(N)-Methanocarba adenosine 5'-methyluronamides containing 2-arylethynyl groups were synthesized as A3 adenosine receptor (AR) agonists and screened in vivo (po) for reduction of neuropathic pain. A small N(6)-methyl group maintained binding affinity, with human > mouse A3AR and MW < 500 and other favorable physicochemical properties. Emax (maximal efficacy in a mouse chronic constriction injury pain model) of previously characterized A3AR agonist, 2-(3,4-difluorophenylethynyl)-N(6)-(3-chlorobenzyl) derivative 6a, MRS5698, was surpassed. More efficacious analogues (in vivo) contained the following C2-arylethynyl groups: pyrazin-2-yl 23 (binding Ki, hA3AR, nM 1.8), fur-2-yl 27 (0.6), thien-2-yl 32 (0.6) and its 5-chloro 33, MRS5980 (0.7) and 5-bromo 34 (0.4) equivalents, and physiologically unstable ferrocene 36, MRS5979 (2.7). 33 and 36 displayed particularly long in vivo duration (>3 h). Selected analogues were docked to an A3AR homology model to explore the environment of receptor-bound C2 and N(6) groups. Various analogues bound with μM affinity at off-target biogenic amine (M2, 5HT2A, β3, 5HT2B, 5HT2C, and α2C) or other receptors. Thus, we have expanded the structural range of orally active A3AR agonists for chronic pain treatment.
(N)-Methanocarba adenosine 5'-methyluronamides containing 2-arylethynyl groups were synthesized as A3 adenosine receptor (AR) agonists and screened in vivo (po) for reduction of neuropathic pain. A small N(6)-methyl group maintained binding affinity, with human > mouseA3AR and MW < 500 and other favorable physicochemical properties. Emax (maximal efficacy in a mouse chronic constriction injury pain model) of previously characterized A3AR agonist, 2-(3,4-difluorophenylethynyl)-N(6)-(3-chlorobenzyl) derivative 6a, MRS5698, was surpassed. More efficacious analogues (in vivo) contained the following C2-arylethynyl groups: pyrazin-2-yl 23 (binding Ki, hA3AR, nM 1.8), fur-2-yl 27 (0.6), thien-2-yl 32 (0.6) and its 5-chloro 33, MRS5980 (0.7) and 5-bromo 34 (0.4) equivalents, and physiologically unstable ferrocene 36, MRS5979 (2.7). 33 and 36 displayed particularly long in vivo duration (>3 h). Selected analogues were docked to an A3AR homology model to explore the environment of receptor-bound C2 and N(6) groups. Various analogues bound with μM affinity at off-target biogenic amine (M2, 5HT2A, β3, 5HT2B, 5HT2C, and α2C) or other receptors. Thus, we have expanded the structural range of orally active A3AR agonists for chronic pain treatment.
Chronic neuropathic pain (NP) is a widespread
condition that is often associated with diabetes, cancer, injury,
exposure to toxic substances, and a variety of other diseases.[1,2] When it occurs subsequent to cancer chemotherapy, it often necessitates
the discontinuation of a life-saving treatment. The currently used
therapies for NP are poorly efficacious and suffer from serious side
effects, ranging from liver toxicity to addiction and personality
changes. In many cases, the therapy involves drugs developed for a
different condition that were incidentally found to reduce NP, e.g.,
biogenic amine reuptake inhibitors such as the antidepressant amitriptyline
or anticonvulsant drugs such as gabapentin. Opioids, which are effective
against acute pain, are not the first line of treatment for chronic
NP, both because of addiction liability and low efficacy.[3] Thus, there is an unsolved medical need for chronic
neuropathic pain treatment that necessitates the exploration of novel
mechanisms, such as purinergic therapy by agonists of adenosine receptors
(ARs), inhibitors of adenosine kinase, and modulators of nucleotidases.[4,5] The A3 subtype of the ARs (A3AR) is expressed
in low levels in many tissues and cell types, including neurons and
glial cells, and has recently become a promising target for treating
NP.[6−8]A3AR agonists, such as nucleosides 1–5 (Chart 1), are efficacious
in models of inflammatory disease, cancer, stroke, cardiac ischemia,
and other conditions.[9] Prototypical A3AR agonists, ribosides N6-(3-iodobenzyl)-5′-N-methylcarboxamidoadenosine (IB-MECA, 1) and
its 2-chloro analogue 2 and thioriboside 3 are efficacious in vivo.[10−12] Prototypical agonists 1 and 2 are advancing to phase II and III clinical trials
for psoriasis, rheumatoid arthritis, and hepatocellular carcinoma.[13,14] A3AR agonists 4 and 5 additionally
have a conformationally rigid ribose substitution consisting of a
bicyclo[3.1.0]hexane (methanocarba) ring system that maintains a receptor-preferred
North (N) conformation. A3AR agonists of general structure 6 furthermore contain a rigid C2-phenylethynyl
extension that enhances selectivity, especially in the (N)-methanocarba
series. Compounds 1, 2, and 4 were shown to be active in reducing or preventing the development
of mechanically- and chemotherapy-induced NP in mice and rats.[10] The specific example of 6a in which
Ar is 3,4-difluorophenyl was also shown to be effective in in vivo
models of NP.[15] These selective nucleosideA3AR agonists potently and dose dependently reduce chronic
NP and also augment the effects of commonly used agents for this condition,
such as opiates. A3AR agonists reduce the NP associated
with administration of various chemotherapeutic agents representing
three different mechanisms of anticancer action.[10,15,16]
Chart 1
Prototypical A3AR Agonists in
the Ribo (1, 2), Thioribo (3), and (N)-Methanocarba (4, 5) Series,
Including Design Features of New Derivatives As Indicated with General
Structure 6
Although agonists of the A1 and A2AARs also have analgesic properties, they additionally have potent
cardiovascular side effects such as changes in heart rate and blood
pressure,[4,17−19] which are not as strongly
associated with the activation of the A3AR.[20,21] Thus, we seek orally bioavailable and highly selective A3AR agonists that have activity against chronic NP of distinct etiologies.[10] We have approached this problem by designing
and synthesizing new analogues of our previously reported chemical
class of 2-alkynyl-(N)-methanocarba adenosine 5′-methyluronamides[22] that might display improved and more drug-like
physicochemical properties than previous agents. There are both peripheral
and central mechanistic components to the observed protection against
NP by A3AR agonists.[11] Thus,
the ability to cross the blood–brain barrier as well as oral
bioavailability would be desirable in a clinical candidate.The 2-phenylethynyl groups that we previously reported to enhance
the selectivity of (N)-methanocarba adenosine derivatives as A3AR agonists are the focus of this structure–activity
relationship (SAR) study.[15] The current
strategy is to expand structurally the family of A3AR agonists
for treatment of NP and other diseases. As shown in Chart 1, in this study ring structures appended to the
2-ethynyl group were varied to encompass diverse heterocyclic and
other aryl groups and cycloalkyl groups. The reference compound 6a is highly efficacious in reversing chronic NP,[6,22] but it has nonoptimal physicochemical properties (lipophilicity
and MW) for drug development. Therefore, a group frequently included
at the N6 position of A3AR
agonists, N6-(3-halobenzyl), was replaced
with a smaller N6-methyl group, which
we already demonstrated to maintain human (h) A3AR binding
affinity in this chemical series.[22] A beneficial
effect of the N6-methyl substitution was
to reduce the molecular weight to below 500, which brings the analogues
in closer compliance to Lipinski’s guidelines for bioavailable
compounds.[23] There was a cost associated
with this structural shift, i.e., a species difference in receptor
affinity, which was decreased at the mouse (m) A3AR in
comparison to the hA3AR.[11] Nevertheless,
when administered po in mice, these derivatives consistently displayed
in vivo activity reflective of A3AR activation, with varying
degrees of efficacy at a single dose.We have used an in vivo
phenotypic drug discovery (PDD) screen that reflects both pharmacokinetic
and pharmacodynamics factors to demonstrate oral bioavailability and
high efficacy of several of the newly synthesized nucleoside analogues.
