Literature DB >> 25400297

Rationally Designed Macrocyclic Peptides as Synergistic Agonists of LPS-Induced Inflammatory Response.

Meng Gao1, Nir London2, Kui Cheng3, Ryo Tamura3, Jialin Jin1, Ora Schueler-Furman2, Hang Yin1,3.   

Abstract

Toll-like receptor 4 (TLR4) plays an important role in the regulation of the innate and adaptive immune response. Both agonists and antagonists of TLR4 are of considerable interest as drug leads for various disease indications. We herein report the rational design of two myeloid differentiation factor 2 (MD2)-derived macrocyclic peptides as TLR4 modulators, using the Rosetta Macromolecular Modeling software. The designed cyclic peptides, but not their linear counterparts, displayed synergistic activation of TLR signaling when co-administered with lipopolysaccharide (LPS). Although the understanding of the mechanism of action of these peptides remains elusive; these results underscore the utility of peptide cyclization for the discovery of biologically active agents, and also lead to valuable tools for the investigation of TLR4 signaling.

Entities:  

Keywords:  Computer design; Drug synergy; Macrocyclic peptide; Myeloid differentiation factor 2; Toll-like receptor 4

Year:  2014        PMID: 25400297      PMCID: PMC4228380          DOI: 10.1016/j.tet.2014.07.026

Source DB:  PubMed          Journal:  Tetrahedron        ISSN: 0040-4020            Impact factor:   2.457


  26 in total

1.  Native protein sequences are close to optimal for their structures.

Authors:  B Kuhlman; D Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2000-09-12       Impact factor: 11.205

2.  Algorithm discovery by protein folding game players.

Authors:  Firas Khatib; Seth Cooper; Michael D Tyka; Kefan Xu; Ilya Makedon; Zoran Popovic; David Baker; Foldit Players
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-07       Impact factor: 11.205

3.  Rapid solid-phase synthesis of a calmodulin-binding peptide using controlled microwave irradiation.

Authors:  Bernadett Bacsa; C Oliver Kappe
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

4.  Can self-inhibitory peptides be derived from the interfaces of globular protein-protein interactions?

Authors:  Nir London; Barak Raveh; Dana Movshovitz-Attias; Ora Schueler-Furman
Journal:  Proteins       Date:  2010-11-15

5.  Selection, Preparation, and Evaluation of Small- Molecule Inhibitors of Toll-Like Receptor 4.

Authors:  Douglas E Bevan; Alexander J Martinko; Lisa C Loram; Joshua A Stahl; Frederick R Taylor; Sampada Joshee; Linda R Watkins; Hang Yin
Journal:  ACS Med Chem Lett       Date:  2010-04-12       Impact factor: 4.345

6.  A peptide antagonist of the TLR4-MD2 interaction.

Authors:  Peter F Slivka; Mitesh Shridhar; Gui-in Lee; Deanne W Sammond; Mark R Hutchinson; Alexander J Martinko; Madison M Buchanan; Page W Sholar; Jeffrey J Kearney; Jacqueline A Harrison; Linda R Watkins; Hang Yin
Journal:  Chembiochem       Date:  2009-03-02       Impact factor: 3.164

7.  Macrophage nitric oxide synthase gene: two upstream regions mediate induction by interferon gamma and lipopolysaccharide.

Authors:  C J Lowenstein; E W Alley; P Raval; A M Snowman; S H Snyder; S W Russell; W J Murphy
Journal:  Proc Natl Acad Sci U S A       Date:  1993-10-15       Impact factor: 11.205

Review 8.  Targeting Toll-like receptors with small molecule agents.

Authors:  Xiaohui Wang; Christina Smith; Hang Yin
Journal:  Chem Soc Rev       Date:  2013-06-21       Impact factor: 54.564

Review 9.  Toll-like receptor 4 activation in cancer progression and therapy.

Authors:  Alja Oblak; Roman Jerala
Journal:  Clin Dev Immunol       Date:  2011-11-03

10.  MD-2, a molecule that confers lipopolysaccharide responsiveness on Toll-like receptor 4.

Authors:  R Shimazu; S Akashi; H Ogata; Y Nagai; K Fukudome; K Miyake; M Kimoto
Journal:  J Exp Med       Date:  1999-06-07       Impact factor: 14.307

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  7 in total

Review 1.  Targeting protein-protein interfaces using macrocyclic peptides.

Authors:  Meng Gao; Kui Cheng; Hang Yin
Journal:  Biopolymers       Date:  2015-07       Impact factor: 2.505

Review 2.  Therapeutic Developments Targeting Toll-like Receptor-4-Mediated Neuroinflammation.

Authors:  Jing Li; Adam Csakai; Jialin Jin; Fengchun Zhang; Hang Yin
Journal:  ChemMedChem       Date:  2015-07-01       Impact factor: 3.466

3.  Soluble amyloid triggers a myeloid differentiation factor 88 and interferon regulatory factor 7 dependent neuronal type-1 interferon response in vitro.

Authors:  Myles Robert Minter; Bevan Scott Main; Kate Maree Brody; Moses Zhang; Juliet Marie Taylor; Peter John Crack
Journal:  J Neuroinflammation       Date:  2015-04-12       Impact factor: 8.322

Review 4.  Macrocyclic Compounds for Drug and Gene Delivery in Immune-Modulating Therapy.

Authors:  Hongzhen Bai; Jianwei Wang; Zhongbao Li; Guping Tang
Journal:  Int J Mol Sci       Date:  2019-04-28       Impact factor: 5.923

5.  Enhancing the promiscuity of a member of the Caspase protease family by rational design.

Authors:  Christoph Öhlknecht; Drazen Petrov; Petra Engele; Christina Kröß; Bernhard Sprenger; Andreas Fischer; Nico Lingg; Rainer Schneider; Chris Oostenbrink
Journal:  Proteins       Date:  2020-06-11

6.  Intestinal Alkaline Phosphatase: Potential Roles in Promoting Gut Health in Weanling Piglets and Its Modulation by Feed Additives - A Review.

Authors:  A D B Melo; H Silveira; F B Luciano; C Andrade; L B Costa; M H Rostagno
Journal:  Asian-Australas J Anim Sci       Date:  2016-01       Impact factor: 2.509

7.  Peptiderive server: derive peptide inhibitors from protein-protein interactions.

Authors:  Yuval Sedan; Orly Marcu; Sergey Lyskov; Ora Schueler-Furman
Journal:  Nucleic Acids Res       Date:  2016-05-03       Impact factor: 16.971

  7 in total

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