Literature DB >> 28589393

A history of genome editing in mammals.

Almudena Fernández1,2, Santiago Josa1,2, Lluis Montoliu3,4.   

Abstract

Genome editing is now a routine procedure in many mammalian genetics laboratories. The ostensibly short but intense history of genome-editing approaches illustrates how a disruptive technology can universally colonize a field when this new methodology, conceived to alter mammalian genomes at specific locations, is found to efficiently and robustly deliver results. This review summarizes the early development of genome editing using nucleases, from the pioneering experiments using yeast meganucleases, to the latest prokaryotic nucleases used for precise genome manipulation. Gene-editing nucleases belong to one of three known categories: zinc-finger nucleases (ZFN), transcription activator-like effector nucleases (TALEN), and clustered regularly interspaced short palindromic repeats (CRISPR) and their associated proteins (Cas) tools. All operate on the same principle; they are all capable of inducing a double-strand break (DSB) at a defined genomic sequence that is subsequently corrected by endogenous DNA repair mechanisms. DSBs can be repaired through non-homologous end joining (NHEJ), resulting in small insertions and/or deletions (INDELs) and, hence, often leading to gene disruption. Alternatively, DSBs can be repaired through homology-driven repair (HDR), in the presence of donor homologous DNA sequences, resulting in gene-editing events.

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Year:  2017        PMID: 28589393     DOI: 10.1007/s00335-017-9699-2

Source DB:  PubMed          Journal:  Mamm Genome        ISSN: 0938-8990            Impact factor:   2.957


  114 in total

1.  Targeted genome modification in mice using zinc-finger nucleases.

Authors:  Iara D Carbery; Diana Ji; Anne Harrington; Victoria Brown; Edward J Weinstein; Lucy Liaw; Xiaoxia Cui
Journal:  Genetics       Date:  2010-07-13       Impact factor: 4.562

2.  In vivo genome editing improves muscle function in a mouse model of Duchenne muscular dystrophy.

Authors:  Christopher E Nelson; Chady H Hakim; David G Ousterout; Pratiksha I Thakore; Eirik A Moreb; Ruth M Castellanos Rivera; Sarina Madhavan; Xiufang Pan; F Ann Ran; Winston X Yan; Aravind Asokan; Feng Zhang; Dongsheng Duan; Charles A Gersbach
Journal:  Science       Date:  2015-12-31       Impact factor: 47.728

3.  Highly efficient endogenous human gene correction using designed zinc-finger nucleases.

Authors:  Fyodor D Urnov; Jeffrey C Miller; Ya-Li Lee; Christian M Beausejour; Jeremy M Rock; Sheldon Augustus; Andrew C Jamieson; Matthew H Porteus; Philip D Gregory; Michael C Holmes
Journal:  Nature       Date:  2005-04-03       Impact factor: 49.962

4.  TALEN-based gene correction for epidermolysis bullosa.

Authors:  Mark J Osborn; Colby G Starker; Amber N McElroy; Beau R Webber; Megan J Riddle; Lily Xia; Anthony P DeFeo; Richard Gabriel; Manfred Schmidt; Christof von Kalle; Daniel F Carlson; Morgan L Maeder; J Keith Joung; John E Wagner; Daniel F Voytas; Bruce R Blazar; Jakub Tolar
Journal:  Mol Ther       Date:  2013-04-02       Impact factor: 11.454

5.  TALE nickase-mediated SP110 knockin endows cattle with increased resistance to tuberculosis.

Authors:  Haibo Wu; Yongsheng Wang; Yan Zhang; Mingqi Yang; Jiaxing Lv; Jun Liu; Yong Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-02       Impact factor: 11.205

6.  Gene editing of CCR5 in autologous CD4 T cells of persons infected with HIV.

Authors:  Pablo Tebas; David Stein; Winson W Tang; Ian Frank; Shelley Q Wang; Gary Lee; S Kaye Spratt; Richard T Surosky; Martin A Giedlin; Geoff Nichol; Michael C Holmes; Philip D Gregory; Dale G Ando; Michael Kalos; Ronald G Collman; Gwendolyn Binder-Scholl; Gabriela Plesa; Wei-Ting Hwang; Bruce L Levine; Carl H June
Journal:  N Engl J Med       Date:  2014-03-06       Impact factor: 91.245

