Literature DB >> 25436039

AIRWAY LABELING USING A HIDDEN MARKOV TREE MODEL.

James C Ross1, Alejandro A Díaz2, Yuka Okajima3, Demian Wassermann4, George R Washko2, Jennifer Dy5, Raúl San José Estépar6.   

Abstract

We present a novel airway labeling algorithm based on a Hidden Markov Tree Model (HMTM). We obtain a collection of discrete points along the segmented airway tree using particles sampling [1] and establish topology using Kruskal's minimum spanning tree algorithm. Following this, our HMTM algorithm probabilistically assigns labels to each point. While alternative methods label airway branches out to the segmental level, we describe a general method and demonstrate its performance out to the subsubsegmental level (two generations further than previously published approaches). We present results on a collection of 25 computed tomography (CT) datasets taken from a Chronic Obstructive Pulmonary Disease (COPD) study.

Entities:  

Year:  2014        PMID: 25436039      PMCID: PMC4245147          DOI: 10.1109/ISBI.2014.6867931

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  9 in total

1.  Airway count and emphysema assessed by chest CT imaging predicts clinical outcome in smokers.

Authors:  Alejandro A Diaz; Clarissa Valim; Tsuneo Yamashiro; Raúl San José Estépar; James C Ross; Shin Matsuoka; Brian Bartholmai; Hiroto Hatabu; Edwin K Silverman; George R Washko
Journal:  Chest       Date:  2010-06-17       Impact factor: 9.410

2.  Matching and anatomical labeling of human airway tree.

Authors:  Juerg Tschirren; Geoffrey McLennan; Kálmán Palágyi; Eric A Hoffman; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2005-12       Impact factor: 10.048

3.  Robust segmentation and anatomical labeling of the airway tree from thoracic CT scans.

Authors:  Bram van Ginneken; Wouter Baggerman; Eva M van Rikxoort
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

4.  Deaths: preliminary data for 2009.

Authors:  Kenneth D Kochanek; Jiaquan Xu; Sherry L Murphy; Arialdi M Miniño; Hsiang-Ching Kung
Journal:  Natl Vital Stat Rep       Date:  2011-03

5.  The definition of emphysema. Report of a National Heart, Lung, and Blood Institute, Division of Lung Diseases workshop.

Authors: 
Journal:  Am Rev Respir Dis       Date:  1985-07

6.  Small-airway obstruction and emphysema in chronic obstructive pulmonary disease.

Authors:  John E McDonough; Ren Yuan; Masaru Suzuki; Nazgol Seyednejad; W Mark Elliott; Pablo G Sanchez; Alexander C Wright; Warren B Gefter; Leslie Litzky; Harvey O Coxson; Peter D Paré; Don D Sin; Richard A Pierce; Jason C Woods; Annette M McWilliams; John R Mayo; Stephen C Lam; Joel D Cooper; James C Hogg
Journal:  N Engl J Med       Date:  2011-10-27       Impact factor: 91.245

Review 7.  The pathology of chronic obstructive pulmonary disease.

Authors:  James C Hogg; Wim Timens
Journal:  Annu Rev Pathol       Date:  2009       Impact factor: 23.472

8.  Sampling and visualizing creases with scale-space particles.

Authors:  Gordon L Kindlmann; Raúl San José Estépar; Stephen M Smith; Carl-Fredrik Westin
Journal:  IEEE Trans Vis Comput Graph       Date:  2009 Nov-Dec       Impact factor: 4.579

9.  A hierarchical scheme for geodesic anatomical labeling of airway trees.

Authors:  Aasa Feragen; Jens Petersen; Megan Owen; Pechin Lo; Laura H Thomsen; Mathilde M W Wille; Asger Dirksen; Marleen de Bruijne
Journal:  Med Image Comput Comput Assist Interv       Date:  2012
  9 in total

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