The pharmaceutical industry is rediscovering the predictive value
of physiology-based PDD strategies.[24] The
initial screening used was the Bennett mouse model of chronic neuropathic
pain resulting from constriction injury (CCI) of the sciatic nerve,[25] in which the compound was administered by oral
gavage (po) rather than intraperitoneally (ip), as we reported in
earlier studies of A3AR agonists in the same model.[10] Although the expectation of A3AR
selectivity of the newly synthesized analogues was high based on existing
SAR, they were additionally subjected to measurement of their AR interactions.
Binding and functional assays at the heterologously expressed h and
m ARs were performed, as well as screening of selected compounds at
off-target sites.[26] The A3AR
is a G protein-coupled receptor (GPCR) of the rhodopsin-like family
A and as such is amenable to molecular modeling based on homology
to closely related GPCRs,[11,15] specifically the structures
of the agonist-bound active-like A2AAR.[27,28] Novel structures that were efficacious in vivo and bound potently
to the receptor were docked to an A3AR homology model.
Thus, in vitro pharmacology and molecular modeling were used to help
interpret the positive in vivo results obtained for promising analogues.
Results
The novel (N)-methanocarba adenosine analogues 14–18 and 20–38 (Table 1) were synthesized and tested in a phenotypic screen
as described below. Charged compounds were not included because they
might be impaired in the ability to cross the blood–brain barrier.[9] Related previously reported reference compounds[22] included in Table 1 are N6-(3-chlorobenzyl)-3,4-difluorophenyl 6a, N6-methyl-C2- halophenylethynyl 8–13 and simple
phenyl 7a, biphenyl 7b, and 2-pyridyl 19 analogues. The new nucleosides are all N6-methyl compounds, for which the C2
substituent consists of the following substituted ethynyl groups:
phenyl 14–18, nitrogen heterocycle 19–26, furan 27–30, thiophene 31–35, ferrocene
(Fe(C5H5)2) 36, and
cycloalkyl 37 and 38. For comparison with
the new analogues, structures and binding affinities of previously
reported potent A3AR agonists are provided.
Table 1
Structures and Binding Affinities of Newly Synthesized AR Agonists
(14–18 and 20–38) and Reference Compounds (6a–13 and 19)a
Binding in membranes
prepared from CHO or HEK293 (A2A only) cells stably expressing
one of three hAR subtypes. The binding affinity for hA1, A2A, and A3ARs was expressed as Ki values (n = 3–4), measured using
agonist radioligands [3H]N6-R-phenylisopropyladenosine 65, [3H]2-[p-(2-carboxyethyl)phenyl-ethylamino]-5′-N-ethylcarboxamido-adenosine 66, or [125I]N6-(4-amino-3-iodobenzyl)adenosine-5′-N-methyl-uronamide 67, respectively. A percent
in italics refers to inhibition of binding at 10 μM. Nonspecific
binding was determined using 68 (10 μM at hARs,
100 μM at mARs).
Compounds 6a–13 and 19 were reported
earlier in Tosh et al.[22]
Human, unless noted (m). Binding in
membranes prepared from HEK293 cells stably expressing the mA3AR. Radioligand used was [125I]N6-(4-amino-3-iodobenzyl)adenosine-5′-N-methyl-uronamide 67. The data (n =
3–4) are expressed as Ki values.
A percent in italics refers to inhibition of binding at 10 μM.
Binding in membranes
prepared from CHO or HEK293 (A2A only) cells stably expressing
one of three hAR subtypes. The binding affinity for hA1, A2A, and A3ARs was expressed as Ki values (n = 3–4), measured using
agonist radioligands [3H]N6-R-phenylisopropyladenosine 65, [3H]2-[p-(2-carboxyethyl)phenyl-ethylamino]-5′-N-ethylcarboxamido-adenosine 66, or [125I]N6-(4-amino-3-iodobenzyl)adenosine-5′-N-methyl-uronamide 67, respectively. A percent
in italics refers to inhibition of binding at 10 μM. Nonspecific
binding was determined using 68 (10 μM at hARs,
100 μM at mARs).Compounds 6a–13 and 19 were reported
earlier in Tosh et al.[22]Human, unless noted (m). Binding in
membranes prepared from HEK293 cells stably expressing the mA3AR. Radioligand used was [125I]N6-(4-amino-3-iodobenzyl)adenosine-5′-N-methyl-uronamide 67. The data (n =
3–4) are expressed as Ki values.
A percent in italics refers to inhibition of binding at 10 μM.The synthetic methods (Scheme 1) followed the route reported earlier starting with l-ribose.[11,22,29] 6-Chloro 5′-ethyl ester intermediate 39 was
treated with five equivalents of methylamine hydrochloride in the presence of triethylamine
followed by a 40% methylamine solution (aqueous) at room temperature
to provide intermediate 2-iodo 5′-methylamide 40 for the N6-methyl derivatives. Then, 40 was subjected to Sonogashira coupling with the appropriate
aryl- or cycloalkylacetylene in the presence of PdCl2(Ph3P)2, CuI, and triethylamine to give protected intermediates 41–63. Finally, hydrolysis of the 2′,3′-isopropylidene
protecting group afforded the nucleoside target compounds 14–18 and 20–38 for biological testing.
