803

10.  Predicting Salmonella enterica serotypes by repetitive sequence-based PCR.

Authors:  Mark G Wise; Gregory R Siragusa; Jodie Plumblee; Mimi Healy; Paula J Cray; Bruce S Seal
Journal:  J Microbiol Methods       Date:  2008-09-14       Impact factor: 2.363
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  1 in total

1.  Antibiotic Susceptibility, Genetic Diversity, and the Presence of Toxin Producing Genes in Campylobacter Isolates from Poultry.

Authors:  Jeeyeon Lee; Jiyeon Jeong; Heeyoung Lee; Jimyeong Ha; Sejeong Kim; Yukyung Choi; Hyemin Oh; Kunho Seo; Yohan Yoon; Soomin Lee
Journal:  Int J Environ Res Public Health       Date:  2017-11-17       Impact factor: 3.390
  1 in total

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