Literature DB >> 25428162

Leukodepletion as a point-of-care method for monitoring HIV-1 viral load in whole blood.

Logan Titchmarsh1, Clement Zeh2, Thierry Verpoort3, Jean-Pierre Allain4, Helen Lee5.   

Abstract

In order to limit the interference of HIV-1 cellular nucleic acids in estimating viral load (VL), the feasibility of leukodepletion of a small whole-blood (WB) volume to eliminate only leukocyte cell content was investigated, using a selection of filters. The efficacy of leukocyte filtration was evaluated by counting, CD45 quantitative PCR, and HIV-1 DNA quantification. Plasma HIV-1 was tested by real-time reverse transcription (RT)-PCR. A specific, miniaturized filter was developed and tested for leukocyte and plasma virus retention, WB sample dilution, and filtration parameters in HIV-1-spiked WB samples. This device proved effective to retain >99.9% of white blood cells in 100 μl of WB without affecting plasma VL. The Samba sample preparation chemistry was adapted to use a leukodepleted WB sample for VL monitoring using the point-of-care Samba-1 semiautomated system. The clinical performance of the assay was evaluated by testing 207 consecutive venous EDTA WB samples from HIV-1-infected patients attending a CD4 testing clinic. Most patients were on antiretroviral treatment (ART), but their VL status was unknown. Compared to the Roche Cobas AmpliPrep/Cobas TaqMan HIV-1 test, the new Samba assay had a concordance of 96.5%. The use of the Samba system with a VL test for WB might contribute to HIV-1 ART management and reduce loss-to-follow-up rates in resource-limited settings.
Copyright © 2015, American Society for Microbiology. All Rights Reserved.

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Year:  2014        PMID: 25428162      PMCID: PMC4365239          DOI: 10.1128/JCM.02853-14

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  17 in total

1.  Evaluation of filter paper transfer of whole-blood and plasma samples for quantifying HIV RNA in subjects on antiretroviral therapy in Uganda.

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Journal:  J Acquir Immune Defic Syndr       Date:  2007-12-15       Impact factor: 3.731

2.  Quantitation of HIV-1 RNA in dried blood spots by the real-time NucliSENS EasyQ HIV-1 assay in Senegal.

Authors:  Coumba Toure Kane; Halimatou Diop Ndiaye; Sada Diallo; Ibrahima Ndiaye; Abdoulaye Sidibé Wade; Papa Alassane Diaw; Aïssatou Gaye-Diallo; Souleymane Mboup
Journal:  J Virol Methods       Date:  2008-02-01       Impact factor: 2.014

3.  Preliminary assessment of whole-blood, red-cell and platelet- leucodepleting filters for possible induction of prion release by leucocyte fragmentation during room temperature processing.

Authors:  C V Prowse; V S Hornsey; O Drummond; I R MacGregor; D S Pepper; G R Barclay; H Bethel; B Walker; G Barnard; L Kirby; J Hope
Journal:  Br J Haematol       Date:  1999-07       Impact factor: 6.998

4.  Dried blood spots perform well in viral load monitoring of patients who receive antiretroviral treatment in rural Tanzania.

Authors:  Asgeir Johannessen; Carolina Garrido; Natalia Zahonero; Leiv Sandvik; Ezra Naman; Sokoine L Kivuyo; Mabula J Kasubi; Svein G Gundersen; Johan N Bruun; Carmen de Mendoza
Journal:  Clin Infect Dis       Date:  2009-09-15       Impact factor: 9.079

5.  Simple amplification-based assay: a nucleic acid-based point-of-care platform for HIV-1 testing.

Authors:  Helen H Lee; Magda A Dineva; Yii Leng Chua; Allyson V Ritchie; Ines Ushiro-Lumb; Craig A Wisniewski
Journal:  J Infect Dis       Date:  2010-04-15       Impact factor: 5.226

6.  Multiplex real-time quantitative RT-PCR assay for hepatitis B virus, hepatitis C virus, and human immunodeficiency virus type 1.

Authors:  Daniel Candotti; Jillian Temple; Shirley Owusu-Ofori; Jean-Pierre Allain
Journal:  J Virol Methods       Date:  2004-06-01       Impact factor: 2.014

7.  Evaluation of a dried blood spot HIV-1 RNA program for early infant diagnosis and viral load monitoring at rural and remote healthcare facilities.

Authors:  Sarah M Lofgren; Anne B Morrissey; Caroline C Chevallier; Anangisye I Malabeja; Sally Edmonds; Ben Amos; David J Sifuna; Lorenz von Seidlein; Werner Schimana; Wendy S Stevens; John A Bartlett; John A Crump
Journal:  AIDS       Date:  2009-11-27       Impact factor: 4.177

8.  Correlation between human immunodeficiency virus type 1 (HIV-1) RNA measurements obtained with dried blood spots and those obtained with plasma by use of Nuclisens EasyQ HIV-1 and Abbott RealTime HIV load tests.

