| Literature DB >> 25371343 |
Ali Tahrioui1, Melanie Schwab2, Emilia Quesada3, Inmaculada Llamas4.
Abstract
Cell-to-cell communication, or quorum-sensing (QS), systems are employed by bacteria for promoting collective behaviour within a population. An analysis to detect QS signal molecules in 43 species of the Halomonadaceae family revealed that they produced N-acyl homoserine lactones (AHLs), which suggests that the QS system is widespread throughout this group of bacteria. Thin-layer chromatography (TLC) analysis of crude AHL extracts, using Agrobacterium tumefaciens NTL4 (pZLR4) as biosensor strain, resulted in different profiles, which were not related to the various habitats of the species in question. To confirm AHL production in the Halomonadaceae species, PCR and DNA sequencing approaches were used to study the distribution of the luxI-type synthase gene. Phylogenetic analysis using sequence data revealed that 29 of the species studied contained a LuxI homolog. Phylogenetic analysis showed that sequences from Halomonadaceae species grouped together and were distinct from other members of the Gammaproteobacteria and also from species belonging to the Alphaproteobacteria and Betaproteobacteria.Entities:
Year: 2013 PMID: 25371343 PMCID: PMC4187203 DOI: 10.3390/life3010260
Source DB: PubMed Journal: Life (Basel) ISSN: 2075-1729
Species of the Halomonadaceae family included in this study [9].
| Species | Strain | Ecological Niches |
|---|---|---|
| 1. | CTCBS1T | Cured meat, Spain |
| 2. | DSM 3043T | Solar saltern, Netherlands |
| 3. | 219T | Sea water, USA |
| 4. | YKJ-16T | Jeotgal, a traditional Korean fermented seafood, Korea |
| 5. | M8T | Solar saltern, south-east Spain |
| 6. | FP35T | Saline wetland, southern Spain |
| 7. | 558T | Pacific ocean |
| 8. | 5AGT | Mineral pool, Italy |
| 9. | SP4T | Saline soil, Spain |
| 10. | M29T | Saline water, Korea |
| 11. | FB2T | Municipal sewage works, Germany |
| 12. | 1H9T | Solar saltern, Netherlands |
| 13. | F9-6T | Saline soil, Spain |
| 14. | CR-5T | Saline soil, southern Spain |
| 15. | SL014B-69T | Saline soil contaminated by crude oil, China |
| 16. | ACAM 71T | Dead Sea, Israel |
| 17. | ATCC 13511T | Meat in brine |
| 18. | DSM 5160T | Great Bay estuary, USA |
| 19. | SS20T | Solar saltern, Korea |
| 20. | 21 MIT | Soda lake, East-African Rift Valley |
| 21. | S-31T | Saltern, Morocco |
| 22. | ACAM 246T | Saline lake, Antarctic |
| 23. | Z-7009T | Soda lake, Mongolia |
| 24. | 11-ST | Solar saltern, Chile |
| 25. | G-16.1T | Hypersaline habitats contaminated by aromatic organic compounds, southern Spain |
| 26. | DSM 4742T | Pacific ocean |
| 27. | AAPT | Hard lake sand, Pantelleria island, Italy |
| 28. | RS-16T | Saline soil, south-east Spain |
| 29. | HK-31T | Solar saltern, Morocco |
| 30. | AJ275T | Salt lake and a subterranean saline well, China |
| 31. | F8-11T | Saline soil, Spain |
| 32. | SLO14B-85T | Saline soil contaminated with crude oil, China |
| 33. | N12T | Saline soil, Spain |
| 34. | ACAM 12T | Antarctic hypersaline, meromictic lake |
| 35. | DSM 3051T | Great Salt Lake, USA |
| 36. | Al-12T | Saline soil, south-eastern Spain |
| 37. | AW-7T | Alkaline olive-mill waste (alpechin), Greece |
| 38. | MW2aT | Salty leaves of |
| 39. | CG2.1T | Solar saltern, south-east Spain |
| 40. | SW32T | Water from the Yellow Sea, Korea |
| 41. | LIT2T | Oilfield-water injection sample, southern Tunisia |
| 42. | CG4.1T | Solar saltern, south-east Spain |
| 43. | M27T | Saline water, Korea |
Note: Species shaded in grey indicates that the LuxI homolog has been detected by PCR.
