Literature DB >> 25419263

Capture of Fluorescence Decay Times by Flow Cytometry.

Jessica P Houston1, Mark A Naivar2, Patrick Jenkins1, James P Freyer3.   

Abstract

In flow cytometry, the fluorescence decay time of an excitable species has been largely underutilized and is not likely found as a standard parameter on any imaging cytometer, sorting, or analyzing system. Most cytometers lack fluorescence lifetime hardware mainly owing to two central issues. Foremost, research and development with lifetime techniques has lacked proper exploitation of modern laser systems, data acquisition boards, and signal processing techniques. Secondly, a lack of enthusiasm for fluorescence lifetime applications in cells and with bead-based assays has persisted among the greater cytometry community. In this unit, we describe new approaches that address these issues and demonstrate the simplicity of digitally acquiring fluorescence relaxation rates in flow. The unit is divided into protocol and commentary sections in order to provide a most comprehensive discourse on acquiring the fluorescence lifetime with frequency-domain methods. The unit covers (i) standard fluorescence lifetime acquisition (protocol-based) with frequency-modulated laser excitation, (ii) digital frequency-domain cytometry analyses, and (iii) interfacing fluorescence lifetime measurements onto sorting systems. Within the unit is also a discussion on how digital methods are used for aliasing in order to harness higher frequency ranges. Also, a final discussion is provided on heterodyning and processing of waveforms for multi-exponential decay extraction.

Entities:  

Keywords:  digital data systems; flow cytometry; fluorescence decay kinetics; fluorescence lifetime; frequency-domain; phase-sensitive detection

Year:  2012        PMID: 25419263      PMCID: PMC4240630          DOI: 10.1002/0471142956.cy0125s59

Source DB:  PubMed          Journal:  Curr Protoc Cytom        ISSN: 1934-9297


  16 in total

1.  Open, reconfigurable cytometric acquisition system: ORCAS.

Authors:  Mark A Naivar; Jimmie D Parson; Mark E Wilder; Robert C Habbersett; Bruce S Edwards; Larry Sklar; John P Nolan; Steven W Graves; John C Martin; James H Jett; James P Freyer
Journal:  Cytometry A       Date:  2007-11       Impact factor: 4.355

2.  Time-resolved fluorescence measurements.

Authors:  J A Steinkamp
Journal:  Curr Protoc Cytom       Date:  2001-05

3.  Differential effects of deuterium oxide on the fluorescence lifetimes and intensities of dyes with different modes of binding to DNA.

Authors:  B L Sailer; A J Nastasi; J G Valdez; J A Steinkamp; H A Crissman
Journal:  J Histochem Cytochem       Date:  1997-02       Impact factor: 2.479

4.  Interactions of intercalating fluorochromes with DNA analyzed by conventional and fluorescence lifetime flow cytometry utilizing deuterium oxide.

Authors:  B L Sailer; A J Nastasi; J G Valdez; J A Steinkamp; H A Crissman
Journal:  Cytometry       Date:  1996-10-01

5.  Phase-resolved fluorescence lifetime measurements for flow cytometry.

Authors:  B G Pinsky; J J Ladasky; J R Lakowicz; K Berndt; R A Hoffman
Journal:  Cytometry       Date:  1993

6.  Simultaneous dual-frequency phase-sensitive flow cytometric measurements for rapid identification of heterogeneous fluorescence decays in fluorochrome-labeled cells and particles.

Authors:  C Deka; L S Cram; R Habbersett; J C Martin; L A Sklar; J A Steinkamp
Journal:  Cytometry       Date:  1995-12-01

7.  Apoptosis induced with different cycle-perturbing agents produces differential changes in the fluorescence lifetime of DNA-bound ethidium bromide.

Authors:  B L Sailer; J G Valdez; J A Steinkamp; H A Crissman
Journal:  Cytometry       Date:  1998-03-01

8.  Fluorescence lifetime-based discrimination and quantification of cellular DNA and RNA with phase-sensitive flow cytometry.

Authors:  H Helen Cui; Joseph G Valdez; John A Steinkamp; Harry A Crissman
Journal:  Cytometry A       Date:  2003-03       Impact factor: 4.355

9.  Digital analysis and sorting of fluorescence lifetime by flow cytometry.

Authors:  Jessica P Houston; Mark A Naivar; James P Freyer
Journal:  Cytometry A       Date:  2010-09       Impact factor: 4.355

10.  Resolution of fluorescence signals from cells labeled with fluorochromes having different lifetimes by phase-sensitive flow cytometry.

Authors:  J A Steinkamp; H A Crissman
Journal:  Cytometry       Date:  1993
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  8 in total

1.  Toward the measurement of multiple fluorescence lifetimes in flow cytometry: maximizing multi-harmonic content from cells and microspheres.

Authors:  Patrick Jenkins; Mark A Naivar; Jessica P Houston
Journal:  J Biophotonics       Date:  2015-02-26       Impact factor: 3.207

2.  Subcellular localization-dependent changes in EGFP fluorescence lifetime measured by time-resolved flow cytometry.

Authors:  Ali Vaziri Gohar; Ruofan Cao; Patrick Jenkins; Wenyan Li; Jessica P Houston; Kevin D Houston
Journal:  Biomed Opt Express       Date:  2013-07-19       Impact factor: 3.732

3.  Phasor plotting with frequency-domain flow cytometry.

Authors:  Ruofan Cao; Patrick Jenkins; William Peria; Bryan Sands; Mark Naivar; Roger Brent; Jessica P Houston
Journal:  Opt Express       Date:  2016-06-27       Impact factor: 3.894

4.  A Review of New High-Throughput Methods Designed for Fluorescence Lifetime Sensing From Cells and Tissues.

Authors:  Aric Bitton; Jesus Sambrano; Samantha Valentino; Jessica P Houston
Journal:  Front Phys       Date:  2021-04-26

5.  Expanding the potential of standard flow cytometry by extracting fluorescence lifetimes from cytometric pulse shifts.

Authors:  Ruofan Cao; Mark A Naivar; Mark Wilder; Jessica P Houston
Journal:  Cytometry A       Date:  2014-10-01       Impact factor: 4.355

6.  Analysis of Flow Cytometric Fluorescence Lifetime with Time-Delay Estimation of Pulse Signals.

Authors:  Lianqing Zhu; Wenchang Zhang; Mingli Dong; Xiaoping Lou
Journal:  Sensors (Basel)       Date:  2018-02-03       Impact factor: 3.576

7.  Evaluating integrin activation with time-resolved flow cytometry.

Authors:  Jesus Sambrano; Alexandre Chigaev; Kapil S Nichani; Yelena Smagley; Larry A Sklar; Jessica P Houston
Journal:  J Biomed Opt       Date:  2018-07       Impact factor: 3.170

8.  Fluorescence lifetime shifts of NAD(P)H during apoptosis measured by time-resolved flow cytometry.

Authors:  Faisal Alturkistany; Kapil Nichani; Kevin D Houston; Jessica P Houston
Journal:  Cytometry A       Date:  2018-10-19       Impact factor: 4.355

  8 in total

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