Literature DB >> 25435307

Prochlorococcus: the structure and function of collective diversity.

Steven J Biller1, Paul M Berube1, Debbie Lindell2, Sallie W Chisholm3.   

Abstract

The marine cyanobacterium Prochlorococcus is the smallest and most abundant photosynthetic organism on Earth. In this Review, we summarize our understanding of the diversity of this remarkable phototroph and describe its role in ocean ecosystems. We discuss the importance of interactions of Prochlorococcus with the physical environment, with phages and with heterotrophs in shaping the ecology and evolution of this group. In light of recent studies, we have come to view Prochlorococcus as a 'federation' of diverse cells that sustains its broad distribution, stability and abundance in the oceans via extensive genomic and phenotypic diversity. Thus, it is proving to be a useful model system for elucidating the forces that shape microbial populations and ecosystems.

Mesh:

Year:  2014        PMID: 25435307     DOI: 10.1038/nrmicro3378

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  122 in total

1.  Small phytoplankton and carbon export from the surface ocean.

Authors:  Tammi L Richardson; George A Jackson
Journal:  Science       Date:  2007-02-09       Impact factor: 47.728

2.  Ecology of uncultured Prochlorococcus clades revealed through single-cell genomics and biogeographic analysis.

Authors:  Rex R Malmstrom; Sébastien Rodrigue; Katherine H Huang; Libusha Kelly; Suzanne E Kern; Anne Thompson; Sara Roggensack; Paul M Berube; Matthew R Henn; Sallie W Chisholm
Journal:  ISME J       Date:  2012-08-16       Impact factor: 10.302

3.  Catalytic promiscuity in the biosynthesis of cyclic peptide secondary metabolites in planktonic marine cyanobacteria.

Authors:  Bo Li; Daniel Sher; Libusha Kelly; Yanxiang Shi; Katherine Huang; Patrick J Knerr; Ike Joewono; Doug Rusch; Sallie W Chisholm; Wilfred A van der Donk
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-17       Impact factor: 11.205

4.  Widespread metabolic potential for nitrite and nitrate assimilation among Prochlorococcus ecotypes.

Authors:  Adam C Martiny; Satish Kathuria; Paul M Berube
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-23       Impact factor: 11.205

5.  Ocean time-series reveals recurring seasonal patterns of virioplankton dynamics in the northwestern Sargasso Sea.

Authors:  Rachel J Parsons; Mya Breitbart; Michael W Lomas; Craig A Carlson
Journal:  ISME J       Date:  2011-08-11       Impact factor: 10.302

6.  Sulfolipids dramatically decrease phosphorus demand by picocyanobacteria in oligotrophic marine environments.

Authors:  Benjamin A S Van Mooy; Gabrielle Rocap; Helen F Fredricks; Colleen T Evans; Allan H Devol
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-26       Impact factor: 11.205

7.  Phosphate acquisition genes in Prochlorococcus ecotypes: evidence for genome-wide adaptation.

Authors:  Adam C Martiny; Maureen L Coleman; Sallie W Chisholm
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-08       Impact factor: 11.205

8.  Bacterial vesicles in marine ecosystems.

Authors:  Steven J Biller; Florence Schubotz; Sara E Roggensack; Anne W Thompson; Roger E Summons; Sallie W Chisholm
Journal:  Science       Date:  2014-01-10       Impact factor: 47.728

9.  Phage auxiliary metabolic genes and the redirection of cyanobacterial host carbon metabolism.

Authors:  Luke R Thompson; Qinglu Zeng; Libusha Kelly; Katherine H Huang; Alexander U Singer; Joanne Stubbe; Sallie W Chisholm
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-15       Impact factor: 11.205

10.  Environmental genome shotgun sequencing of the Sargasso Sea.

Authors:  J Craig Venter; Karin Remington; John F Heidelberg; Aaron L Halpern; Doug Rusch; Jonathan A Eisen; Dongying Wu; Ian Paulsen; Karen E Nelson; William Nelson; Derrick E Fouts; Samuel Levy; Anthony H Knap; Michael W Lomas; Ken Nealson; Owen White; Jeremy Peterson; Jeff Hoffman; Rachel Parsons; Holly Baden-Tillson; Cynthia Pfannkoch; Yu-Hui Rogers; Hamilton O Smith
Journal:  Science       Date:  2004-03-04       Impact factor: 47.728

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  136 in total

1.  Niche partitioning and biogeography of high light adapted Prochlorococcus across taxonomic ranks in the North Pacific.