Scheme 1
Synthesis of N6-Methyl (N)-Methanocarba Derivatives
Synthesis of N6-Methyl (N)-Methanocarba Derivatives
Reagents: (i) MeNH2·HCl, Et3N, MeOH; (ii) 40% MeNH2, MeOH, rt; (iii) HC≡CR1, Pd(PPh3)2Cl2, CuI, Et3N, DMF, rt; (iv) 10% TFA, MeOH, 70 °C.The N6-methyl (N)-methanocarba
derivatives were tested in mice for the ability to reverse the development
of neuropathic pain in a standard model of CCI.[25] Each nucleoside was administered orally (po) at the time
peak pain was reached, i.e., on day 7 following constriction of the
sciatic nerve. Measurements of paw withdrawl threshold (value in g
increases with pain protection) were made between 30 min and 5 h post
drug. The results indicating maximal protective effect (Emax as a percentage of complete reversal at peak protection)
at a standard dose (3 μmol/kg, roughly 1.2–1.6 mg/kg)
and its duration (based on the efficacy remaining at 3 h) are presented
in Table 2, and time curves at three doses
for three selected compounds that achieved near maximal reversal of
NP are shown in Figure 1. However, previously
reported halogenated C2-phenylethynyl derivatives[22]8–12 did not
reach full reversal of NP (40–72% efficacy), but a 3,4-difluoro
analogue 13 was fully efficacious. Methoxyphenyl- (14–16, with the o-isomer 14 having the highest efficacy), 3-trifluoromethyl- 17, and 4-hydroxymethyl-phenyl 18 derivatives
did not exceed that range. All of the pyridyl derivatives (19–21) were of low efficacy (29–41%). A
2-(pyrimidin-2-yl)ethynyl analogue 22, 2-(pyrazin-2-yl)ethynyl
analogue 23, 2-(N-methylpyrazol-2-yl)ethynyl
analogue 26, 2-(fur-2-yl)ethynyl analogue 27, 2-(benzofur-2-yl)ethynyl analogue 30, 2-(thien-2-yl)ethynyl
analogue 32, 2-(5-chlorothien-2-yl)ethynyl derivative 33 and its 5-Br analogue 34, and an unusual organometallic
(ferrocene) derivative 36 were among the most efficacious
in the CCI model with Emax in the range
of 87–100%. This protection exceeded that produced by a previously
characterized A3AR agonist,[15,22] 2-(3,4-difluorophenylethynyl)-N6-3-chlorobenzyl derivative 6a administered
po. Thiazole analogue 35 was much less effective in vivo
than the structurally similar thiophene 32.
Table 2
Activity of Orally Administered AR Agonists (3 μmol/kg)
in CCI Model of Neuropathic Pain in Mice and Physicochemical Parameters
Effect
shown for ipsilateral hind paw; there is no effect on the contralateral
side.
calculated using ChemBioDraw,
version 13.0.
ND: not determined.
Figure 1
Protection
against hind paw allodynia in mice by N6-methyl derivatives 23, 27, and 33 at three doses (po) following CCI of the sciatic nerve. There was
no effect on the ipsilateral side (Figure S1,
Supporting Information).
Protection
against hind paw allodynia in mice by N6-methyl derivatives 23, 27, and 33 at three doses (po) following CCI of the sciatic nerve. There was
no effect on the ipsilateral side (Figure S1,
Supporting Information).Effect
shown for ipsilateral hind paw; there is no effect on the contralateral
side.calculated using ChemBioDraw,
version 13.0.ND: not determined.The duration was indicated
by the % protection remaining at the 3 h time point. The duration
of effect of 5-chlorothienyl derivative 33 and ferrocene
derivative 36 appeared to be longer than for the other
analogues, with approximately 80% protection remaining at 3 h. The
effects of compounds 30 and 34 were also
long lasting, with roughly half of the peak efficacy remaining at
3 h. Thus, on the basis of either in vivo Emax or duration, the most favorable of the new compounds for in vivo
application were 23 (Ki at
hA3AR, nM 1.8), 27 (0.6), 32 (0.6), 33 (0.7), 34 (0.4), and 36 (2.7).
According to the dose–response relationship in Figure 1, 33 (intermediate dose of 0.46 mg/kg
producing ∼80% reversal) was more potent in vivo than 23 and 27.The nucleoside derivatives were
secondarily tested in standard radioligand binding assays at three
hAR subtypes (Table 1) to confirm A3AR selectivity.[11,22] The hA1AR and hA3AR were stably expressed in CHO cells, and the hA2AAR was stably expressed in HEK293 cells. The Ki values at the hA3AR were in most cases in the
low nM range. At the hA1AR and hA2AAR, only
10–40% of binding inhibition was seen at 10 μM for all
of the tested (N)-methanocarba nucleosides. Thus, there was high hA3AR selectivity for the entire structural family. The most
efficacious derivatives in the in vivo assay, such as long-acting 33 and 36, were confirmed to display high selectivity
in binding with Ki values at the hA3AR of 0.70 and 2.68 nM, respectively. However, high A3AR affinity and selectivity alone were not sufficient to provide
full protection in the CCI assay; other analogues that were less efficacious
such as o-Cl-phenyl derivative 11 were
equally A3AR selective.Nevertheless, a comparison
of AR binding SAR was useful. A comparison of the binding affinities
of compounds 6a and 13 suggests that the
presence of an N6-methyl group in 13 is associated with preserved or increased selectivity for
the hA3AR. Compounds 14–16 are regioisomers, in which a methoxy group is moved to different
positions on the phenylethynyl ring, but there is little effect on
the subnanomolar hA3AR affinity and selectivity. Compounds 19–21 are regioisomers at the pyridylethynyl
group, but there is little effect on the hA3AR affinity.
Pyrazine derivatives 22–24 similarly
display at most a 2-fold difference in hA3AR binding affinity,
and pyrazole derivatives 25 and 26 are similar
in hA3AR affinity. Furyl 27–30 and thienyl 31–35 derivatives,
ferrocene derivative 36, and cycloalkyl analogues 37 and 38 also displayed only minor variation
of nanomolar hA3AR affinity.The mAR affinity of
selected compounds was measured in binding assays. The mA3AR affinity of this series of closely related N6-methyl congeners was typically >30 nM, i.e., reduced >30-fold
in comparison to the hA3AR affinity. In general, variation
of the affinity at mA3AR was not parallel to changes at
the hA3AR (Figure S1, Supporting Information). The unusual ferrocene derivative 36 was the most
potent among these analogues at the mA3AR with a Ki of 5.46 nM, while many other analogues had Ki values of 30–50 nM. Nevertheless, affinity
at the mA1AR and mA2AAR (single point determination
at 10 μM) was very weak, indicating that high A3AR
selectivity (>100-fold for 23, 27, 32, and 33; >1000-fold for 6a and 36) was still present in the mouse.Selected
compounds were examined for functional potency and efficacy at the
mA3AR in an assay of A3AR-induced inhibition
of the production of cyclic AMP in stably transfected HEK293 cells
(Figure 2).[22] The
tested compounds 23, 32, 33, and 36 were all full agonists at the mA3AR, with IC50 values ranging from 3.14 nM (36) to 60.1 nM (32). Activity in the inhibition of cyclic
AMP formation at the hA1AR and hA3AR was evaluated
for representative compounds 23 and 32,
which were shown to be potent, full agonists with functional selectivity
of roughly 10000-fold for the A3AR.
Figure 2
Functional agonism by
four selective A3AR agonists. (A–D) Activity of
compounds 23, 32, 33, and 36 in an assay of inhibition of forskolin-stimulated cyclic
AMP accumulation with HEK293 cells expressing the mA3AR.[11,22] Concentration–effect curve with reference full agonist 2 is included for comparison. Data are the mean ± SEM, n = 4–7. (E,F) Activity of compounds 23 and 32 in an assay of inhibition of forskolin-stimulated
cyclic AMP accumulation with CHO cells expressing the hA3AR.[11] EC50 values are 23, 1.46 ± 0.37 nM; 32, 0.42 ± 0.18
nM.