Authors:  Carolina Garrido; Natalia Zahonero; Angélica Corral; Miguel Arredondo; Vincent Soriano; Carmen de Mendoza
Journal:  J Clin Microbiol       Date:  2009-02-04       Impact factor: 5.948

9.  Evaluation of different RNA extraction methods and storage conditions of dried plasma or blood spots for human immunodeficiency virus type 1 RNA quantification and PCR amplification for drug resistance testing.

Authors:  Marjorie Monleau; Céline Montavon; Christian Laurent; Michel Segondy; Brigitte Montes; Eric Delaporte; François Boillot; Martine Peeters
Journal:  J Clin Microbiol       Date:  2009-02-04       Impact factor: 5.948

10.  SAMBA HIV semiquantitative test, a new point-of-care viral-load-monitoring assay for resource-limited settings.

Authors:  Allyson V Ritchie; Ines Ushiro-Lumb; Daniel Edemaga; Hrishikesh A Joshi; Annemiek De Ruiter; Elisabeth Szumilin; Isabelle Jendrulek; Megan McGuire; Neha Goel; Pia I Sharma; Jean-Pierre Allain; Helen H Lee
Journal:  J Clin Microbiol       Date:  2014-07-16       Impact factor: 5.948

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  9 in total

Review 1.  Point-of-Care HIV Viral Load Testing: an Essential Tool for a Sustainable Global HIV/AIDS Response.

Authors:  Paul K Drain; Jienchi Dorward; Andrew Bender; Lorraine Lillis; Francesco Marinucci; Jilian Sacks; Anna Bershteyn; David S Boyle; Jonathan D Posner; Nigel Garrett
Journal:  Clin Microbiol Rev       Date:  2019-05-15       Impact factor: 26.132

Review 2.  Point-of-care viral load tests to detect high HIV viral load in people living with HIV/AIDS attending health facilities.

Authors:  Eleanor A Ochodo; Easter Elizabeth Olwanda; Jonathan J Deeks; Sue Mallett
Journal:  Cochrane Database Syst Rev       Date:  2022-03-10

3.  Evaluation of SAMBA II: A Qualitative and Semiquantitative HIV Point-of-Care Nucleic Acid Test.

Authors:  Lauren R Violette; Andy Cornelius-Hudson; Madison Snidarich; Lisa A Niemann; Sonny Michael Assennato; Allyson Ritchie; Neha Goel; Pollyanna R Chavez; Steven F Ethridge; David A Katz; Helen Lee; Kevin P Delaney; Joanne D Stekler
Journal:  J Acquir Immune Defic Syndr       Date:  2022-04-15       Impact factor: 3.771

Review 4.  Diagnosis of Human Immunodeficiency Virus Infection.

Authors:  Bharat S Parekh; Chin-Yih Ou; Peter N Fonjungo; Mireille B Kalou; Erin Rottinghaus; Adrian Puren; Heather Alexander; Mackenzie Hurlston Cox; John N Nkengasong
Journal:  Clin Microbiol Rev       Date:  2018-11-28       Impact factor: 26.132

5.  Evaluation of the performance of Abbott m2000 and Roche COBAS Ampliprep/COBAS Taqman assays for HIV-1 viral load determination using dried blood spots and dried plasma spots in Kenya.

Authors:  Clement Zeh; Kenneth Ndiege; Seth Inzaule; Rebecca Achieng; John Williamson; Joy Chih-Wei Chang; Dennis Ellenberger; John Nkengasong
Journal:  PLoS One       Date:  2017-06-16       Impact factor: 3.240

6.  Patient Experiences of Decentralized HIV Treatment and Care in Plateau State, North Central Nigeria: A Qualitative Study.

Authors:  Grace O Kolawole; Hannah N Gilbert; Nancin Y Dadem; Becky L Genberg; Patricia A Agaba; Prosper Okonkwo; Oche O Agbaji; Norma C Ware
Journal:  AIDS Res Treat       Date:  2017-02-26

7.  Systematic review of the performance and clinical utility of point of care HIV-1 RNA testing for diagnosis and care.

Authors:  Clara A Agutu; Caroline J Ngetsa; Matt A Price; Tobias F Rinke de Wit; Gloria Omosa-Manyonyi; Eduard J Sanders; Susan M Graham
Journal:  PLoS One       Date:  2019-06-27       Impact factor: 3.240

8.  Extracellular vesicles from plasma have higher tumour RNA fraction than platelets.

Authors:  Kay Brinkman; Lisa Meyer; Anne Bickel; Daniel Enderle; Carola Berking; Johan Skog; Mikkel Noerholm
Journal:  J Extracell Vesicles       Date:  2020-03-25

9.  Study To Evaluate the Performance of a Point-of-Care Whole-Blood HIV Viral Load Test (SAMBA II HIV-1 Semi-Q Whole Blood).

Authors:  Gary Brook; Tetiana Stepchenkova; Innocent M Ali; Sandra Chipuka; Neha Goel; Helen Lee
Journal:  J Clin Microbiol       Date:  2021-02-18       Impact factor: 5.948

  9 in total

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