Literature DB >> 33977326

CRISPR/Cas systems: opportunities and challenges for crop breeding.

Sukumar Biswas1, Dabing Zhang1, Jianxin Shi2.   

Abstract

Increasing crop production to meet the demands of a growing population depends largely on crop improvement through new plant-breeding techniques (NPBT) such as genome editing. CRISPR/Cas systems are NPBTs that enable efficient target-specific gene editing in crops, which is supposed to accelerate crop breeding in a way that is different from genetically modified (GM) technology. Herein, we review the applications of CRISPR/Cas systems in crop breeding focusing on crop domestication, heterosis, haploid induction, and synthetic biology, and summarize the screening methods of CRISPR/Cas-induced mutations in crops. We highlight the importance of molecular characterization of CRISPR/Cas-edited crops, and pay special attentions to emerging highly specific genome-editing tools such as base editors and prime editors. We also discuss future improvements of CRISPR/Cas systems for crop improvement.

Keywords:  Base editing; CRISPR/Cas9; Crop breeding; Genome editing; Molecular characterization; Prime editing

Year:  2021        PMID: 33977326     DOI: 10.1007/s00299-021-02708-2

Source DB:  PubMed          Journal:  Plant Cell Rep        ISSN: 0721-7714            Impact factor:   4.570


  136 in total

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Authors:  James A Birchler; Hong Yao; Sivanandan Chudalayandi; Daniel Vaiman; Reiner A Veitia
Journal:  Plant Cell       Date:  2010-07-09       Impact factor: 11.277

2.  Trait stacking via targeted genome editing.

Authors:  William M Ainley; Lakshmi Sastry-Dent; Mary E Welter; Michael G Murray; Bryan Zeitler; Rainier Amora; David R Corbin; Rebecca R Miles; Nicole L Arnold; Tonya L Strange; Matthew A Simpson; Zehui Cao; Carley Carroll; Katherine S Pawelczak; Ryan Blue; Kim West; Lynn M Rowland; Douglas Perkins; Pon Samuel; Cristie M Dewes; Liu Shen; Shreedharan Sriram; Steven L Evans; Edward J Rebar; Lei Zhang; Phillip D Gregory; Fyodor D Urnov; Steven R Webb; Joseph F Petolino
Journal:  Plant Biotechnol J       Date:  2013-08-19       Impact factor: 9.803

Review 3.  Enabling plant synthetic biology through genome engineering.

Authors:  Nicholas J Baltes; Daniel F Voytas
Journal:  Trends Biotechnol       Date:  2014-12-12       Impact factor: 19.536

Review 4.  Towards social acceptance of plant breeding by genome editing.

Authors:  Motoko Araki; Tetsuya Ishii
Journal:  Trends Plant Sci       Date:  2015-02-25       Impact factor: 18.313

Review 5.  Genome editing with CRISPR-Cas nucleases, base editors, transposases and prime editors.

Authors:  Andrew V Anzalone; Luke W Koblan; David R Liu
Journal:  Nat Biotechnol       Date:  2020-06-22       Impact factor: 54.908

6.  Nursing management of the head injured patient.

Authors:  J Kunkel
Journal:  Crit Care Update       Date:  1981-03

7.  Development of methods for effective identification of CRISPR/Cas9-induced indels in rice.

Authors:  Sukumar Biswas; Rong Li; Zheng Yuan; Dabing Zhang; Xiangxiang Zhao; Jianxin Shi
Journal:  Plant Cell Rep       Date:  2019-02-19       Impact factor: 4.570

8.  RNA virus interference via CRISPR/Cas13a system in plants.

Authors:  Rashid Aman; Zahir Ali; Haroon Butt; Ahmed Mahas; Fatimah Aljedaani; Muhammad Zuhaib Khan; Shouwei Ding; Magdy Mahfouz
Journal:  Genome Biol       Date:  2018-01-04       Impact factor: 13.583

9.  gRNA validation for wheat genome editing with the CRISPR-Cas9 system.