Functional agonism by
four selective A3AR agonists. (A–D) Activity of
compounds 23, 32, 33, and 36 in an assay of inhibition of forskolin-stimulated cyclic
AMP accumulation with HEK293 cells expressing the mA3AR.[11,22] Concentration–effect curve with reference full agonist 2 is included for comparison. Data are the mean ± SEM, n = 4–7. (E,F) Activity of compounds 23 and 32 in an assay of inhibition of forskolin-stimulated
cyclic AMP accumulation with CHO cells expressing the hA3AR.[11] EC50 values are 23, 1.46 ± 0.37 nM; 32, 0.42 ± 0.18
nM.Molecular modeling was used to
analyze the putative interactions of the distal cyclic groups appended
to the C2-ethynyl substitutent with the A3AR. The environment of receptor-bound C2-arylethynyl
and cycloalkylethynyl groups was explored by docking to A3AR homology models. We used our previously reported homology models
of the h and m A3ARs,[11,22] based on a
hybrid A2AAR-β2 adrenergic receptor template.
The hybrid template strategy that determined the outward shift of
the extracellular tip of TM2 with the creation of a larger pocket
was required to accommodate the rigid and extended C2 substituent of these derivatives, as previously described.[11,22] In docking selected compounds of the present series, a common binding
mode was obtained at both the h and m A3AR models, and
this mode featured all the key interactions found to anchor the adenine
and pseudosugar moieties of similar derivatives. As an example, Figure 3 shows the docking poses of compound 33, which displayed high affinity at both the hA3AR (0.70
nM) and mA3AR (36 nM), at the two receptors. The planar
bicyclic core formed a π–π stacking interaction
with a phenylalanine in the second extracellular loop (EL2) and two
hydrogen bonds with N6.55, while the methanocarba region formed a
hydrogen bonding network with T3.36, S7.42, and H7.43. The C2 terminal cyclic group was found to occupy a region close
to the extracellular environment in proximity of TM2, with tolerance
for many substitutions and steric bulk, consistent with previous findings.
Even though the residues in proximity of the terminal cyclic group
are different between the h and m A3ARs, a good accommodation
of all the different C2 substituents was found in
both cases. In the case of compound 33, the aryl group
at the C2 position is almost coplanar with the adenine
core. However, for other compounds bearing heterocyclic rings with
H-bonding donor or acceptor groups, the dihedral angle between the
rings can vary to allow formation of H-bonds with residues in EL2,
in particular with the backbone NH of Phe168 or with the side chain
of Gln167 at the hA3AR and with the backbone NH of Phe169
or with the side chain of His168 at the mA3AR.
Figure 3
Putative binding
modes of 2-(2-chlorothienylethynyl)-N6-methyl (N)-methanocarba derivative 33 (green carbons)
obtained after docking simulations: (A) at the hA3AR, (B)
at the mA3AR. Side chains of some amino acids important
for ligand recognition are highlighted. H-Bonds are pictured as dotted
lines. Hydrogen atoms are not displayed. The corresponding residue
numbers of the hA3AR using the Ballesteros–Weinstein
notation[46] or locations are V72, 2.64;
T94, 3.36; Q167, EL2; F168, EL2; W243, 6.48; N250, 6.55; Y265, 7.36;
S271, 7.42; H272, 7.43.
Putative binding
modes of 2-(2-chlorothienylethynyl)-N6-methyl (N)-methanocarba derivative 33 (green carbons)
obtained after docking simulations: (A) at the hA3AR, (B)
at the mA3AR. Side chains of some amino acids important
for ligand recognition are highlighted. H-Bonds are pictured as dotted
lines. Hydrogen atoms are not displayed. The corresponding residue
numbers of the hA3AR using the Ballesteros–Weinstein
notation[46] or locations are V72, 2.64;
T94, 3.36; Q167, EL2; F168, EL2; W243, 6.48; N250, 6.55; Y265, 7.36;
S271, 7.42; H272, 7.43.Interactions with potential off-target receptor sites, which
could lead to side effects, were measured for the most promising leads
from the in vivo screen. Binding of seven of the most promising N6-methyl compounds, 23, 26, 27, 32–34, and 36, to various possible off-target sites (mostly GPCRs) was
assayed in a broad screen of binding activity using cloned human or
rodent cDNAs for CNS receptors and ion channels. This screening was
provided by the National Institute of Mental Health Psychoactive Drug
Screening Program (NIMH-PDSP).[26] Data for
compounds 1, 6a, and 13, reported
elsewhere, are also provided for comparison.[30] Screening results indicated that various analogues displayed significant
in vitro binding to other sites in the micromolar range, including
biogenic amine receptors. In 44 assays of off-target sites (Supporting Information), compounds 13, 23, and 32 at 10 μM inhibited binding
by >30% at only a few sites. Various analogues showed significant
binding in the μM range at M2, 5HT2A, β3, 5HT2B, 5HT2C (except for diF-phenylethynyl),
and α2C receptors and at the translocator protein
(TSPO), also known as the peripheral benzodiazepine receptor (PBR).
The reference agonist 1 showed interactions (Ki in μM) with 5HT2B (1.08)
and 5HT2C (5.42) receptors. Thus, some of the derivatives
have potential off-target activities that could present a liability
for drug development. More off-target interaction was observed in
the (N)-methanocarba series when an N6-3-chlorobenzyl group was present, i.e., 6a;[30] thus, the switch to N6-methyl was beneficial from this perspective. Compounds 26 and 27 were found to be relatively free of off-target
receptor effects in the PDSP screening. Compound 33 was
largely free of off-target receptor effects, except at TSPO and σ1
and σ2 receptors. The SAR patterns of the broader chemical series
at other GPCRs has been analyzed with the aid of molecular modeling.[30]In vitro stability measurements in physiological
solutions were performed on selected compounds for comparison to the
same parameters determined for 6a to be reported elsewhere
(Table 3). Compound 6a was orally
active in vivo in reducing chronic NP, although its physicochemical
properties are not optimal (cLogP of 4.15, total polar surface area
of 122 Å2, and molecular weight of 565 D). Thus, it
was considered advantageous to find other smaller and less hydrophobic
A3AR agonists that were fully efficacious in vivo against
NP. The physicochemical properties of several analogues are predictive
of greater drug-like properties in vivo. For example, compound 33 that has a prolonged duration of action displays a more
favorable cLogP of 2.17 and molecular weight of 459 D, but the total
polar surface area was similar to 6a. Nevertheless, some
compounds clearly in the favored ranges of physicochemical parameters
were not among the most efficacious in vivo. Thus, the in vivo effects
are not ascribable to a simple combination of parameters. The solubility
of pyrazinyl 23 and furyl 27 derivatives
was greatly increased (>0.2 mg/mL) and plasma protein binding in
three species diminished (24–61% free) while the in vivo efficacy
of this analogue was maintained.
