Literature DB >> 25416289

Genome editing with engineered nucleases in plants.

Yuriko Osakabe1, Keishi Osakabe2.   

Abstract

Numerous examples of successful 'genome editing' now exist. Genome editing uses engineered nucleases as powerful tools to target specific DNA sequences to edit genes precisely in the genomes of both model and crop plants, as well as a variety of other organisms. The DNA-binding domains of zinc finger (ZF) proteins were the first to be used as genome editing tools, in the form of designed ZF nucleases (ZFNs). More recently, transcription activator-like effector nucleases (TALENs), as well as the clustered regularly interspaced short palindromic repeats/Cas9 (CRISPR/Cas9) system, which utilizes RNA-DNA interactions, have proved useful. A key step in genome editing is the generation of a double-stranded DNA break that is specific to the target gene. This is achieved by custom-designed endonucleases, which enable site-directed mutagenesis via a non-homologous end-joining (NHEJ) repair pathway and/or gene targeting via homologous recombination (HR) to occur efficiently at specific sites in the genome. This review provides an overview of recent advances in genome editing technologies in plants, and discusses how these can provide insights into current plant molecular biology research and molecular breeding technology.
© The Author 2014. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Keywords:  CRISPR/Cas9; DSB; Genome editing; TALEN; ZFN

Mesh:

Substances:

Year:  2014        PMID: 25416289     DOI: 10.1093/pcp/pcu170

Source DB:  PubMed          Journal:  Plant Cell Physiol        ISSN: 0032-0781            Impact factor:   4.927


  62 in total

1.  CRISPR/Cas9-mediated efficient editing in phytoene desaturase (PDS) demonstrates precise manipulation in banana cv. Rasthali genome.

Authors:  Navneet Kaur; Anshu Alok; Navjot Kaur; Pankaj Pandey; Praveen Awasthi; Siddharth Tiwari
Journal:  Funct Integr Genomics       Date:  2017-11-29       Impact factor: 3.410

Review 2.  CRISPR/Cas systems: opportunities and challenges for crop breeding.

Authors:  Sukumar Biswas; Dabing Zhang; Jianxin Shi
Journal:  Plant Cell Rep       Date:  2021-05-11       Impact factor: 4.570

Review 3.  Progress of targeted genome modification approaches in higher plants.

Authors:  Teodoro Cardi; C Neal Stewart
Journal:  Plant Cell Rep       Date:  2016-03-29       Impact factor: 4.570

4.  Monitoring single-cell bioluminescence of Arabidopsis leaves to quantitatively evaluate the efficiency of a transiently introduced CRISPR/Cas9 system targeting the circadian clock gene ELF3.

Authors:  Yuki Kanesaka; Masaaki Okada; Shogo Ito; Tokitaka Oyama
Journal:  Plant Biotechnol (Tokyo)       Date:  2019-09-25       Impact factor: 1.133

5.  Comparison of single-trait and multi-trait genomic predictions on agronomic and disease resistance traits in spring wheat.

Authors:  Kassa Semagn; José Crossa; Jaime Cuevas; Muhammad Iqbal; Izabela Ciechanowska; Maria Antonia Henriquez; Harpinder Randhawa; Brian L Beres; Reem Aboukhaddour; Brent D McCallum; Anita L Brûlé-Babel; Amidou N'Diaye; Curtis Pozniak; Dean Spaner
Journal:  Theor Appl Genet       Date:  2022-06-23       Impact factor: 5.574

6.  Cas9 Protein Triggers Differential Expression of Inherent Genes Especially NGFR Expression in 293T Cells.

Authors:  Liqun Chen; Huilian Zhang; Linteng Zhang; Wenbo Li; Fengtian Fan; Xiaoyun Wu; Xueling Wu; Jun Lin
Journal:  Cell Mol Bioeng       Date:  2019-12-02       Impact factor: 2.321

Review 7.  From Mendel's discovery on pea to today's plant genetics and breeding : Commemorating the 150th anniversary of the reading of Mendel's discovery.

Authors:  Petr Smýkal; Rajeev K Varshney; Vikas K Singh; Clarice J Coyne; Claire Domoney; Eduard Kejnovský; Thomas Warkentin
Journal:  Theor Appl Genet       Date:  2016-10-07       Impact factor: 5.699

Review 8.  Improvement of Soybean; A Way Forward Transition from Genetic Engineering to New Plant Breeding Technologies.

Authors:  Saleem Ur Rahman; Evan McCoy; Ghulam Raza; Zahir Ali; Shahid Mansoor; Imran Amin
Journal:  Mol Biotechnol       Date:  2022-02-04       Impact factor: 2.695

9.  Effects of the sliaa9 Mutation on Shoot Elongation Growth of Tomato Cultivars.

Authors:  Chihiro Abe-Hara; Kohji Yamada; Naoki Wada; Risa Ueta; Ryosuke Hashimoto; Keishi Osakabe; Yuriko Osakabe
Journal:  Front Plant Sci       Date:  2021-05-20       Impact factor: 5.753

Review 10.  Progress and Prospects of Anti-HBV Gene Therapy Development.

Authors:  Mohube B Maepa; Ilke Roelofse; Abdullah Ely; Patrick Arbuthnot
Journal:  Int J Mol Sci       Date:  2015-07-31       Impact factor: 5.923

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