7.  Generation of Knock-In Pigs Carrying Oct4-tdTomato Reporter through CRISPR/Cas9-Mediated Genome Engineering.

Authors:  Sisi Lai; Shu Wei; Bentian Zhao; Zhen Ouyang; Quanjun Zhang; Nana Fan; Zhaoming Liu; Yu Zhao; Quanmei Yan; Xiaoqing Zhou; Li Li; Jige Xin; Yangzhi Zeng; Liangxue Lai; Qingjian Zou
Journal:  PLoS One       Date:  2016-01-12       Impact factor: 3.240

8.  Efficient introgression of allelic variants by embryo-mediated editing of the bovine genome.

Authors:  Jingwei Wei; Stefan Wagner; Dan Lu; Paul Maclean; Daniel F Carlson; Scott C Fahrenkrug; Götz Laible
Journal:  Sci Rep       Date:  2015-07-09       Impact factor: 4.379

9.  Efficient and rapid generation of large genomic variants in rats and mice using CRISMERE.

Authors:  Marie-Christine Birling; Laurence Schaeffer; Philippe André; Loic Lindner; Damien Maréchal; Abdel Ayadi; Tania Sorg; Guillaume Pavlovic; Yann Hérault
Journal:  Sci Rep       Date:  2017-03-07       Impact factor: 4.379

10.  Generation of a High Number of Healthy Erythroid Cells from Gene-Edited Pyruvate Kinase Deficiency Patient-Specific Induced Pluripotent Stem Cells.

Authors:  Zita Garate; Oscar Quintana-Bustamante; Ana M Crane; Emmanuel Olivier; Laurent Poirot; Roman Galetto; Penelope Kosinski; Collin Hill; Charles Kung; Xabi Agirre; Israel Orman; Laura Cerrato; Omaira Alberquilla; Fatima Rodriguez-Fornes; Noemi Fusaki; Felix Garcia-Sanchez; Tabita M Maia; Maria L Ribeiro; Julian Sevilla; Felipe Prosper; Shengfang Jin; Joanne Mountford; Guillermo Guenechea; Agnes Gouble; Juan A Bueren; Brian R Davis; Jose C Segovia
Journal:  Stem Cell Reports       Date:  2015-11-05       Impact factor: 7.765

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  8 in total

Review 1.  High-throughput mouse phenomics for characterizing mammalian gene function.

Authors:  Steve D M Brown; Chris C Holmes; Ann-Marie Mallon; Terrence F Meehan; Damian Smedley; Sara Wells
Journal:  Nat Rev Genet       Date:  2018-06       Impact factor: 53.242

2.  Historical DNA Manipulation Overview.

Authors:  Lluis Montoliu
Journal:  Methods Mol Biol       Date:  2022

Review 3.  Application of genome-editing systems to enhance available pig resources for agriculture and biomedicine.

Authors:  Kiho Lee; Kayla Farrell; Kyungjun Uh
Journal:  Reprod Fertil Dev       Date:  2019-01       Impact factor: 2.311

Review 4.  Animal models of arrhythmia: classic electrophysiology to genetically modified large animals.

Authors:  Sebastian Clauss; Christina Bleyer; Dominik Schüttler; Philipp Tomsits; Simone Renner; Nikolai Klymiuk; Reza Wakili; Steffen Massberg; Eckhard Wolf; Stefan Kääb
Journal:  Nat Rev Cardiol       Date:  2019-08       Impact factor: 32.419

Review 5.  Delivering on the promise of gene editing for cystic fibrosis.

Authors:  Craig A Hodges; Ronald A Conlon
Journal:  Genes Dis       Date:  2018-11-25

6.  Bindel-PCR: a novel and convenient method for identifying CRISPR/Cas9-induced biallelic mutants through modified PCR using Thermus aquaticus DNA polymerase.

Authors:  Takayuki Sakurai; Akiko Kamiyoshi; Norio Takei; Satoshi Watanabe; Masahiro Sato; Takayuki Shindo
Journal:  Sci Rep       Date:  2019-07-09       Impact factor: 4.379

7.  Genetic quality assurance and genetic monitoring of laboratory mice and rats: FELASA Working Group Report.

Authors:  Fernando Benavides; Thomas Rülicke; Jan-Bas Prins; James Bussell; Ferdinando Scavizzi; Paolo Cinelli; Yann Herault; Dirk Wedekind
Journal:  Lab Anim       Date:  2019-08-20       Impact factor: 2.471

Review 8.  Genome editing via non-viral delivery platforms: current progress in personalized cancer therapy.

Authors:  Tianxia Lan; Haiying Que; Min Luo; Xia Zhao; Xiawei Wei
Journal:  Mol Cancer       Date:  2022-03-11       Impact factor: 27.401

  8 in total

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