Table 3
In Vitro Stability
Parameters for Selected Nucleoside Derivatives
compound
test
23
27
33
34
36
aq solubility (pH 7.4, μg/mL)a
>208
>202
16.8 ± 1.1
15.6 ± 0.9
14.5 ± 1.0
stability
in simulated fluids (t1/2, min)
gastric (pH 1.6)
>480
>480
>480
>480
46.5
intestinal (pH 6.5)
>480
>480
>480
>480
174
% unbound in plasma
human
61.2
24.2
6.22
2.67
7.00
rat
57.5
40.5
5.91
4.04
6.32
mouse
59.1
50.2
6.40
2.75
4.85
inhibition of 5 CYP isozymes (IC50, μM)
>10
>10
>10
>7b
>9c
stability in liver microsomes (t1/2, min)
humand
236
145
230
205
3.66
rat
>145
140
128
91
6.64
mouse
>145
141
143
96
1.98
mean (±SD, where given) for n = 3.
% inhibition at 10 μM 34: 1A2, 15.0; 2C9, 24.2; 2C19, 34.0; 2D6, 57.5 (IC50 7.4
μM); 3A4, 3.1 (average of n = 2).
% inhibition at 10 μM 36: 1A2, 30.5; 2C9, 17.2; 2C19, 18.1; 2D6, 20.5; 3A4, 51.6 (IC50 9.4 μM), (average of n = 2).
CLint values (μL/min/mg
protein) in human liver microsomes: 23, 2.99; 27, 3.09; 33, 3.69; 34, 3.38.
mean (±SD, where given) for n = 3.% inhibition at 10 μM 34: 1A2, 15.0; 2C9, 24.2; 2C19, 34.0; 2D6, 57.5 (IC50 7.4
μM); 3A4, 3.1 (average of n = 2).% inhibition at 10 μM 36: 1A2, 30.5; 2C9, 17.2; 2C19, 18.1; 2D6, 20.5; 3A4, 51.6 (IC50 9.4 μM), (average of n = 2).CLint values (μL/min/mg
protein) in human liver microsomes: 23, 2.99; 27, 3.09; 33, 3.69; 34, 3.38.Stability tests (Table 3) indicated that 23, 27, 33, and 34 are stable in liver microsomes
of three species (human, rat, and mouse) and in simulated body fluids
(gastric, intestinal), but 36 is rapidly degraded (t1/2 in microsomes = 2–7 min). Therefore,
it is likely that the long-lasting protective effects of 36 in the phenotypic screen are from an unidentified metabolite that
forms in vivo. There was an unfavorable CYP450 inhibition profile
for bromothienyl derivative 34, with a measurable IC50 value of 7.4 μM for the 2D6 isozyme. Compound 34 inhibited the 3A4 isozyme with an IC50 value
of 9.4 μM. Compounds 23, 27, and 33 were shown not to be substrates for P-glycoprotein in a
study of bidirectional permeability in a CACO-2 cell monolayer (Supporting Information). 27 and 33 displayed moderate apical to basal permeability, and 23 displayed
low permeability. Selected compounds were examined by the PDSP for
functional inhibition of hERG K+ channels (% inhibition
at 10 μM or IC50): 6a (12.2 μM), 13 (27 μM), 26 (28%), 27 (21%), 32 (11.5 μM), and 33 (12.9 μM). Thus,
the hA3AR binding affinity of these analogues exceeds hERG
inhibition by typically 10,000-fold.
Discussion
Phenotypic
screening is making a resurgence as a strategy in drug discovery.[31] Although our approach is target-based at the
outset, i.e., we have narrowed the structural scope based on new compounds
consistent with a well developed SAR at the A3AR, we have
subjected the next stage of refinement to an in vivo screen that combines
multiple components of pharmacokinetics and possible interaction with
multiple mechanisms as well as the main mechanism of AR activation.
We have administered the nucleosides orally, which is the preferred
route for a chronic pain drug.We have recently reported that
A3AR agonists including 6a are more potent
than currently used analgesics (gabapentin, amitriptyline, morphine);[10] in contrast to opioids, these do not cause tolerance
upon repeated administration and are not rewarding.[6,10] The
mechanisms of action whereby A3AR agonists block and reverse
neuropathic pain states do not rely upon an endogenous opioid or endocannabinoid
pathway[6,10] but do rely upon activation of A3AR found in spinal cord dorsal horn and at supraspinal sites (i.e.,
in the RVM) to engage descending inhibitory noradrenergic and serotonergic
bulbospinal systems, leading to reduced spinal neuronal hyperexcitability.[6] It is noteworthy that A3AR attenuates
neuropathic pain at least in part by reducing neuro-glia dysfunction
and downstream neuroinflammatory events that are critical to the development
of neuronal excitability associated with central sensitization, inhibition
of spinal glial cell activation and redox-sensitive signaling transduction
pathways (MAPK kinases and NFκB) leading to overall reduction
in proinflammatory cytokines (TNF and IL1β but increased levels
of the potent anti-inflammatory and neuroprotective cytokine, IL-10).[15,16] The discovery of highly selective A3AR agonist such as
those described in this paper provides a necessary pharmacological
tool to enable our mechanistic understanding of the roles of the A3AR in chronic pain states and therefore the impact of targeting
this receptor to alleviate chronic pain and human suffering, thus
addressing a huge medical need with major socioeconomic consequences.The in vivo activities of various N6-methyl derivatives were compared and correlated with structure,
and several preferred candidates have been identified. The unsubstituted C2-phenylethynyl analogue 7a displayed low
efficacy (44% of full reversal at peak effect) in the CCI model of
chronic NP. The extended biphenyl derivative 7b also
displayed less than full efficacy. Aryl halogenation is a possible
approach to lengthening the in vivo duration of action by preventing
oxidation by cytochrome P450 enzymes in the liver.[32] However, the monohalophenylethynyl analogues 8–12 were less than fully efficacious, and the
3,4-difluorophenyl group of the more efficacious 13 resulted
in a shorter peak duration in comparison to reference compound 6a. Substitution of the phenyl ring with methoxy improved
the maximal effect (64%) but only in the ortho position in 14. All positions of nitrogen in the pyridyl analogues 19, 20, and 21 resulted in the same or lower
efficacy than the phenyl analogue 7a. However, dinitrogen
substitution in pyrazine derivative 23 increased the
efficacy to ∼100%, but the efficacy of isomers containing nitrogen
at different positions in 22 and 24 resulted
in less than full efficacy. A pyrazine moiety is found in many natural
products and drug-like molecules such as the diuretic amiloride.[33] 2-Furyl 27 and 2-thienyl 32 analogues were fully efficacious, with a ∼3 h duration
of action. Curiously, duration and efficacy of a 3-thienyl analogue 31 was considerably lower. Addition of 5-chloro to the 2-thienyl
analogue 32, resulting in compound 33, prolonged
the duration of action while maintaining full efficacy, and 5-bromothienyl
substitution in 34 was also well tolerated in vivo and
in binding (Ki 0.4 nM). A similar 5-chlorothiophene-2-carboxamide
moiety was found to be relatively metabolically stable in a widely
used anticoagulant Rivaroxaban.[34]The ferrocene derivative 36 was fully efficacious, but
the toxicological properties of this organometallic compound were
not tested. Other ferrocene compounds, such as anticancer derivatives
of tamoxifen, were found to be biocompatible and not highly toxic.[35] Thus, 36 was considered to be a
candidate for further biological evaluation. A class of organometallic
(ruthenium) heterocyclic derivatives has already been reported as
A3AR antagonists.[36] Cycloalkyl
analogues 37 and 38 displayed less than
full efficacy in vivo (60–70%). Among mono- and dihalo-substituted
analogues, the 3,4-difluoro analogue 13, bearing the
same C2 substituent as reference compound 6a, was the most efficacious.Thus, the effects of introducing
a 2-alkynyl group in adenosine (riboside) derivatives on their AR
affinity and selectivity have been variable.[37] In some cases, selectivity for the A3AR has been achieved.