Figure 1N-acyl homoserine lactone (AHL) production by Halomonas salina F8-11T, H. eurihalina F9-6T, H. pacifica DSM 4742T and H. variabilis DSM 3051T. A volume of 5µL of AHLs previously extracted from the bacterial cultures were visualized on agar plate diffusion assay by means of the indicator strain A. tumefaciens NTL4 (pZLR4).
Figure 2Thin-layer chromatography (TLC) analysis of the AHLs produced by the 43 species of Halomonadaceae: lane 1, Carnimonas nigrificans CTCBS1T, lane 2, Chromohalobacter salexigens DSM3043T; lane 3, Cobetia marina 219T; lane 4, Halomonas alimentaria YKJ-16T; lane 5, H. almeriensis M8T; lane 6, H. anticariensis FP35T; lane 7, H. aquamarina 558T; lane 8, H. campaniensis 5AGT; lane 9, H. cerina SP4T; lane 10, H. denitrificans M29T; lane 11, H. desiderata FB2T; lane 12, H. elongata 1H9T; lane 13, H. eurihalina F9-6T, lane 14, H. fontilapidosi 5CRT, lane 15, H. gudaonensis SL014B-69T; lane 16, H. halmophila ACAM 71T; lane 17, H. halodenitrificans ATCC 13511T; lane 18, H. halodurans DSM 5160T; lane 19, H. koreensis SS20T; lane 20, H. magadiensis 21 MIT; lane 21, H. maura S-31T; lane 22, H. meridiana ACAM 246T; lane 23, H. mongoliensis Z-7009T; lane 24, H. nitroreducens 11-ST; lane 25, H. organivorans G-16.1T; lane 26, H. pacifica DSM 4742T; lane 27, H. pantelleriensis AAPT; lane 28, H. ramblicola RS-16T; lane 29, H. rifensis HK31T; lane 30, H. saccharevitans AJ275T; lane 31, H. salina F8-11T; lane 32, H. shengliensis SL014B-85T; lane 33, H. stenophila N12T; lane 34, H. subglaciescola ACAM 12T; lane 35, H. variabilis DSM 3051T; lane 36, H. ventosae Al-12T, lane 37, Halotalea alkalilenta AW-7T; lane 38, Kushneria avicenniae MW2aT; lane 39, K. indalinina CG2.1T; lane 40, K. marisflavi SW32T; lane 41, Modicisalibacter tunisiensis LIT2T; lane 42, Salinicola halophilus CG4.1T; lane 43, S. salarius M27T. Each lane contains 10 µL of AHL crude extract except for lanes 6 and 29, which contain 5 µL. Lane S; synthetic AHL standards: oxo-C6-HSL (4.7 pmol), C6-HSL (804 pmol), C8-HSL (31.6 pmol), C10-HSL (2 nmol), C12-HSL (4.8 nmol).
Figure 3Phylogenetic trees based on LuxI sequences (a) and 16S rDNA sequences (b) found in some members of Alphaproteobacteria, Betaproteobacteria and Gammaproteobacteria, including the species studied here belonging to the Halomonadaceae family. Abbreviations for bacterial genus names: A, Aliivibrio; Ac, Acidithiobacillus; Ae, Aeromonas; Ag, Agrobacterium; Az, Azospirillium; B, Burkholderia; Car, Carnimonas; C, Chromobacterium; Er, Erwinia; En, Enterobacter; H, Halomonas; Halot, Halotalea; K, Kushneria; M, Modicisalibacter; Me, Mesorhizobium; Ps, Pseudomonas; Rh, Rhizobium; Ra, Ralstonia; Rho, Rhodobacter; Si, Sinorhizobium; S, Salinicola; Se, Serratia; V, Vibrio; Y, Yersinia. The scale bar indicates the mean number of substitutions per site. Bootstrap values were obtained from 1,000 replicates via neighbour-joining algorithms using the MEGA program. Only branches with values >50% are shown. The branches highlighted in red are sequences from Alphaproteobacteria, in green from Betaproteobacteria and in blue from Gammaproteobacteria. The sequence accession numbers are given in brackets.