Authors:  Taj Arndell; Niharika Sharma; Peter Langridge; Ute Baumann; Nathan S Watson-Haigh; Ryan Whitford
Journal:  BMC Biotechnol       Date:  2019-10-30       Impact factor: 2.563

10.  Fusion of the Cas9 endonuclease and the VirD2 relaxase facilitates homology-directed repair for precise genome engineering in rice.

Authors:  Zahir Ali; Ashwag Shami; Khalid Sedeek; Radwa Kamel; Abdulrahman Alhabsi; Muhammad Tehseen; Norhan Hassan; Haroon Butt; Ahad Kababji; Samir M Hamdan; Magdy M Mahfouz
Journal:  Commun Biol       Date:  2020-01-23
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  9 in total

Review 1.  CRISPR/Cas9 Technique for Temperature, Drought, and Salinity Stress Responses.

Authors:  Xiaohan Li; Siyan Xu; Martina Bianca Fuhrmann-Aoyagi; Shaoze Yuan; Takeru Iwama; Misaki Kobayashi; Kenji Miura
Journal:  Curr Issues Mol Biol       Date:  2022-06-08       Impact factor: 2.976

Review 2.  New approaches to improve crop tolerance to biotic and abiotic stresses.

Authors:  Miguel González Guzmán; Francesco Cellini; Vasileios Fotopoulos; Raffaella Balestrini; Vicent Arbona
Journal:  Physiol Plant       Date:  2021-09-17       Impact factor: 5.081

3.  Systematic prediction of EMS-induced mutations in a sorghum mutant population.

Authors:  Jared M Simons; Tim C Herbert; Coleby Kauffman; Marc Y Batete; Andrew T Simpson; Yuka Katsuki; Dong Le; Danielle Amundson; Elizabeth M Buescher; Clifford Weil; Mitch Tuinstra; Charles Addo-Quaye
Journal:  Plant Direct       Date:  2022-05-25

4.  CRISPR innovations in plant breeding.

Authors:  Sang-Gyu Kim
Journal:  Plant Cell Rep       Date:  2021-05-02       Impact factor: 4.570

Review 5.  An Outlook on Global Regulatory Landscape for Genome-Edited Crops.

Authors:  Aftab Ahmad; Nayla Munawar; Zulqurnain Khan; Alaa T Qusmani; Sultan Habibullah Khan; Amer Jamil; Sidra Ashraf; Muhammad Zubair Ghouri; Sabin Aslam; Muhammad Salman Mubarik; Ahmad Munir; Qaiser Sultan; Kamel A Abd-Elsalam; Sameer H Qari
Journal:  Int J Mol Sci       Date:  2021-10-29       Impact factor: 5.923

6.  The future of CRISPR gene editing according to plant scientists.

Authors:  Job de Lange; Lawton Lanier Nalley; Wei Yang; Aaron Shew; Hans de Steur
Journal:  iScience       Date:  2022-08-25

7.  Editing melon eIF4E associates with virus resistance and male sterility.

Authors:  Giuliano S Pechar; Livia Donaire; Blanca Gosalvez; Carlos García-Almodovar; María Amelia Sánchez-Pina; Verónica Truniger; Miguel A Aranda
Journal:  Plant Biotechnol J       Date:  2022-07-25       Impact factor: 13.263

Review 8.  Biotechnological Advances to Improve Abiotic Stress Tolerance in Crops.

Authors:  Miguel Angel Villalobos-López; Analilia Arroyo-Becerra; Anareli Quintero-Jiménez; Gabriel Iturriaga
Journal:  Int J Mol Sci       Date:  2022-10-10       Impact factor: 6.208

9.  Microbe-assisted crop improvement: a sustainable weapon to restore holobiont functionality and resilience.

Authors:  Sandrini Marco; Moffa Loredana; Velasco Riccardo; Balestrini Raffaella; Chitarra Walter; Nerva Luca
Journal:  Hortic Res       Date:  2022-03-01       Impact factor: 7.291

  9 in total

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