In the present series of nucleoside derivatives that contain several
sources of conformational rigidity, the nM affinity and nearly complete
specificity for the A3AR is maintained for a wide variety
of cyclic groups attached to the 2-ethynyl moiety. Docking studies
confirmed that the A3AR has sufficient plasticity in the
region around the extracellular tip of TM2 to accommodate a wide range
of steric and electronic character, allowing the rest of the ligand
molecule to strongly interact with all the key residues important
for AR binding. Thus, we have extended previous 2-phenylethynyl series[22] to provide a great breadth of substitution that
preserves target specificity. In summary, the analogues that reached
nearly full efficacy in reversing NP in vivo were 13, 22, 23, 26, 27, 32, 33, 34, and 36.
Thus, both 2-thienyl and 2-furyl derivatives are among the most efficacious
analogues in vivo.One of the major reasons for failure of a
variety of AR ligands on a clinical path was low bioavailabily.[19] Therefore, there was a need to optimize physicochemical
characteristics that are predictive of bioavailability. The smaller
molecular weight and lower hydrophobicity of the N6-methyl analogues in comparison to the reference A3AR agonist 6a are consistent with drug-like properties
in vivo. Compound 6a suffers from high hydrophobicity,
leading to low aqueous solubility. Pyrazine derivative 23 is much more polar than 6a and consequently more water-soluble
and less bound to plasma proteins, and it displays good efficacy in
the CCI model. Furan 27 and 2-chlorothiophene 33 derivatives are fully efficacious in CCI model and display a 5-fold
higher hA3AR affinity than 6a. Compound 33 had a favorable combination of physicochemical parameters
within this group of nucleosides. Moreover, compound 27 completely lacks off-target interactions at 10 μM and has
a relatively low molecular weight (408), predictive of increased bioavailability,
and possibly CNS entry. Thus, we have expanded the structural range
of orally active adenosine derivatives for the treatment of chronic
pain. The most efficacious compounds in vivo had a cLogP of ≤2.3
and a tPSA of ≤131 Å2. However, there appears
to be no direct correlation between the in vivo efficacy against NP
and the three physicochemical parameters listed in Table 3. A molecular weight of 526 in potentially short-lived
ferrocene derivative 36 still allowed full efficacy,
as did a tPSA of >120 (e.g., 23), which is considered
the upper limit for molecules expected to readily cross the blood
brain barrier.[23]Three 2-thienyl
derivatives were among the most efficacious and long lasting in vivo.
The in vivo metabolism of thiophene derivatives has been studied.[38] Cytochrome P450s may catalyze the oxidation
of thiophene compounds with the simultaneous formation of two reactive
intermediates, a thiophene-S-oxide and a thiophene
epoxide. However, some 5-halothiophene derivatives demonstrate greater
stability in vivo.[34] Strikingly, in this
study, the in vivo pharmacological effects of 5-substituted thiophene
derivatives 33 and 34 were among the most
prolonged. These compounds were sufficiently stable in vivo to provide
an extended duration of action compared to the majority of other analogues,
suggesting that rapid degradation is not occurring in these derivatives.
Both compounds were stable in liver microsomes, but compound 34 inhibited a CYP450 isozyme in the μM range; therefore, 33 appears to be the leading candidate molecule arising from
this study.
Conclusions
The translation of AR agonists into therapeutic
products has been impeded by efficacy, bioavailability, and side effect
issues.[19] This study progresses beyond
the most common initial screen of binding selectivity alone to some
of parameters that are predictive of derisking in pharmaceutical development
such as oral bioactivity.We have modified the C2-arylethynyl group of our previously reported A3AR agonists
with different rings, including both substituted benzene rings and
small heterocyclic rings like thiophene. These are mostly in the N6-methyl series, which has reduced affinity
at the mouseA3AR but may be advantageous because of favorable
pharmacokinetics over the N6-benzyl series
due to a lower MW and lower log P. Five-membered
heteroring derivatives 27 and 32–34 were fully efficacious in reducing neuropathic pain in
vivo, suggesting structural consistency. An unusual organometallic
derivative 36 was among those compounds showing a prolonged
duration of action that would not have been predicted from the binding
affinity alone, but this compound was unstable under physiological
conditions. The most promising fully efficacious analogues in this
study, with respect to aqueous solubility and absence of off-target
sites, were pyrazinyl 23 and furyl 27 derivatives.
5-Chlorothienyl derivative 33 had a favorable balance
of high and prolonged efficacy, predicted in vivo stability, and few
off-target interactions. Measuring the potential off-target effects,
such as interaction with α-adrenergic receptors, provides another
means of identifying possible liabilities early in the drug discovery
process. The lead compounds discovered here are now suitable for more
extensive in vivo testing, including pharmacokinetic and toxicity
evaluation. On the basis of these leads, we hope to identify other
highly efficacious analogues with in vivo activity using phenotypic
screening.
Experimental Section
Chemical Synthesis
Materials
and Instrumentation
All reagents and solvents were purchased
from Sigma-Aldrich (St. Louis, MO). 1H NMR spectra were
obtained with a Bruker 400 spectrometer using CDCl3 and
CD3OD as solvents. Chemical shifts are expressed in δ
values (ppm) with tetramethylsilane (δ 0.00) for CDCl3 and water (δ 3.30) for CD3OD. TLC analysis was
carried out on glass sheets precoated with silica gel F254 (0.2 mm)
from Aldrich. All the final sulfonate nucleoside compounds were purified
by HPLC with a Luna 5 μmRP-C18(2) semipreparative column (250
mm × 10.0 mm; Phenomenex, Torrance, CA) and using the following
conditions: flow rate of 2 mL/min, 10 mM trifluoroacetic acid–water
(TFA–H2O)–CH3CN from 80:20 to
30:70 in 20–40 min. The purity of final nucleoside derivatives
was checked using a Hewlett–Packard 1100 HPLC equipped with
a Zorbax SB-Aq 5 μm analytical column (50 mm × 4.6 mm;
Agilent Technologies Inc., Palo Alto, CA). Mobile phase: linear gradient
solvent system, 5 mM TBAP (tetrabutylammonium dihydrogen phosphate)–CH3CN from 80:20 to 0:100 in 13 min; the flow rate was 0.5 mL/min.