Authors:  Alyse A Larkin; Sara K Blinebry; Caroline Howes; Yajuan Lin; Sarah E Loftus; Carrie A Schmaus; Erik R Zinser; Zackary I Johnson
Journal:  ISME J       Date:  2016-01-22       Impact factor: 10.302

2.  Evolutionary radiation of lanthipeptides in marine cyanobacteria.

Authors:  Andres Cubillos-Ruiz; Jessie W Berta-Thompson; Jamie W Becker; Wilfred A van der Donk; Sallie W Chisholm
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-19       Impact factor: 11.205

3.  Single-cell genomics unveiled a cryptic cyanobacterial lineage with a worldwide distribution hidden by a dinoflagellate host.

Authors:  Takuro Nakayama; Mami Nomura; Yoshihito Takano; Goro Tanifuji; Kogiku Shiba; Kazuo Inaba; Yuji Inagaki; Masakado Kawata
Journal:  Proc Natl Acad Sci U S A       Date:  2019-06-24       Impact factor: 11.205

4.  Global-level population genomics reveals differential effects of geography and phylogeny on horizontal gene transfer in soil bacteria.

Authors:  Alex Greenlon; Peter L Chang; Zehara Mohammed Damtew; Atsede Muleta; Noelia Carrasquilla-Garcia; Donghyun Kim; Hien P Nguyen; Vasantika Suryawanshi; Christopher P Krieg; Sudheer Kumar Yadav; Jai Singh Patel; Arpan Mukherjee; Sripada Udupa; Imane Benjelloun; Imane Thami-Alami; Mohammad Yasin; Bhuvaneshwara Patil; Sarvjeet Singh; Birinchi Kumar Sarma; Eric J B von Wettberg; Abdullah Kahraman; Bekir Bukun; Fassil Assefa; Kassahun Tesfaye; Asnake Fikre; Douglas R Cook
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-08       Impact factor: 11.205

5.  The structure of a highly-conserved picocyanobacterial protein reveals a Tudor domain with an RNA-binding function.

Authors:  Katherine M Bauer; Rose Dicovitsky; Maria Pellegrini; Olga Zhaxybayeva; Michael J Ragusa
Journal:  J Biol Chem       Date:  2019-08-07       Impact factor: 5.157

6.  Red Sea SAR11 and Prochlorococcus Single-Cell Genomes Reflect Globally Distributed Pangenomes.

Authors:  Luke R Thompson; Mohamed F Haroon; Ahmed A Shibl; Matt J Cahill; David K Ngugi; Gareth J Williams; James T Morton; Rob Knight; Kelly D Goodwin; Ulrich Stingl
Journal:  Appl Environ Microbiol       Date:  2019-06-17       Impact factor: 4.792

7.  Coordinated regulation of growth, activity and transcription in natural populations of the unicellular nitrogen-fixing cyanobacterium Crocosphaera.

Authors:  Samuel T Wilson; Frank O Aylward; Francois Ribalet; Benedetto Barone; John R Casey; Paige E Connell; John M Eppley; Sara Ferrón; Jessica N Fitzsimmons; Christopher T Hayes; Anna E Romano; Kendra A Turk-Kubo; Alice Vislova; E Virginia Armbrust; David A Caron; Matthew J Church; Jonathan P Zehr; David M Karl; Edward F DeLong
Journal:  Nat Microbiol       Date:  2017-07-31       Impact factor: 17.745

8.  Excess of non-conservative amino acid changes in marine bacterioplankton lineages with reduced genomes.

Authors:  Haiwei Luo; Yongjie Huang; Ramunas Stepanauskas; Jijun Tang
Journal:  Nat Microbiol       Date:  2017-06-12       Impact factor: 17.745

Review 9.  Mechanistic Understanding of Lanthipeptide Biosynthetic Enzymes.

Authors:  Lindsay M Repka; Jonathan R Chekan; Satish K Nair; Wilfred A van der Donk
Journal:  Chem Rev       Date:  2017-01-30       Impact factor: 60.622

10.  Fundamental differences in diversity and genomic population structure between Atlantic and Pacific Prochlorococcus.

Authors:  Nadav Kashtan; Sara E Roggensack; Jessie W Berta-Thompson; Maor Grinberg; Ramunas Stepanauskas; Sallie W Chisholm
Journal:  ISME J       Date:  2017-05-19       Impact factor: 10.302

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