Literature DB >> 25408404

Efficient design and assembly of custom TALENs using the Golden Gate platform.

Tomas Cermak1, Colby G Starker, Daniel F Voytas.   

Abstract

An important breakthrough in the field of genome engineering was the discovery of the modular Transcription Activator-Like Effector (TALE) DNA binding domain and the development of TALE nucleases (TALENs). TALENs enable researchers to make DNA double-strand breaks in target loci to create gene knockouts or introduce specific DNA sequence modifications. Precise genome engineering is increasingly being used to study gene function, develop disease models or create new traits in crop species. Underlying the boom in genome engineering is the striking simplicity and low cost of engineering new specificities of TALENs and other sequence-specific nucleases. In this chapter, we describe a rapid, inexpensive, and user-friendly protocol for custom TALEN construction based on one of the most popular TALEN assembly platforms, the Golden Gate cloning method. Using this protocol, ready-to-use TALENs with specificity for targets 13-32 bp long are constructed within 5 days.

Mesh:

Substances:

Year:  2015        PMID: 25408404     DOI: 10.1007/978-1-4939-1862-1_7

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  17 in total

1.  Genome editing technologies: defining a path to clinic.

Authors:  Jacqueline Corrigan-Curay; Marina O'Reilly; Donald B Kohn; Paula M Cannon; Gang Bao; Frederic D Bushman; Dana Carroll; Toni Cathomen; J Keith Joung; David Roth; Michel Sadelain; Andrew M Scharenberg; Christof von Kalle; Feng Zhang; Robert Jambou; Eugene Rosenthal; Morad Hassani; Aparna Singh; Matthew H Porteus
Journal:  Mol Ther       Date:  2015-05       Impact factor: 11.454

2.  Injury-induced ctgfa directs glial bridging and spinal cord regeneration in zebrafish.

Authors:  Mayssa H Mokalled; Chinmoy Patra; Amy L Dickson; Toyokazu Endo; Didier Y R Stainier; Kenneth D Poss
Journal:  Science       Date:  2016-11-04       Impact factor: 47.728

3.  Dusp6 attenuates Ras/MAPK signaling to limit zebrafish heart regeneration.

Authors:  Maria A Missinato; Manush Saydmohammed; Daniel A Zuppo; Krithika S Rao; Graham W Opie; Bernhard Kühn; Michael Tsang
Journal:  Development       Date:  2018-03-06       Impact factor: 6.868

Review 4.  TALEN gene editing takes aim on HIV.

Authors:  Ronald Benjamin; Bradford K Berges; Antonio Solis-Leal; Omoyemwen Igbinedion; Christy L Strong; Martin R Schiller
Journal:  Hum Genet       Date:  2016-05-12       Impact factor: 4.132

Review 5.  A history of genome editing in mammals.

Authors:  Almudena Fernández; Santiago Josa; Lluis Montoliu
Journal:  Mamm Genome       Date:  2017-06-06       Impact factor: 2.957

6.  CRISPR/Cas9-mediated targeted mutagenesis in upland cotton (Gossypium hirsutum L.).

Authors:  Madhusudhana R Janga; LeAnne M Campbell; Keerti S Rathore
Journal:  Plant Mol Biol       Date:  2017-03-03       Impact factor: 4.076

7.  CRISPR/Cas9-Mediated Mutagenesis of the Granule-Bound Starch Synthase Gene in the Potato Variety Yukon Gold to Obtain Amylose-Free Starch in Tubers.

Authors:  Stephany Toinga-Villafuerte; Maria Isabel Vales; Joseph M Awika; Keerti S Rathore
Journal:  Int J Mol Sci       Date:  2022-04-22       Impact factor: 6.208

8.  The Physiological Characterization of Connexin41.8 and Connexin39.4, Which Are Involved in the Striped Pattern Formation of Zebrafish.

Authors:  Masakatsu Watanabe; Risa Sawada; Toshihiro Aramaki; I Martha Skerrett; Shigeru Kondo
Journal:  J Biol Chem       Date:  2015-11-23       Impact factor: 5.157

Review 9.  Genome Editing and Its Applications in Model Organisms.

Authors:  Dongyuan Ma; Feng Liu
Journal:  Genomics Proteomics Bioinformatics       Date:  2016-01-04       Impact factor: 7.691

10.  Genomics Approaches For Improving Salinity Stress Tolerance in Crop Plants.

Authors:  Ramsong Chantre Nongpiur; Sneh Lata Singla-Pareek; Ashwani Pareek
Journal:  Curr Genomics       Date:  2016-08       Impact factor: 2.236

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