Peaks were detected by UV absorption with a diode array detector at
230, 254, and 280 nm. All derivatives tested for biological activity
showed >95% purity by HPLC analysis (detection at 254 nm). Low-resolution
mass spectrometry was performed with a JEOL SX102 spectrometer with
6 kV Xe atoms, following desorption from a glycerol matrix or on an
Agilent LC/MS 1100 MSD with a Waters (Milford, MA) Atlantis C18 column.
High resolution mass spectroscopic (HRMS) measurements were performed
on a proteomics optimized Q-TOF-2 (Micromass-Waters) using external
calibration with polyalanine, unless noted. Observed mass accuracies
are those expected based on known performance of the instrument as
well as trends in masses of standard compounds observed at intervals
during the series of measurements. Reported masses are observed masses
uncorrected for this time-dependent drift in mass accuracy. Compound 40 was prepared as reported.[22] All of
the monosubsituted alkyne intermediates were purchased from Sigma-Aldrich
(St. Louis, MO), Small Molecules, Inc. (Hoboken, NJ), Anichem (North
Brunswick, NJ), PharmaBlock, Inc. (Sunnyvale, CA), Frontier Scientific
(Logan, UT), and Tractus (Perrineville, NJ).
PdCl2(PPh3)2 (6.08 mg,
0.02 mmol), CuI (1.0 mg, 0.005 mmol), 2-ethynylpyrimidine (27.1 mg,
0.26 mmol), and triethylamine (0.06 mL, 0.43 mmol) were added to a
solution of compound 40 (21 mg, 0.04 mmol) in anhydrous
DMF (1 mL), and the mixture stirred at room temperature overnight.
Solvent was evaporated under vacuum, and the residue was roughly purified
on flash silica gel column chromatography. The resulting compound
was dissolved in MeOH (2 mL) and 10% trifluoroacetic acid (2 mL) and
heated at 70 °C for 5 h. Solvent was evaporated under vacuum,
and the residue was purified on flash silica gel column chromatography
(CH2Cl2:MeOH = 25:1) to give the compound 22 (12.2 mg, 67%) as syrup. 1H NMR (CD3OD, 400 MHz) δ 8.86 (d, J = 5.2 Hz, 2H), 8.14
(s, 1H), 7.53 (t, J = 5.2 Hz, 1H), 5.17 (d, J = 6.8 Hz, 1H), 4.92 (s, 1H), 4.6 (d, J = 6.4 Hz, 1H), 3.14 (br s, 3H), 2.86 (s, 3H), 2.11–2.07 (m,
1H), 1.84 (t, J = 5.2 Hz, 1H), 1.42–1.39 (m,
1H). HRMS calculated for C20H21N8O3 (M + H)+, 421.1737; found, 421.1732.
A solution of compound 40 (31
mg, 0.06 mmol) in methanol (3 mL) and 10% trifluoromethanesulfonic
acid (2 mL) was heated at 70 °C for 5 h. Solvent was evaporated
under vacuum, and the residue was purified on flash silica gel column
chromatography (CH2Cl2:MeOH = 25:1) to give
the isopropylidene-deblocked derivative (27 mg, 95%) as syrup. PdCl2(PPh3)2 (8.5 mg, 0.012 mmol), CuI (1.1
mg, 0.006 mmol), ethynylferrocene (76.6 mg, 0.36 mmol), and triethylamine
(0.08 mL, 0.6 mmol) were added to a solution of the obtained compound
(27 mg, 0.06 mmol) in anhydrous DMF (1.2 mL), and the mixture stirred
at room temperature overnight. Solvent was evaporated under vacuum,
and the residue was purified on flash silica gel column chromatography
(CH2Cl2:MeOH = 30:1) to give the compound 36 (29 mg, 86%) as light-yellow syrup. 1H NMR (CD3OD, 400 MHz) δ 8.10 (s, 1H), 5.01 (d, J = 6.4 Hz, 1H), 4.89 (s, 1H), 4.63 (s, 2H), 4.40 (s,2H), 4.31 (s,
6H), 4.01(d, J = 6.4 Hz, 1H), 3.15 (br s, 3H), 2.88
(s, 3H), 2.13–2.10 (m, 1H), 1.91 (t, J = 4.8
Hz, 1H), 1.42–1.38 (m, 1H). HRMS calculated for C26H27N6O3Fe (M + H)+, 527.1489;
found, 527.1489.
Previously
published homology models of the hA3AR and mA3AR,[11] built on the basis of a hybrid template
structure using the homology modeling tool implemented in the MOE
suite,[39] were used in this study. To build
these models, an agonist-bound hA2AAR crystal structure
(PDB code 3QAK)[27] was used as a template for the entire
A3AR structure except for the extracellular terminus of
TM2 (residues from Val63 to Ser73 at the hA3AR and from
Val64 to Ser74 at the mA3AR) and EL1 (residues from Leu74
to Tyr81 at the hA3AR and from Leu75 to Tyr82 at the mA3AR). The X-ray structure of the hβ2 adrenergic
receptor in complex with the Gs protein (PDB code 3SN6),[40] after superimposition with the hA2AAR crystal
structure, was used as template to build the extracellular terminus
of TM2. No structural template was used for the modeling of EL1. Details
of the modeling procedure have been previously described.[11,22]
Molecular Docking of (N)-Methanocarba Derivatives at A3AR Models
Structures of compounds were built and prepared
for docking using the build panel and the LigPrep panel implemented
in the Schrödinger suite.[41] Molecular
docking of the ligands at the A3AR models was performed
by means of the Glide[42] package part of
the Schrödinger suite. The docking site was defined using key
residues in the binding pocket of the A3AR models, namely
Phe (EL2), Asn (6.55), Trp (6.48), and His (7.43), and a 20 Å
× 20 Å × 20 Å box was centered on these residues.
Docking of ligands was performed in the rigid binding site using the
XP (extra precision) procedure. The top scoring docking conformations
of each ligand were subjected to visual inspection and analysis of
protein–ligand interactions to select the final binding conformations.
Radioligand Binding Studies
[3H]R-N6-Phenylisopropyladenosine (65, [3H]R-PIA, 63 Ci/mmol), [3H](2-[p-(2-carboxyethyl)phenyl-ethylamino]-5′-N-ethylcarboxamido-adenosine),
(66, [3H]CGS21680, 40.5 Ci/mmol), and [125I]N6-(4-amino-3-iodobenzyl)adenosine-5′-N-methyluronamide (67, [125I]I-AB-MECA,
2200 Ci/mmol) were purchased from Perkin–Elmer Life and Analytical
Science (Boston, MA). Test compounds were prepared as 5 mM stock solutions
in DMSO and stored frozen. Pharmacological standards 2 (A3AR agonist), adenosine-5′-N-ethylcarboxamide (68, NECA, nonselective AR agonist),
and 2-chloro-N6-cyclopentyladenosine (69, CCPA, A1AR agonist) were purchased from Tocris
R&D Systems (Minneapolis, MN).
