Literature DB >> 25399640

Catalytic mechanisms and regulation of protein kinases.

Zhihong Wang1, Philip A Cole2.   

Abstract

Protein kinases transfer a phosphoryl group from ATP onto target proteins and play a critical role in signal transduction and other cellular processes. Here, we review the kinase kinetic and chemical mechanisms and their application in understanding kinase structure and function. Aberrant kinase activity has been implicated in many human diseases, in particular cancer. We highlight applications of technologies and concepts derived from kinase mechanistic studies that have helped illuminate how kinases are regulated and contribute to pathophysiology.

Entities:  

Keywords:  B-Raf; Bisubstrate analog; Chemical rescue; EGFR; Erlotinib; Inhibitor; Lapatinib; Src; Transition state

Mesh:

Substances:

Year:  2014        PMID: 25399640      PMCID: PMC4373616          DOI: 10.1016/B978-0-12-397918-6.00001-X

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  84 in total

1.  Chemical rescue of a mutant enzyme in living cells.

Authors:  Yingfeng Qiao; Henrik Molina; Akhilesh Pandey; Jin Zhang; Philip A Cole
Journal:  Science       Date:  2006-03-03       Impact factor: 47.728

2.  Wild-type and mutant B-RAF activate C-RAF through distinct mechanisms involving heterodimerization.

Authors:  Mathew J Garnett; Sareena Rana; Hugh Paterson; David Barford; Richard Marais
Journal:  Mol Cell       Date:  2005-12-22       Impact factor: 17.970

3.  Expanding the genetic code of Escherichia coli with phosphoserine.

Authors:  Hee-Sung Park; Michael J Hohn; Takuya Umehara; Li-Tao Guo; Edith M Osborne; Jack Benner; Christopher J Noren; Jesse Rinehart; Dieter Söll
Journal:  Science       Date:  2011-08-26       Impact factor: 47.728

4.  Imidazole-induced cell death, associated with intracellular acidification, caspase-3 activation, DFF-45 cleavage, but not oligonucleosomal DNA fragmentation.

Authors:  K Iguchi; S Usui; R Ishida; K Hirano
Journal:  Apoptosis       Date:  2002-12       Impact factor: 4.677

5.  Probing the catalytic mechanism of the insulin receptor kinase with a tetrafluorotyrosine-containing peptide substrate.

Authors:  A J Ablooglu; J H Till; K Kim; K Parang; P A Cole; S R Hubbard; R A Kohanski
Journal:  J Biol Chem       Date:  2000-09-29       Impact factor: 5.157

6.  The RAF inhibitor PLX4032 inhibits ERK signaling and tumor cell proliferation in a V600E BRAF-selective manner.

Authors:  Eric W Joseph; Christine A Pratilas; Poulikos I Poulikakos; Madhavi Tadi; Weiqing Wang; Barry S Taylor; Ensar Halilovic; Yogindra Persaud; Feng Xing; Agnes Viale; James Tsai; Paul B Chapman; Gideon Bollag; David B Solit; Neal Rosen
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-28       Impact factor: 11.205

Review 7.  Raf proteins and cancer: B-Raf is identified as a mutational target.

Authors:  Kathryn E Mercer; Catrin A Pritchard
Journal:  Biochim Biophys Acta       Date:  2003-06-05

8.  Expressed protein ligation: a general method for protein engineering.

Authors:  T W Muir; D Sondhi; P A Cole
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

9.  Mechanistic insights into the activation of oncogenic forms of EGF receptor.

Authors:  Zhihong Wang; Patti A Longo; Mary Katherine Tarrant; Kwangsoo Kim; Sarah Head; Daniel J Leahy; Philip A Cole
Journal:  Nat Struct Mol Biol       Date:  2011-11-20       Impact factor: 15.369

10.  Bio-orthogonal affinity purification of direct kinase substrates.

Authors:  Jasmina J Allen; Scott E Lazerwith; Kevan M Shokat
Journal:  J Am Chem Soc       Date:  2005-04-20       Impact factor: 15.419

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  37 in total

1.  Allosteric Effect of Adenosine Triphosphate on Peptide Recognition by 3'5'-Cyclic Adenosine Monophosphate Dependent Protein Kinase Catalytic Subunits.

Authors:  Rait Kivi; Karina Solovjova; Tõiv Haljasorg; Piret Arukuusk; Jaak Järv
Journal:  Protein J       Date:  2016-12       Impact factor: 2.371

2.  Long-range molecular dynamics show that inactive forms of Protein Kinase A are more dynamic than active forms.

Authors:  R Kalaivani; T J Narwani; A G de Brevern; N Srinivasan
Journal:  Protein Sci       Date:  2018-12-30       Impact factor: 6.725

3.  PP2A Inhibits Cervical Cancer Cell Migration by Dephosphorylation of p-JNK, p-p38 and the p-ERK/MAPK Signaling Pathway.

Authors:  Hong-Yun Zheng; Fu-Jin Shen; Yong-Qing Tong; Yan Li
Journal:  Curr Med Sci       Date:  2018-03-15

Review 4.  Systemic Therapy for Advanced Hepatocellular Carcinoma: An Update of a Rapidly Evolving Field.

Authors:  Iliana Doycheva; Paul J Thuluvath
Journal:  J Clin Exp Hepatol       Date:  2019-08-02

Review 5.  AKTivation mechanisms.

Authors:  Philip A Cole; Nam Chu; Antonieta L Salguero; Hwan Bae
Journal:  Curr Opin Struct Biol       Date:  2019-03-20       Impact factor: 6.809

Review 6.  Synthetic approaches to protein phosphorylation.

Authors:  Zan Chen; Philip A Cole
Journal:  Curr Opin Chem Biol       Date:  2015-07-18       Impact factor: 8.822

Review 7.  Diacylglycerol kinases: Relationship to other lipid kinases.

Authors:  Qianqian Ma; Sandra B Gabelli; Daniel M Raben
Journal:  Adv Biol Regul       Date:  2018-09-28

8.  Analysis of Cellular Tyrosine Phosphorylation via Chemical Rescue of Conditionally Active Abl Kinase.

Authors:  Zhihong Wang; Min-Sik Kim; Isabel Martinez-Ferrando; Anthony J Koleske; Akhilesh Pandey; Philip A Cole
Journal:  Biochemistry       Date:  2018-02-06       Impact factor: 3.162

Review 9.  From ATP to PTP and Back: A Dual Function for the Mitochondrial ATP Synthase.

Authors:  Paolo Bernardi; Fabio Di Lisa; Federico Fogolari; Giovanna Lippe
Journal:  Circ Res       Date:  2015-05-22       Impact factor: 17.367

Review 10.  Getting the Message? Native Reactive Electrophiles Pass Two Out of Three Thresholds to be Bona Fide Signaling Mediators.

Authors:  Jesse R Poganik; Marcus J C Long; Yimon Aye
Journal:  Bioessays       Date:  2018-03-30       Impact factor: 4.345

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