Cell Culture and Membrane
Preparation
CHO cells stably expressing the recombinant hA1 and hA3ARs and HEK293 cells stably expressing
the hA2AAR were cultured in Dulbecco’s Modified
Eagle Medium (DMEM) and F12 (1:1) supplemented with 10% fetal bovine
serum, 100 units/mL penicillin, 100 μg/mL streptomycin, and 2 μmol/mL glutamine. In addition, 800
μg/mL Geneticin was added to the A2A media, while
500 μg/mL hygromycin was added to the A1 and A3 media. After harvesting, cells were homogenized and suspended
in PBS. The suspension was homogenized and was then centrifuged at
1000g for 10 min. The pellet was discarded, and the
suspension was recentrifuged at 20000g for 60 min
at 4 °C. The resultant pellets were resuspended in Tris buffer,
incubated with adenosine deaminase (3 units/mL) for 30 min at 37 °C.
The suspension was homogenized with an electric homogenizer for 10
s, pipetted into 1 mL vials, and then stored at −80 °C
until the binding experiments. The protein concentration was measured
using the BCA Protein Assay Kit from Pierce Biotechnology, Inc. (Rockford,
IL).[43]
Binding Assays
Into each tube in the binding assay was added 50 μL of increasing
concentrations of the test ligand in Tris-HCl buffer (50 mM, pH 7.5)
containing 10 mM MgCl2, 50 μL of the appropriate
agonist radioligand, and finally 100 μL of membrane suspension.
For the A1AR (22 μg of protein/tube), the radioligand
used was [3H]65 (final concentration of 3.5
nM). For the A2AAR (20 μg/tube), the radioligand
used was [3H]66 (10 nM). For the A3AR (21 μg/tube), the radioligand used was [125I]67 (0.34 nM). Nonspecific binding was determined using a final
concentration of 10 μM 68 diluted with the buffer.
The mixtures were incubated at 25 °C for 60 min in a shaking
water bath. Binding reactions were terminated by filtration through
Brandel GF/B filters under a reduced pressure using a M-24 cell harvester
(Brandel, Gaithersburg, MD). Filters were washed three times with
3 mL of 50 mM ice-cold Tris-HCl buffer (pH 7.5). Filters for A1 and A2AAR binding were placed in scintillation
vials containing 5 mL of Hydrofluor scintillation buffer and counted
using a PerkinElmer liquid scintillation analyzer (Tri-Carb 2810TR).
Filters for A3AR binding were counted using a Packard Cobra
II γ-counter. The Ki values were
determined using GraphPad Prism for all assays.Similar competition
binding assays were conducted using HEK293 cell membranes expressing
mARs using [125I]67 to label A1 or A3ARs and [3H]65 to label
A2AARs. IC50 values were converted to Ki values as described.[44] Nonspecific binding was determined in the presence of 100 μM 68.
Cyclic AMP Accumulation Assay
Cyclic
AMP assays were conducted with HEK293 cells expressing the mA3AR. HEK293 cells were detached from cell culture plates, resuspended
in serum-free DMEM containing 25 mM HEPES (pH 7.4), 1 unit/mL adenosine
deaminase, 4-(3-butoxy-4-methoxyphenyl)methyl-2-imidazolidone (Tocris,
Ro 20,1724, 20 μM) and 300 nM 8-[4-[4-(4-chlorophenzyl)piperazide-1-sulfonyl)phenyl]]-1-propylxanthine
(Tocris, PSB603, 300 nM, to inhibit A2BARs expressed endogenously
in HEK293 cells), and then transferred to polypropylene tubes (2 ×
105 cells/tube). The cells were coincubated with forskolin
(10 μM) and AR ligands for 15 min at 37 °C with shaking,
after which the assays were terminated by adding 500 μL of 1
N HCl. The lysates were centrifuged at 4000g for
10 min. The cyclic AMP concentration was determined in the supernatants
using a competitive binding assay, as previously described.[45] EC50 and Emax values were calculated by fitting the data to E = Emin + (Emax – Emin)/(1 + 10).
In Vivo Studies of Neuropathic
Pain
Methods are the same as those reported and are briefly
summarized here.[10,11]
Experimental Animals
Male CD-1 mice (25–30 g) from Harlan (Indianapolis, IN)
were housed 4–5 (for mice) per cage in a controlled environment
(12 h light/dark cycles) with food and water available ad libitum.
Experiments were performed in accordance with International Association
for the Study of Pain, NIH guidelines on laboratory animal welfare,
and Saint Louis University Institutional Animal Care and Use Committee
recommendations. Experimenters were blinded to treatment conditions
in all experiments.
CCI Model of Neuropathic Pain
CCI
to the sciatic nerve of the left hind leg in mice was performed under
general anesthesia using the well characterized Bennett model.[25] Briefly, mice (weighing 25–30 g at the
time of surgery) were anesthetized with 3% isoflurane/100% O2 inhalation and maintained on 2% isoflurane/100% O2 for
the duration of surgery. The left thigh was shaved and scrubbed with
Nolvasan (Zoetis, Madison, NJ), and a small incision (1–1.5
cm in length) was made in the middle of the lateral aspect of the
left thigh to expose the sciatic nerve. The nerve was loosely ligated
around the entire diameter of the nerve at three distinct sites (spaced
1 mm apart) using silk sutures (6.0). The surgical site was closed
with a single muscle suture and a skin clip. Pilot studies established
that under our experimental conditions peak mechano-allodynia develops
by D5–D7 following CCI. Test substances or their vehicles were
administered as 3 μmol/kg doses given by gavage (0.2 mL po)
at peak mechano-allodynia (D7). The vehicle used consisted of 10%
DMSO in 0.5% methylcellulose (diluted from a 5 mM stock solution in
DMSO). Methylcellulose (lot no. 021M0067V) was obtained from Sigma
viscosity 400 cP and prepared in sterile distilled water (UPS).
Statistical Analysis for in Vivo Experiments
Data are expressed
as mean ± SEM for n animals. Behavioral data
were analyzed by two-way ANOVA with Bonferroni comparisons. Significant
differences were defined at a P < 0.05. All statistical
analysis was performed using GraphPad Prism (v5.03, GraphPad Software,
Inc., San Diego, CA).
Binding to Off-Target Sites
Ki determinations and binding profiles in a broad
screen of receptors and channels were generously provided by the National
Institute of Mental Health’s Psychoactive Drug Screening Program,
contract no. HHSN-271-2008-00025-C (NIMH PDSP). The NIMH PDSP is Directed
by Bryan L. Roth MD, Ph.D. at the University of North Carolina at
Chapel Hill and Project Officer Jamie Driscol at NIMH, Bethesda MD,
USA. For experimental details, please refer to the PDSP web site http://pdsp.med.unc.edu/ and click on “Binding Assay”
or “Functional Assay” on the menu bar.
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